Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 1.7e-252 875.5 446 100.0
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 6.6e-249 863.6 446 98.7
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 8.6e-249 863.2 446 99.1
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.1e-248 862.8 446 98.7
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 3.1e-238 828.2 444 94.8
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 5.7e-208 727.6 447 83.0
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 6.9e-198 694.1 455 78.7
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.6e-194 682.9 419 80.9
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 4.4e-192 674.9 425 77.9
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 9.7e-192 673.7 415 79.5
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 5.3e-190 667.9 419 77.6
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 5.3e-190 667.9 418 79.4
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.2e-189 666.8 419 78.5
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.0e-189 666.0 412 79.6
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 2.0e-189 666.0 418 78.9
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 5.9e-189 664.5 412 79.9
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 1.7e-188 662.9 417 77.9
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.7e-188 662.9 416 78.6
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 2.9e-188 662.1 408 78.4
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 8.5e-188 660.6 433 76.4
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 7.2e-187 657.5 419 78.8
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 1.0e-185 653.7 417 76.3
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 1.0e-185 653.7 417 77.2
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 2.3e-185 652.5 453 73.3
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 3.3e-184 648.7 417 76.0
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 4.4e-184 648.3 407 77.6
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 5.7e-184 647.9 411 77.1
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 7.4e-184 647.5 443 74.0
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 1.3e-183 646.7 455 73.0
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.7e-183 646.4 418 75.8
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 2.2e-180 636.0 407 78.9
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 2.2e-180 636.0 405 78.0
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.9e-180 635.6 418 74.6
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 3.8e-180 635.2 415 74.9
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 5.0e-180 634.8 411 75.2
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 6.5e-180 634.4 421 75.1
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 8.5e-180 634.0 421 74.1
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 3.2e-179 632.1 405 76.3
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.7e-175 619.8 420 75.5
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.7e-175 619.8 420 75.5
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.8e-175 619.0 440 71.1
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 2.7e-173 612.5 412 75.5
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 4.5e-173 611.7 412 72.8
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.3e-172 610.1 416 72.4
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 2.9e-172 609.0 400 74.5
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 5.0e-172 608.2 410 73.9
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 6.5e-172 607.8 414 72.7
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 2.5e-171 605.9 415 70.4
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 1.2e-165 587.0 413 70.5
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.7e-165 585.9 289 97.6
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 5.9e-165 584.7 408 71.3
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.6e-162 576.6 417 68.8
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 2.1e-162 576.2 402 69.2
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 3.6e-162 575.5 410 69.0
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 4.0e-161 572.0 445 66.7
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 3.4e-160 568.9 419 66.8
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 6.3e-159 564.7 407 68.6
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 3.1e-158 562.4 415 65.8
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 4.1e-158 562.0 411 67.4
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 9.2e-158 560.8 415 67.2
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 1.6e-157 560.1 419 66.6
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 4.5e-157 558.5 408 67.6
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 1.7e-156 556.6 377 73.2
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 3.8e-156 555.4 419 66.8
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 8.6e-156 554.3 408 67.4
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.6e-154 550.1 416 65.4
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 1.6e-154 550.1 402 67.7
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 2.1e-154 549.7 417 64.7
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 3.6e-154 548.9 417 65.2
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 3.6e-154 548.9 402 68.2
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 4.7e-154 548.5 417 64.3
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.4e-153 547.0 417 63.8
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 3.1e-153 545.8 417 63.8
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 2.0e-152 543.1 417 63.3
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.6e-152 542.7 409 66.5
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 4.4e-152 542.0 414 64.3
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 1.7e-151 540.0 407 65.8
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.7e-151 540.0 421 63.9
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 5.4e-150 535.0 415 62.9
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 1.2e-149 533.9 414 63.0
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 3.9e-148 528.9 389 64.8
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 5.0e-148 528.5 455 58.9
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 1.6e-146 523.5 404 65.1
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 8.0e-146 521.2 391 64.2
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 4.0e-145 518.8 429 61.3
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 3.4e-144 515.8 404 63.9
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.7e-143 513.5 319 77.4
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 6.4e-143 511.5 329 75.7
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.2e-141 507.3 453 57.4
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.2e-141 507.3 425 61.2
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 4.7e-138 495.4 482 54.1
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 6.8e-137 491.5 387 64.3
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 9.9e-136 487.6 347 68.0
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.2e-135 486.5 366 63.9
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 9.2e-134 481.1 347 67.4
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 2.5e-131 473.0 331 68.6
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 4.3e-131 472.2 319 72.1
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 4.4e-128 462.2 403 54.8
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.1e-123 447.6 419 54.4
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.1e-118 431.0 309 67.6
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.2e-110 402.9 337 58.5
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 9.3e-110 401.4 451 53.0
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 7.9e-109 398.3 345 57.1
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 4.8e-106 389.0 282 68.8
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 6.9e-105 385.2 280 68.9
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 7.4e-99 365.2 298 66.1
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 5.3e-97 359.0 410 45.9
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.5e-96 357.5 335 59.4
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.0e-95 354.8 294 56.1
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.4e-94 350.9 316 53.8
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 4.1e-89 332.8 299 55.9
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 4.5e-88 329.3 358 48.6
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 3.8e-87 326.2 326 53.4
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 2.1e-85 320.5 241 63.9
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 3.9e-84 316.2 218 72.5
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 6.1e-77 292.4 180 77.8
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 5.0e-71 272.7 261 51.3
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 6.5e-71 272.3 321 45.5
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.0e-68 265.0 160 77.5
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.3e-55 221.5 233 48.1
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.8e-52 211.1 162 62.3
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 4.2e-46 189.9 144 64.6
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 4.0e-44 183.3 124 72.6
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 8.9e-44 182.2 131 70.2
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-41 175.3 192 53.6
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 1.2e-40 171.8 118 76.3
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.5e-38 164.1 272 35.3
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 1.1e-20 105.5 196 35.2
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.6e-19 99.4 59 79.7
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 6.6e-15 86.3 78 60.3


User provided reference genes

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