Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 8.3e-209 730.3 423 100.0
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.9e-205 719.2 428 98.6
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 9.5e-205 716.8 426 97.2
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 4.1e-184 648.3 427 85.2
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.7e-183 645.6 398 94.0
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 1.4e-179 633.3 427 82.4
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 2.6e-162 575.9 342 84.8
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 5.6e-149 531.6 370 73.8
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 2.2e-145 519.6 371 71.7
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.2e-145 519.6 365 72.6
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.1e-144 517.3 394 69.5
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 4.8e-140 501.9 367 70.8
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.1e-139 500.7 370 70.5
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 4.1e-139 498.8 346 74.3
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 9.0e-139 497.7 360 69.7
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 7.6e-138 494.6 361 69.8
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 1.3e-137 493.8 362 70.4
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.3e-137 493.8 344 74.4
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 3.8e-137 492.3 348 71.3
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 3.8e-137 492.3 362 69.9
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.4e-136 490.3 362 69.3
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 5.5e-136 488.4 347 72.3
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 3.6e-135 485.7 396 64.4
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 6.1e-135 485.0 349 70.8
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.0e-134 484.2 369 68.0
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.8e-134 483.4 369 67.8
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 2.3e-134 483.0 366 69.7
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 3.9e-134 482.3 370 67.0
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 3.9e-134 482.3 369 68.3
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 5.1e-134 481.9 367 67.6
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.1e-134 481.9 369 68.0
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 6.7e-134 481.5 368 67.9
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 1.9e-133 479.9 366 67.8
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 1.9e-133 479.9 354 70.6
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 5.7e-133 478.4 367 68.1
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 3.7e-132 475.7 365 67.9
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 3.7e-132 475.7 366 69.1
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 6.3e-132 474.9 359 68.5
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.1e-131 474.2 366 66.4
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 1.4e-131 473.8 359 68.8
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.4e-131 473.8 345 71.6
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 2.4e-131 473.0 370 66.2
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 2.4e-131 473.0 368 66.0
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 2.4e-131 473.0 345 71.0
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 3.1e-131 472.6 366 66.9
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 4.1e-131 472.2 366 67.8
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 6.9e-131 471.5 370 66.2
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 2.0e-130 469.9 367 68.1
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 2.6e-130 469.5 345 71.0
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.6e-130 469.5 348 70.1
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 3.4e-130 469.2 348 70.1
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 3.4e-130 469.2 420 60.0
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 5.9e-130 468.4 438 58.9
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 7.7e-130 468.0 354 66.7
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.0e-129 467.6 370 65.9
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 1.3e-129 467.2 345 70.7
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.7e-129 466.8 348 69.5
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 8.5e-129 464.5 368 67.1
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 4.2e-128 462.2 365 65.5
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 5.5e-128 461.8 346 67.1
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 1.2e-127 460.7 360 65.6
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 3.6e-127 459.1 343 67.3
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 4.7e-127 458.8 364 64.6
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 7.9e-127 458.0 361 65.9
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 7.9e-127 458.0 313 75.4
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 7.9e-127 458.0 362 64.9
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.0e-126 457.6 364 64.0
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 1.4e-126 457.2 362 64.9
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.8e-126 456.8 364 65.7
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.8e-126 456.8 370 63.0
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 2.3e-126 456.4 370 65.9
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 3.0e-126 456.1 349 68.2
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 3.0e-126 456.1 346 70.5
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 1.1e-125 454.1 331 69.5
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 2.6e-125 453.0 344 68.9
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 3.3e-125 452.6 345 67.2
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 4.4e-125 452.2 367 64.3
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 4.4e-125 452.2 372 66.1
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 5.7e-125 451.8 358 65.9
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 5.7e-125 451.8 369 64.8
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 7.4e-125 451.4 339 70.2
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 1.8e-123 446.8 345 67.5
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 2.9e-121 439.5 357 65.5
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 4.2e-120 435.6 354 63.0
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 2.1e-119 433.3 367 62.4
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 2.7e-119 433.0 367 61.9
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 2.3e-118 429.9 362 64.4
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 1.5e-117 427.2 363 62.3
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 5.7e-117 425.2 370 63.0
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.2e-116 423.3 360 61.7
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.0e-113 414.5 241 85.9
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.9e-112 410.2 340 63.2
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.7e-111 406.4 213 97.2
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 9.1e-107 391.3 300 67.0
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 4.2e-96 355.9 360 56.9
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 1.2e-95 354.4 368 54.9
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 3.4e-93 346.3 262 68.7
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 9.2e-91 338.2 342 57.0
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 5.9e-90 335.5 382 49.5
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 2.1e-87 327.0 357 51.5
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 3.2e-75 286.6 205 71.7
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 5.4e-75 285.8 211 72.5
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.3e-68 264.6 343 44.9
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 5.6e-64 249.2 342 41.5
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.5e-61 241.1 345 43.2
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 2.0e-61 240.7 344 42.7
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 7.3e-56 222.2 225 53.8
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 2.9e-44 183.7 165 61.2
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 9.6e-40 168.7 152 58.6
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 6.7e-33 146.0 245 37.1
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 1.1e-30 138.7 75 89.3
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 1.5e-21 108.2 102 57.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 5.9e-21 106.3 93 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 2.2e-20 104.4 116 51.7
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 4.2e-19 100.1 350 27.1
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 3.6e-18 97.1 137 46.7
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 1.8e-17 94.7 120 49.2
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.7e-15 88.2 349 26.1
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 6.3e-15 86.3 117 42.7
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 6.3e-07 59.7 35 74.3


User provided reference genes

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