Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 6.2e-71 270.8 145 100.0
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.0e-66 255.8 169 82.8
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 6.6e-65 250.8 145 91.7
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 1.7e-60 236.1 145 86.2
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 6.4e-60 234.2 145 86.2
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.1e-59 231.5 145 85.5
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 5.4e-59 231.1 145 83.4
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 9.2e-59 230.3 145 83.4
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 9.2e-59 230.3 145 82.8
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.2e-58 229.9 145 84.8
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 1.6e-58 229.6 145 83.4
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.6e-58 229.6 145 82.8
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 1.6e-58 229.6 144 84.7
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 3.5e-58 228.4 145 82.8
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 4.6e-58 228.0 145 83.4
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 7.8e-58 227.3 145 82.8
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 7.8e-58 227.3 145 82.8
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 7.8e-58 227.3 145 82.8
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.7e-57 226.1 145 84.8
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 3.9e-57 224.9 146 82.2
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 3.9e-57 224.9 145 83.4
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 5.1e-57 224.6 153 81.7
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.1e-57 224.6 145 81.4
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 5.1e-57 224.6 145 81.4
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 1.1e-56 223.4 145 83.4
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.1e-56 223.4 139 82.0
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 1.5e-56 223.0 139 84.2
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.5e-56 223.0 145 80.7
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.5e-56 223.0 145 80.7
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 1.5e-56 223.0 137 85.4
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 1.5e-56 223.0 145 80.7
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.9e-56 222.6 145 83.4
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 1.9e-56 222.6 145 80.7
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 1.9e-56 222.6 125 89.6
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 2.5e-56 222.2 145 82.1
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 3.3e-56 221.9 145 80.7
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 7.3e-56 220.7 145 80.0
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 1.2e-55 219.9 135 83.0
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 1.2e-55 219.9 123 91.9
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 1.2e-55 219.9 145 81.4
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 1.6e-55 219.5 133 84.2
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 1.6e-55 219.5 145 80.0
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 2.1e-55 219.2 145 79.3
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 2.8e-55 218.8 123 91.1
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 2.8e-55 218.8 145 79.3
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 3.6e-55 218.4 134 85.8
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 6.2e-55 217.6 128 87.5
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 6.2e-55 217.6 142 81.0
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 6.2e-55 217.6 145 80.0
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.4e-54 216.5 146 81.5
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 1.4e-54 216.5 140 80.7
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 1.4e-54 216.5 140 80.7
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 1.4e-54 216.5 140 80.7
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 1.8e-54 216.1 145 79.3
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 2.4e-54 215.7 145 79.3
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 4.0e-54 214.9 148 77.0
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 8.9e-54 213.8 143 78.3
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 1.5e-53 213.0 133 81.2
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 1.5e-53 213.0 148 75.7
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 2.0e-53 212.6 136 80.1
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 2.6e-53 212.2 145 77.9
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 3.4e-53 211.8 144 78.5
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 4.4e-53 211.5 145 78.6
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 7.6e-53 210.7 145 78.6
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 7.6e-53 210.7 145 78.6
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 9.9e-53 210.3 145 77.9
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 9.9e-53 210.3 172 70.9
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 2.2e-52 209.1 145 77.2
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 2.2e-52 209.1 145 77.2
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 2.2e-52 209.1 145 77.2
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 2.2e-52 209.1 145 79.3
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 2.2e-52 209.1 133 79.7
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 2.2e-52 209.1 145 75.2
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 2.9e-52 208.8 145 77.2
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 2.9e-52 208.8 145 77.2
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 2.9e-52 208.8 145 77.2
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 3.8e-52 208.4 150 73.3
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 6.4e-52 207.6 145 75.2
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 8.4e-52 207.2 145 77.2
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.1e-51 206.8 135 78.5
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 1.4e-51 206.5 145 73.1
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 1.4e-51 206.5 145 74.5
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 1.4e-51 206.5 146 78.1
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 2.4e-51 205.7 151 74.8
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 3.2e-51 205.3 123 83.7
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 3.2e-51 205.3 145 75.9
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 4.1e-51 204.9 134 79.9
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 4.1e-51 204.9 145 77.2
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 4.1e-51 204.9 145 75.2
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 9.2e-51 203.8 145 75.2
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 1.2e-50 203.4 106 99.1
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 1.6e-50 203.0 145 71.7
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 2.1e-50 202.6 145 76.6
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 2.7e-50 202.2 145 75.9
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 3.5e-50 201.8 127 81.9
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 7.8e-50 200.7 126 82.5
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 1.5e-48 196.4 125 76.8
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 1.9e-48 196.1 125 77.6
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 2.5e-48 195.7 145 75.2
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.1e-46 190.3 125 76.0
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 4.0e-46 188.3 133 77.4
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 4.0e-46 188.3 133 77.4
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 1.5e-45 186.4 128 71.9
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 3.4e-45 185.3 124 71.8
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.3e-44 183.3 118 85.6
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 8.4e-44 180.6 118 82.2
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 5.4e-43 177.9 123 81.3
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 7.1e-43 177.6 118 83.9
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 2.1e-42 176.0 118 81.4
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.7e-41 172.9 118 79.7
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 6.6e-41 171.0 118 78.8
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 2.8e-39 165.6 144 63.9
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 4.8e-39 164.9 135 68.1
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 4.8e-39 164.9 107 84.1
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 6.9e-38 161.0 121 74.4
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.2e-37 160.2 100 79.0
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 9.9e-37 157.1 118 70.3
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 2.9e-36 155.6 118 74.6
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 6.4e-36 154.5 115 66.1
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 9.3e-35 150.6 84 94.0
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.1e-34 149.4 98 77.6
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 2.7e-34 149.1 135 62.2
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 1.0e-33 147.1 84 91.7
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 3.0e-33 145.6 85 88.2
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 3.3e-32 142.1 148 60.8
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.8e-30 136.3 84 84.5
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 3.4e-29 132.1 182 47.8
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 5.8e-29 131.3 86 81.4
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 2.9e-28 129.0 84 83.3
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 1.6e-26 123.2 104 56.7
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 2.7e-26 122.5 129 58.9
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.8e-25 119.8 120 58.3
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 1.5e-24 116.7 88 72.7
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.9e-24 116.3 82 75.6
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 3.3e-24 115.5 61 100.0
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.3e-23 113.6 61 91.8
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.6e-23 113.2 114 51.8
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.1e-22 110.5 64 84.4
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 5.8e-21 104.8 65 78.5
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 1.7e-20 103.2 100 59.0
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 3.5e-18 95.5 121 42.1
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.9e-16 89.7 61 77.0
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 1.9e-16 89.7 60 80.0
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 1.9e-16 89.7 62 74.2
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 2.2e-15 86.3 61 72.1
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 4.8e-15 85.1 107 43.9
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.2e-13 80.5 60 68.3
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 1.0e-12 77.4 41 87.8
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.9e-12 75.9 85 52.9
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 1.0e-09 67.4 136 34.6
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.1e-08 63.9 93 45.2
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 1.3e-07 60.5 49 67.3
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 1.8e-06 56.6 41 68.3


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