Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g04251 Fragaria vesca HOM05D002471 ORTHO05D003712 7.5e-109 397.1 191 100.0
FvH4_2g05730 Fragaria vesca HOM05D002471 ORTHO05D003712 7.7e-37 157.9 85 94.1
FAN20G0068 Fragaria x ananassa HOM05D002471 ORTHO05D003712 7.7e-37 157.9 85 94.1
FAN24G2894 Fragaria x ananassa HOM05D002471 ORTHO05D003712 7.7e-37 157.9 85 94.1
FAN27G3397 Fragaria x ananassa HOM05D002471 ORTHO05D003712 7.7e-37 157.9 85 94.1
MD05G1085000 Malus domestica HOM05D002471 ORTHO05D003712 7.7e-37 157.9 85 94.1
RcHm_v2.0_Chr6g0256621 Rosa chinensis HOM05D002471 ORTHO05D003712 7.7e-37 157.9 85 94.1
FAN15G2265 Fragaria x ananassa HOM05D002471 ORTHO05D003712 1.7e-36 156.8 85 92.9
Manes.10G078500 Manihot esculenta HOM05D002471 ORTHO05D003712 1.7e-36 156.8 85 91.8
QL11p034831 Quercus lobata HOM05D002471 ORTHO05D003712 3.8e-36 155.6 85 91.8
Gohir.D02G208600 Gossypium hirsutum HOM05D002471 ORTHO05D003712 5.0e-36 155.2 85 91.8
Gorai.005G236600 Gossypium raimondii HOM05D002471 ORTHO05D003712 5.0e-36 155.2 85 91.8
Lj9C356G4 Lonicera japonica HOM05D002471 ORTHO05D003712 5.0e-36 155.2 85 91.8
Prupe.8G129300 Prunus persica HOM05D002471 ORTHO05D003712 5.0e-36 155.2 85 92.9
Rhsim11G0163900 Rhododendron simsii HOM05D002471 ORTHO05D003712 5.0e-36 155.2 85 91.8
Cpa.g.sc200.25 Carica papaya HOM05D002471 ORTHO05D003712 6.5e-36 154.8 85 90.6
COL.COLO4_32627 Corchorus olitorius HOM05D002471 ORTHO05D003712 6.5e-36 154.8 85 90.6
Gohir.A03G187850 Gossypium hirsutum HOM05D002471 ORTHO05D003712 6.5e-36 154.8 85 90.6
Gohir.A13G042500 Gossypium hirsutum HOM05D002471 ORTHO05D003712 6.5e-36 154.8 85 90.6
CiPaw.05G008400 Carya illinoinensis HOM05D002471 ORTHO05D003712 8.5e-36 154.5 85 91.8
Duzib132G0131 Durio zibethinus HOM05D002471 ORTHO05D003712 8.5e-36 154.5 85 89.4
Gohir.D13G040900 Gossypium hirsutum HOM05D002471 ORTHO05D003712 8.5e-36 154.5 85 89.4
Thecc.02G103800 Theobroma cacao HOM05D002471 ORTHO05D003712 8.5e-36 154.5 85 89.4
Lalb_Chr05g0219311 Lupinus albus HOM05D002471 ORTHO05D003712 1.1e-35 154.1 85 91.8
Manes.07G072800 Manihot esculenta HOM05D002471 ORTHO05D003712 1.1e-35 154.1 85 89.4
SalBow6G6213 Salvia bowleyana HOM05D002471 ORTHO05D003712 1.1e-35 154.1 85 90.6
SGA_v2.0_scaffold90G27611 Striga asiatica HOM05D002471 ORTHO05D003712 1.1e-35 154.1 85 90.6
Atru.chr5.2641 Acer truncatum HOM05D002471 ORTHO05D003712 1.4e-35 153.7 85 89.4
Atru.chr5.2647 Acer truncatum HOM05D002471 ORTHO05D003712 1.4e-35 153.7 85 89.4
Duzib052G0365 Durio zibethinus HOM05D002471 ORTHO05D003712 1.4e-35 153.7 85 89.4
Potri.001G304100 Populus trichocarpa HOM05D002471 ORTHO05D003712 1.4e-35 153.7 85 91.8
THA.LOC104807837 Tarenaya hassleriana HOM05D002471 ORTHO05D003712 1.4e-35 153.7 85 90.6
MSTRG.16728 Avicennia marina HOM05D002471 ORTHO05D003712 1.9e-35 153.3 85 90.6
Migut.B00367 Erythranthe guttata HOM05D002471 ORTHO05D003712 1.9e-35 153.3 85 89.4
MD00G1138200 Malus domestica HOM05D002471 ORTHO05D003712 1.9e-35 153.3 85 91.8
Nitab4.5_0001220g0010 Nicotiana tabacum HOM05D002471 ORTHO05D003712 1.9e-35 153.3 85 89.4
Nitab4.5_0002740g0030 Nicotiana tabacum HOM05D002471 ORTHO05D003712 1.9e-35 153.3 85 89.4
Potri.009G099400 Populus trichocarpa HOM05D002471 ORTHO05D003712 1.9e-35 153.3 85 90.6
GSVIVG01031710001 Vitis vinifera HOM05D002471 ORTHO05D003712 1.9e-35 153.3 85 90.6
Actinidia17877 Actinidia chinensis HOM05D002471 ORTHO05D003712 2.5e-35 152.9 85 88.2
CANSAT25G1275 Cannabis sativa HOM05D002471 ORTHO05D003712 2.5e-35 152.9 85 90.6
Cfa004547 Carpinus fangiana HOM05D002471 ORTHO05D003712 2.5e-35 152.9 85 90.6
Haze_10112 Corylus avellana HOM05D002471 ORTHO05D003712 2.5e-35 152.9 107 76.6
Haze_10115 Corylus avellana HOM05D002471 ORTHO05D003712 2.5e-35 152.9 85 90.6
Gorai.013G045900 Gossypium raimondii HOM05D002471 ORTHO05D003712 2.5e-35 152.9 85 88.2
TAR628G0580 Trochodendron aralioides HOM05D002471 ORTHO05D003712 2.5e-35 152.9 85 89.4
Dinv15736 Davidia involucrata HOM05D002471 ORTHO05D003712 3.2e-35 152.5 85 88.2
Eucgr.I01130 Eucalyptus grandis HOM05D002471 ORTHO05D003712 3.2e-35 152.5 85 90.6
Lalb_Chr16g0384861 Lupinus albus HOM05D002471 ORTHO05D003712 3.2e-35 152.5 85 90.6
Cc02_g19010 Coffea canephora HOM05D002471 ORTHO05D003712 4.2e-35 152.1 85 88.2
Solyc01g107880.3 Solanum lycopersicum HOM05D002471 ORTHO05D003712 4.2e-35 152.1 85 89.4
Sopen01g050050 Solanum pennellii HOM05D002471 ORTHO05D003712 4.2e-35 152.1 85 89.4
PGSC0003DMG400025880 Solanum tuberosum HOM05D002471 ORTHO05D003712 4.2e-35 152.1 85 89.4
AL7G17300 Arabidopsis lyrata HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
arahy.Tifrunner.gnm1.ann1.92SQ9J Arachis hypogaea HOM05D002471 ORTHO05D003712 5.5e-35 151.8 107 76.6
arahy.Tifrunner.gnm1.ann1.IV52NX Arachis hypogaea HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 90.6
BcaNung03790 Brassica carinata HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
BcaNung03791 Brassica carinata HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
A01p04350 Brassica napus HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
C01p04750 Brassica napus HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
BolC1t00459H Brassica oleracea HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
BraA01t00424Z Brassica rapa HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
Carub.0007s0632 Capsella rubella HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
CARHR242210 Cardamine hirsuta HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
Ca_18711_v3 Cicer arietinum L. HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 90.6
Dinv42172 Davidia involucrata HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 88.2
Glyma.02G103800 Glycine max HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 90.6
Lj4g0010035 Lotus japonicus HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 90.6
Medtr4g085550 Medicago truncatula HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
Oeu010384.1 Olea europaea HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
Phvul.003G047600 Phaseolus vulgaris HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 90.6
PGR142G0507 Punica granatum HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 88.2
Sp7g31810 Schrenkiella parvula HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 89.4
TPR.G12707 Trifolium pratense HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 90.6
VMungo0251G3159 Vigna mungo HOM05D002471 ORTHO05D003712 5.5e-35 151.8 85 90.6
CSS0003761 Camellia sinensis var. sinensis HOM05D002471 ORTHO05D003712 7.2e-35 151.4 85 89.4
Glyma.07G215200 Glycine max HOM05D002471 ORTHO05D003712 7.2e-35 151.4 85 89.4
Peaxi162Scf00016g00211 Petunia axillaris HOM05D002471 ORTHO05D003712 7.2e-35 151.4 85 89.4
Psat7g126400 Pisum sativum HOM05D002471 ORTHO05D003712 7.2e-35 151.4 85 89.4
CiPaw.06G171300 Carya illinoinensis HOM05D002471 ORTHO05D003712 9.4e-35 151.0 85 89.4
vmacro02027 Vaccinium macrocarpon HOM05D002471 ORTHO05D003712 9.4e-35 151.0 85 89.4
AT4G34100 Arabidopsis thaliana HOM05D002471 ORTHO05D003712 1.2e-34 150.6 85 88.2
Ciclev10027715m.g Citrus clementina HOM05D002471 ORTHO05D003712 1.2e-34 150.6 85 89.4
PSO170G0111 Papaver somniferum HOM05D002471 ORTHO05D003712 1.2e-34 150.6 85 88.2
Sabra16G0190800 Salix brachista HOM05D002471 ORTHO05D003712 1.6e-34 150.2 85 89.4
ClCG02G006070 Citrullus lanatus HOM05D002471 ORTHO05D003712 2.1e-34 149.8 85 87.1
MELO3C018461.2 Cucumis melo HOM05D002471 ORTHO05D003712 2.1e-34 149.8 85 87.1
CsaV3_7G008470 Cucumis sativus L. HOM05D002471 ORTHO05D003712 2.1e-34 149.8 85 87.1
TWI79G1465 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 2.1e-34 149.8 85 87.1
Lsat_1_v5_gn_0_4161 Lactuca sativa HOM05D002471 ORTHO05D003712 3.6e-34 149.1 85 84.7
Oeu048698.2 Olea europaea HOM05D002471 ORTHO05D003712 3.6e-34 149.1 105 74.3
Duzib248G1549 Durio zibethinus HOM05D002471 ORTHO05D003712 7.9e-34 147.9 85 88.2
PSO210G1934 Papaver somniferum HOM05D002471 ORTHO05D003712 7.9e-34 147.9 85 87.1
Sed0022765 Sechium edule HOM05D002471 ORTHO05D003712 7.9e-34 147.9 85 85.9
Thhalv10024280m.g Eutrema salsugineum HOM05D002471 ORTHO05D003712 1.0e-33 147.5 85 88.2
Sabra09G0075700 Salix brachista HOM05D002471 ORTHO05D003712 1.0e-33 147.5 85 88.2
TWI75G1110 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 1.4e-33 147.1 85 85.9
Sed0014443 Sechium edule HOM05D002471 ORTHO05D003712 1.8e-33 146.7 85 83.5
TWI31G1427 Tripterygium wilfordii HOM05D002471 ORTHO05D003712 1.8e-33 146.7 85 85.9
HPP92_000199 Vanilla planifolia HOM05D002471 ORTHO05D003712 1.8e-33 146.7 85 84.7
MSTRG.20171 Avicennia marina HOM05D002471 ORTHO05D003712 2.3e-33 146.4 85 85.9
Nitab4.5_0000292g0080 Nicotiana tabacum HOM05D002471 ORTHO05D003712 2.3e-33 146.4 107 72.9
Aqoxy6G01258 Aquilegia oxysepala HOM05D002471 ORTHO05D003712 3.0e-33 146.0 105 73.3
Nn5g30358 Nelumbo nucifera HOM05D002471 ORTHO05D003712 3.0e-33 146.0 85 84.7
ATR0762G060 Amborella trichopoda HOM05D002471 ORTHO05D003712 6.7e-33 144.8 85 85.9
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 8.8e-33 144.4 111 70.3
Nn1g04785 Nelumbo nucifera HOM05D002471 ORTHO05D003712 8.8e-33 144.4 85 84.7
CSS0003725 Camellia sinensis var. sinensis HOM05D002471 ORTHO05D003712 1.1e-32 144.1 85 83.5
Actinidia12932 Actinidia chinensis HOM05D002471 ORTHO05D003712 1.5e-32 143.7 85 87.1
Oeu028240.1 Olea europaea HOM05D002471 ORTHO05D003712 1.5e-32 143.7 85 82.4
HanXRQChr09g0250641 Helianthus annuus HOM05D002471 ORTHO05D003712 2.0e-32 143.3 85 84.7
vmacro19516 Vaccinium macrocarpon HOM05D002471 ORTHO05D003712 2.0e-32 143.3 85 81.2
DCAR_022010 Daucus carota HOM05D002471 ORTHO05D003712 2.6e-32 142.9 110 68.2
Aqoxy5G01185 Aquilegia oxysepala HOM05D002471 ORTHO05D003712 3.3e-32 142.5 85 83.5
Nitab4.5_0001230g0030 Nicotiana tabacum HOM05D002471 ORTHO05D003712 5.7e-32 141.7 85 83.5
HanXRQChr03g0070141 Helianthus annuus HOM05D002471 ORTHO05D003712 1.3e-31 140.6 85 83.5
Lsat_1_v5_gn_5_115740 Lactuca sativa HOM05D002471 ORTHO05D003712 1.3e-31 140.6 87 77.0
CDE04G3492 Ceratophyllum demersum HOM05D002471 ORTHO05D003712 2.8e-31 139.4 85 78.8
ECA234G3000 Erigeron canadensis HOM05D002471 ORTHO05D003712 2.8e-31 139.4 87 79.3
EL10Ac9g22322 Beta vulgaris HOM05D002471 ORTHO05D003712 3.7e-31 139.0 85 81.2
AUR62010254 Chenopodium quinoa HOM05D002471 ORTHO05D003712 3.7e-31 139.0 85 81.2
AUR62013236 Chenopodium quinoa HOM05D002471 ORTHO05D003712 3.7e-31 139.0 85 81.2
Hund00120 Selenicereus undatus HOM05D002471 ORTHO05D003712 3.7e-31 139.0 85 81.2
HanXRQChr16g0515001 Helianthus annuus HOM05D002471 ORTHO05D003712 4.8e-31 138.7 87 79.3
unitig_0.g96 Utricularia gibba HOM05D002471 ORTHO05D003712 4.8e-31 138.7 85 81.2
PSO675G4888 Papaver somniferum HOM05D002471 ORTHO05D003712 6.3e-31 138.3 85 80.0
CDE02G1550 Ceratophyllum demersum HOM05D002471 ORTHO05D003712 1.1e-30 137.5 85 78.8
PSO541G5863 Papaver somniferum HOM05D002471 ORTHO05D003712 1.4e-30 137.1 85 78.8
Ah.01g017910 Amaranthus hybridus HOM05D002471 ORTHO05D003712 1.8e-30 136.7 85 78.8
CAN.G1231.31 Capsicum annuum HOM05D002471 ORTHO05D003712 3.1e-30 136.0 77 89.6
ECA236G4146 Erigeron canadensis HOM05D002471 ORTHO05D003712 4.1e-30 135.6 85 78.8
Ah.01g010650 Amaranthus hybridus HOM05D002471 ORTHO05D003712 6.9e-30 134.8 85 78.8
Hund06339 Selenicereus undatus HOM05D002471 ORTHO05D003712 6.9e-30 134.8 85 76.5
Rhsim05G0086900 Rhododendron simsii HOM05D002471 ORTHO05D003712 1.2e-29 134.0 85 75.3
Sc14g0001820 Simmondsia chinensis HOM05D002471 ORTHO05D003712 1.2e-29 134.0 85 77.6
DCAR_029075 Daucus carota HOM05D002471 ORTHO05D003712 2.6e-29 132.9 105 64.8
Os06g0639100 Oryza sativa ssp. japonica HOM05D002471 ORTHO05D003712 1.3e-28 130.6 85 74.1
HanXRQChr16g0509961 Helianthus annuus HOM05D002471 ORTHO05D003712 1.4e-27 127.1 106 61.3
Zm00001eb387290 Zea mays HOM05D002471 ORTHO05D003712 1.4e-27 127.1 85 71.8
Sc14g0001810 Simmondsia chinensis HOM05D002471 ORTHO05D003712 1.9e-27 126.7 85 72.9
Zm00001eb275450 Zea mays HOM05D002471 ORTHO05D003712 2.5e-27 126.3 85 71.8
AL7G17290 Arabidopsis lyrata HOM05D002471 ORTHO05D003712 3.2e-27 125.9 84 72.6
SHI05318 Sapria himalayana HOM05D002471 ORTHO05D003712 3.2e-27 125.9 85 71.8
BcaC01g00935 Brassica carinata HOM05D002471 ORTHO05D003712 2.3e-25 119.8 109 60.6
C03p86130 Brassica napus HOM05D002471 ORTHO05D003712 2.3e-25 119.8 109 60.6
BolC3t20901H Brassica oleracea HOM05D002471 ORTHO05D003712 2.3e-25 119.8 109 60.6
SEGI_08024 Sequoiadendron giganteum HOM05D002471 ORTHO05D003712 2.6e-24 116.3 85 67.1
BcaB03g11857 Brassica carinata HOM05D002471 ORTHO05D003712 2.8e-23 112.8 112 59.8
Mapoly0082s0015 Marchantia polymorpha HOM05D002471 ORTHO05D003712 4.1e-22 109.0 85 63.5
AagrBONN_evm.TU.Sc2ySwM_228.2821 Anthoceros agrestis HOM05D002471 ORTHO05D003712 7.0e-22 108.2 85 65.9
SEGI_06740 Sequoiadendron giganteum HOM05D002471 ORTHO05D003712 7.0e-22 108.2 93 63.4
ECA236G4164 Erigeron canadensis HOM05D002471 ORTHO05D003712 3.5e-21 105.9 103 55.3
Thhalv10022448m.g Eutrema salsugineum HOM05D002471 ORTHO05D003712 2.2e-20 103.2 72 79.2
BraA03t15330Z Brassica rapa HOM05D002471 ORTHO05D003712 3.8e-20 102.4 84 63.1
BcaC01g00933 Brassica carinata HOM05D002471 ORTHO05D003712 7.2e-19 98.2 87 60.9
C03p86110 Brassica napus HOM05D002471 ORTHO05D003712 7.2e-19 98.2 87 60.9
BolC3t20899H Brassica oleracea HOM05D002471 ORTHO05D003712 7.2e-19 98.2 87 60.9
Pp3c15_8020 Physcomitrium patens HOM05D002471 ORTHO05D003712 1.2e-18 97.4 101 50.5
Pp3c15_7960 Physcomitrium patens HOM05D002471 ORTHO05D003712 1.6e-18 97.1 101 50.5
A08p17150 Brassica napus HOM05D002471 ORTHO05D003712 3.6e-18 95.9 85 62.4
Pp3c9_10370 Physcomitrium patens HOM05D002471 ORTHO05D003712 6.7e-17 91.7 101 49.5
Pp3c9_10380 Physcomitrium patens HOM05D002471 ORTHO05D003712 6.7e-17 91.7 101 49.5
Dinv30011 Davidia involucrata HOM05D002471 ORTHO05D003712 1.2e-16 90.9 115 49.6
BraA08t33676Z Brassica rapa HOM05D002471 ORTHO05D003712 5.7e-16 88.6 74 63.5
SMO347G0169 Selaginella moellendorffii HOM05D002471 ORTHO05D003712 7.5e-16 88.2 86 55.8
GSVIVG01022083001 Vitis vinifera HOM05D002471 ORTHO05D003712 4.8e-15 85.5 100 46.0
CANSAT01G1155 Cannabis sativa HOM05D002471 ORTHO05D003712 1.1e-14 84.3 85 49.4
HanXRQChr15g0484081 Helianthus annuus HOM05D002471 ORTHO05D048245 2.2e-12 76.6 94 43.6
CBR_g17730 Chara braunii HOM05D002471 ORTHO05D003712 1.9e-11 73.6 87 43.7
PSO541G4500 Papaver somniferum HOM05D002471 ORTHO05D003712 4.2e-11 72.4 85 47.1
PSO675G5620 Papaver somniferum HOM05D002471 ORTHO05D003712 4.2e-11 72.4 85 45.9
PSO675G7634 Papaver somniferum HOM05D002471 ORTHO05D003712 4.7e-10 68.9 77 45.5
Pp3c1_24550 Physcomitrium patens HOM05D002471 ORTHO05D003712 8.0e-10 68.2 83 39.8
PSO407G0215 Papaver somniferum HOM05D002471 ORTHO05D003712 2.0e-08 63.5 86 38.4
PSO675G8350 Papaver somniferum HOM05D002471 ORTHO05D003712 1.1e-06 57.8 88 42.0
CAN.G1231.34 Capsicum annuum HOM05D002471 ORTHO05D003712 2.4e-06 56.6 42 73.8
Lj9A355T76 Lonicera japonica HOM05D002471 ORTHO05D003712 9.1e-06 54.7 79 41.8
PSO541G4831 Papaver somniferum HOM05D002471 ORTHO05D003712 9.1e-06 54.7 87 35.6


User provided reference genes

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