Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2584 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.8e-75 285.8 144 100.0
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.2e-73 278.9 142 97.9
FAN27G1057 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.2e-73 278.9 142 97.9
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.1e-72 276.6 142 97.2
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 2.1e-71 272.3 142 95.8
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.1e-71 272.3 142 95.8
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 4.7e-71 271.2 142 93.7
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 5.5e-64 247.7 136 87.5
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 3.6e-63 245.0 135 87.4
MD10G1119600 Malus domestica HOM05D004110 ORTHO05D004810 2.3e-62 242.3 135 87.4
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 1.8e-59 232.6 139 79.9
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 2.1e-55 219.2 138 73.9
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 6.1e-55 217.6 139 74.8
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 8.0e-55 217.2 139 77.0
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 1.0e-54 216.9 138 76.8
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 8.9e-54 213.8 135 77.8
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.5e-53 213.0 135 75.6
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 5.8e-53 211.1 136 77.2
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 7.5e-53 210.7 136 76.5
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 9.8e-53 210.3 136 74.3
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 1.3e-52 209.9 137 76.6
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 1.3e-52 209.9 133 75.2
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 1.7e-52 209.5 130 74.6
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 3.7e-52 208.4 135 73.3
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 4.9e-52 208.0 136 76.5
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 3.2e-51 205.3 135 71.9
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 7.0e-51 204.1 136 75.0
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 9.2e-51 203.8 136 71.3
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 3.0e-49 198.7 138 70.3
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 8.6e-49 197.2 137 71.5
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 1.1e-48 196.8 138 70.3
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 5.6e-48 194.5 139 66.9
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 7.3e-48 194.1 134 70.1
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 1.6e-47 193.0 138 69.6
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 3.6e-47 191.8 139 66.2
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 3.1e-46 188.7 138 65.2
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 8.9e-46 187.2 137 65.0
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 8.9e-46 187.2 136 68.4
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 2.0e-45 186.0 137 66.4
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 2.6e-45 185.7 135 66.7
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 4.4e-45 184.9 139 64.7
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 4.4e-45 184.9 139 64.7
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 5.8e-45 184.5 129 68.2
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 2.2e-44 182.6 132 67.4
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 2.2e-44 182.6 132 67.4
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 3.7e-44 181.8 134 66.4
CARHR294450 Cardamine hirsuta HOM05D004110 ORTHO05D004810 3.7e-44 181.8 129 68.2
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 6.4e-44 181.0 137 65.7
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 8.3e-44 180.6 134 65.7
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 8.3e-44 180.6 132 66.7
Glyma.11G098600 Glycine max HOM05D004110 ORTHO05D004810 8.3e-44 180.6 137 64.2
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 1.1e-43 180.3 132 66.7
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 1.1e-43 180.3 132 66.7
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 1.1e-43 180.3 128 68.0
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 1.4e-43 179.9 137 65.0
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 3.2e-43 178.7 131 63.4
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 7.0e-43 177.6 135 64.4
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 7.0e-43 177.6 125 68.8
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 1.6e-42 176.4 129 65.9
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 2.1e-42 176.0 132 65.9
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 2.7e-42 175.6 140 63.6
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 6.0e-42 174.5 136 66.2
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 1.0e-41 173.7 129 65.1
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 1.0e-41 173.7 136 65.4
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 1.7e-41 172.9 125 67.2
AUR62010090 Chenopodium quinoa HOM05D004110 ORTHO05D004810 3.9e-41 171.8 131 62.6
Nitab4.5_0006590g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 4.3e-40 168.3 138 61.6
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 4.3e-40 168.3 129 64.3
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 5.6e-40 167.9 144 59.0
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 5.6e-40 167.9 138 58.7
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 5.6e-40 167.9 138 61.6
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 2.1e-39 166.0 138 59.4
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 2.8e-39 165.6 130 62.3
ClCG02G011600 Citrullus lanatus HOM05D004110 ORTHO05D004810 2.8e-39 165.6 134 62.7
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 2.8e-39 165.6 124 66.9
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 6.2e-39 164.5 124 65.3
MELO3C020789.2 Cucumis melo HOM05D004110 ORTHO05D004810 2.3e-38 162.5 124 66.1
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 2.3e-38 162.5 130 58.5
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 5.2e-38 161.4 131 61.8
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 6.8e-38 161.0 140 57.1
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 6.8e-38 161.0 138 58.0
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 8.9e-38 160.6 128 58.6
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 2.2e-36 156.0 138 58.0
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 2.2e-36 156.0 138 58.0
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 1.1e-35 153.7 135 54.8
CAN.G603.1 Capsicum annuum HOM05D004110 ORTHO05D004810 1.2e-34 150.2 136 56.6
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 2.1e-34 149.4 131 55.7
Potri.004G168700 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.1e-32 143.7 123 62.6
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 6.8e-30 134.4 124 56.5
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 6.8e-30 134.4 124 54.0
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 3.8e-28 128.6 124 54.8
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 2.3e-25 119.4 129 53.5
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 6.6e-25 117.9 88 64.8
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 2.8e-23 112.5 135 43.0
SHI05701 Sapria himalayana HOM05D004110 ORTHO05D004810 1.3e-20 103.6 136 48.5
SEGI_22669 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 1.1e-19 100.5 140 43.6
HPP92_005015 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.2e-18 97.1 128 42.2
Os10g0154600 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 2.3e-17 92.8 137 40.1
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 5.6e-16 88.2 139 37.4
COL.COLO4_17262 Corchorus olitorius HOM05D004110 ORTHO05D004810 9.6e-16 87.4 54 75.9
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 2.8e-15 85.9 151 37.7
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 2.4e-11 72.8 116 33.6
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 2.3e-09 66.2 116 35.3
SMO171G0108 Selaginella moellendorffii HOM05D004110 ORTHO05D004810 4.8e-07 58.5 116 26.7


User provided reference genes

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