Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 9.3e-167 590.1 293 100.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.6e-164 580.9 293 98.3
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 2.5e-148 528.9 295 91.2
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 7.1e-143 510.8 265 98.1
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.2e-129 466.8 294 80.6
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.0e-128 461.5 261 91.2
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.0e-128 461.5 261 91.6
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 9.1e-122 440.7 296 74.3
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 9.4e-119 430.6 290 75.2
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 9.4e-119 430.6 297 71.4
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.6e-116 422.5 296 70.6
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 7.0e-114 414.5 296 68.6
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.1e-111 407.1 297 69.4
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 3.2e-111 405.6 300 68.7
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 4.2e-111 405.2 282 69.5
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 9.4e-111 404.1 283 69.3
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.7e-110 402.5 293 67.6
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.7e-110 401.7 294 70.7
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 8.0e-110 401.0 299 68.9
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.0e-109 400.6 296 68.2
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 8.8e-109 397.5 277 69.3
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 2.0e-108 396.4 301 67.4
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 4.4e-108 395.2 293 66.6
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 1.3e-107 393.7 295 67.5
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 9.1e-106 387.5 275 68.4
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 2.7e-105 386.0 293 66.6
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 3.8e-104 382.1 297 65.7
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 3.8e-104 382.1 297 65.7
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 5.0e-104 381.7 290 65.9
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 8.5e-104 380.9 297 66.0
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 2.5e-103 379.4 298 65.1
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.5e-103 379.4 292 64.7
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 7.2e-103 377.9 299 64.5
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 9.4e-103 377.5 295 66.4
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 4.7e-102 375.2 297 64.6
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 4.7e-102 375.2 240 72.5
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 6.1e-102 374.8 295 63.4
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 6.1e-102 374.8 293 64.5
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 8.0e-102 374.4 300 65.3
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 8.0e-102 374.4 300 65.7
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 8.0e-102 374.4 300 65.7
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 8.0e-102 374.4 251 79.3
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 1.8e-101 373.2 282 65.2
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 1.8e-101 373.2 303 64.7
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 6.8e-101 371.3 296 64.5
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 9.8e-100 367.5 297 64.0
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 9.8e-100 367.5 246 70.3
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 2.2e-99 366.3 267 66.7
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 2.2e-99 366.3 237 73.4
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 4.8e-99 365.2 284 64.8
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 6.3e-99 364.8 308 61.0
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 8.3e-99 364.4 294 62.9
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.1e-98 364.0 249 71.9
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.4e-98 363.6 294 64.6
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.8e-98 363.2 300 60.7
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 5.4e-98 361.7 299 61.9
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.5e-97 359.0 279 66.3
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 7.7e-97 357.8 248 68.5
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 7.7e-97 357.8 248 68.5
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 1.7e-96 356.7 244 69.7
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.7e-96 356.7 244 69.7
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.7e-96 356.7 244 69.7
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 2.9e-96 355.9 293 64.2
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 3.8e-96 355.5 300 60.3
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 5.0e-96 355.1 300 62.7
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 1.1e-95 354.0 247 70.0
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.5e-95 353.6 240 70.8
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.9e-95 353.2 218 77.5
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 1.9e-95 353.2 305 58.0
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 5.5e-95 351.7 250 65.6
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 2.8e-94 349.4 290 60.7
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.6e-94 349.0 237 70.9
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 3.0e-93 345.9 238 72.7
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 6.8e-93 344.7 248 66.1
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.5e-92 343.6 249 66.7
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.0e-92 343.2 317 56.2
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 3.4e-92 342.4 249 67.5
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 4.4e-92 342.0 249 65.9
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 4.4e-92 342.0 248 66.9
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 6.3e-91 338.2 231 71.9
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.6e-89 333.6 365 51.8
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 2.0e-89 333.2 306 57.5
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 2.7e-89 332.8 241 68.0
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 3.5e-89 332.4 306 57.2
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.0e-88 330.9 239 64.9
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.3e-88 330.5 211 73.5
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 1.3e-88 330.5 241 66.8
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 6.6e-88 328.2 291 61.2
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 4.3e-87 325.5 244 66.0
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 6.1e-86 321.6 241 66.0
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 3.1e-85 319.3 276 62.7
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 5.8e-84 315.1 246 65.9
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 2.1e-78 296.6 243 63.0
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.8e-78 296.2 279 58.8
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 1.3e-75 287.3 308 52.6
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 2.3e-72 276.6 295 50.8
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 9.5e-71 271.2 183 68.9
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.6e-70 270.4 158 84.8
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.8e-70 269.6 187 71.1
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 4.7e-70 268.9 240 56.7
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.9e-66 256.9 289 49.1
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 9.2e-66 254.6 205 65.9
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 1.1e-63 247.7 266 49.6
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.8e-53 213.8 173 63.6
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-40 171.0 101 74.3
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 7.4e-39 165.2 130 60.8
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 1.4e-37 161.0 239 38.9
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 8.4e-35 151.8 107 67.3
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.5e-23 114.4 193 34.2
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 8.5e-11 72.0 56 66.1
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 1.5e-07 61.2 84 44.0


User provided reference genes

Program Settings