Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 0.0e+00 2561.2 1325 100.0
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 2529.6 1361 96.9
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 2480.7 1325 97.5
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 2464.9 1361 94.7
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 2458.7 1363 94.3
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 0.0e+00 2200.6 1328 87.5
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 0.0e+00 1653.6 1352 66.8
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 0.0e+00 1482.6 1372 60.1
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 0.0e+00 1439.5 1372 58.6
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 0.0e+00 1438.3 1505 54.8
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 0.0e+00 1406.3 1361 58.1
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 0.0e+00 1398.6 1363 57.5
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 0.0e+00 1389.4 1372 57.0
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1388.6 1360 57.4
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1387.1 1361 56.6
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1382.5 1383 55.7
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 0.0e+00 1380.5 1360 57.4
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 0.0e+00 1377.5 1362 56.3
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1375.5 1357 56.8
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 0.0e+00 1357.8 1451 54.7
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 0.0e+00 1338.9 1354 56.2
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 0.0e+00 1332.0 1369 54.7
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 0.0e+00 1331.2 1359 55.3
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 0.0e+00 1318.5 1359 54.7
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 0.0e+00 1303.5 1363 54.4
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 0.0e+00 1286.9 1351 53.5
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 0.0e+00 1284.6 1358 54.2
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 0.0e+00 1283.1 1358 54.1
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 0.0e+00 1282.7 1355 54.1
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 0.0e+00 1278.5 1349 53.3
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 0.0e+00 1273.1 1349 53.8
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 0.0e+00 1265.4 1354 52.9
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 0.0e+00 1258.8 1364 52.3
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 0.0e+00 1254.6 1417 52.1
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 0.0e+00 1253.0 1353 53.1
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 0.0e+00 1250.0 1351 52.2
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 0.0e+00 1244.2 1399 51.8
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1241.9 1359 53.4
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 0.0e+00 1241.5 1349 53.0
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 0.0e+00 1240.7 1401 51.3
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 0.0e+00 1234.2 1468 50.7
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 0.0e+00 1222.2 1345 51.9
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 0.0e+00 1217.2 1374 51.2
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 0.0e+00 1204.1 1386 50.7
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1203.3 1362 51.5
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 0.0e+00 1203.0 1356 51.5
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 0.0e+00 1195.6 1355 51.5
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 0.0e+00 1193.7 1391 50.0
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 0.0e+00 1193.3 1373 51.9
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 0.0e+00 1192.2 1356 51.0
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 0.0e+00 1188.7 1371 50.7
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 0.0e+00 1181.4 1349 50.9
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 0.0e+00 1169.1 1370 50.4
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 0.0e+00 1158.3 1378 50.4
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 0.0e+00 1158.3 1356 50.0
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 0.0e+00 1155.2 1350 49.5
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 0.0e+00 1154.0 1405 49.1
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 0.0e+00 1147.1 1373 49.4
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 0.0e+00 1144.8 1366 49.4
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 0.0e+00 1139.4 1432 47.1
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 0.0e+00 1135.2 1373 48.7
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 0.0e+00 1132.5 1388 48.8
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 0.0e+00 1129.4 1358 48.5
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 0.0e+00 1127.9 1347 48.8
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 0.0e+00 1126.7 1367 48.6
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 0.0e+00 1126.3 1358 48.3
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 0.0e+00 1120.9 1351 48.3
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 0.0e+00 1119.0 1358 49.6
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 0.0e+00 1118.6 1350 48.4
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 0.0e+00 1118.2 1379 48.5
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 0.0e+00 1115.9 1349 48.6
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 0.0e+00 1115.9 1360 47.9
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 0.0e+00 1115.5 1366 49.2
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 0.0e+00 1115.1 1360 47.9
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 0.0e+00 1113.2 1351 48.0
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 0.0e+00 1112.4 1360 47.9
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 0.0e+00 1112.4 1360 47.9
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 0.0e+00 1112.4 1360 47.9
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 0.0e+00 1109.4 1348 48.7
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 0.0e+00 1106.7 1362 48.6
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 0.0e+00 1102.8 1404 47.9
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 0.0e+00 1090.5 1408 47.4
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 0.0e+00 1082.4 1427 46.0
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 4.5e-311 1071.6 1357 47.2
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 7.1e-307 1057.7 1358 47.1
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 9.3e-307 1057.4 1305 48.4
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 2.1e-298 1029.6 1060 55.0
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 2.0e-293 1013.1 1372 45.8
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 4.6e-290 1001.9 1351 46.1
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 1.3e-289 1000.3 1270 47.6
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 9.7e-272 941.0 1359 43.8
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 1.5e-269 933.7 1346 42.9
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 3.0e-265 919.5 1098 48.7
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 2.4e-262 909.8 923 57.0
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 8.5e-260 901.4 913 59.0
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 2.0e-253 880.2 1314 42.7
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 6.1e-226 788.9 819 56.3
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 3.4e-216 756.5 904 49.1
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 9.0e-193 678.7 856 48.2
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 4.2e-190 669.8 714 55.3
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 1.5e-184 651.4 703 52.3
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 4.9e-183 646.4 713 53.2
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 1.8e-180 637.9 638 55.3
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 2.8e-178 630.6 744 49.5
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 5.3e-169 599.7 827 43.8
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 2.2e-159 567.8 1287 33.3
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.1e-155 555.4 479 59.9
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 4.8e-154 550.1 1357 33.0
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 1.4e-153 548.5 596 50.8
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 1.0e-135 489.2 1350 29.2
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.0e-135 489.2 524 49.4
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 3.2e-134 484.2 359 67.7
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 3.4e-131 474.2 513 52.8
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 1.8e-129 468.4 1134 32.4
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 3.5e-128 464.2 1137 30.7
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 3.3e-118 431.0 359 58.5
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 7.8e-112 409.8 497 47.9
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 3.1e-108 397.9 417 48.9
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 7.8e-96 356.7 352 58.5
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 4.1e-89 334.3 347 49.3
SEGI_08752 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 9.2e-89 333.2 673 34.6
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.1e-77 295.4 326 46.3
Os02g0784100 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 4.4e-75 287.7 237 61.6
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 1.2e-67 263.1 316 49.4
Thecc.01G125300 Theobroma cacao HOM05D005030 ORTHO05D006490 9.3e-65 253.4 369 47.7
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 6.7e-55 220.7 242 54.5
vmacro12844 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 3.8e-50 204.9 326 40.8
MD17G1248600 Malus domestica HOM05D005030 ORTHO05D006490 2.5e-49 202.2 301 44.5
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 4.1e-44 184.9 268 43.7
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 4.2e-41 174.9 246 40.2
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.3e-39 169.1 116 71.6
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 2.4e-36 159.1 363 30.6
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 5.0e-34 151.4 502 26.9
vmacro12843 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 5.5e-33 147.9 198 44.9
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 1.9e-25 122.9 169 46.7
CBR_g36665 Chara braunii HOM05D005030 ORTHO05D006490 2.8e-21 109.0 458 23.4
BcaNung06136 Brassica carinata HOM05D005030 ORTHO05D006490 4.8e-21 108.2 213 37.6
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 4.5e-19 101.7 94 54.3
Sc05g0004550 Simmondsia chinensis HOM05D005030 ORTHO05D006490 1.7e-13 83.2 86 53.5
TAR376G0117 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.7e-13 83.2 140 37.9
MBI11_g38367_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 2.0e-11 76.3 70 57.1
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.0e-11 76.3 107 43.0
Actinidia09824 Actinidia chinensis HOM05D005030 ORTHO05D001675 1.0e-07 63.9 61 54.1
SEGI_13008 Sequoiadendron giganteum HOM05D005030 ORTHO05D050943 1.5e-06 60.1 411 23.1


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