Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.9e-189 665.6 328 100.0
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.5e-128 462.6 341 74.2
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.4e-123 444.9 317 75.7
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 3.0e-121 439.1 317 74.8
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 1.7e-113 413.3 317 70.7
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 6.9e-94 348.2 313 63.6
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 1.4e-91 340.5 316 63.3
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 5.8e-85 318.5 318 57.5
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 1.7e-84 317.0 309 58.9
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 9.3e-83 311.2 309 58.6
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 6.0e-82 308.5 308 59.1
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 2.3e-81 306.6 305 58.7
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.1e-80 304.3 309 57.3
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.5e-80 303.9 309 56.0
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 7.4e-80 301.6 309 57.9
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.1e-78 297.7 311 55.9
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.2e-77 294.3 316 55.4
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 2.0e-77 293.5 288 60.4
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 2.0e-77 293.5 305 58.0
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 4.5e-77 292.4 307 57.0
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 4.9e-76 288.9 261 63.2
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 9.3e-75 284.6 307 53.4
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 9.3e-75 284.6 318 55.3
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 1.2e-74 284.3 262 62.6
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.6e-74 283.9 313 54.0
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 2.1e-74 283.5 285 57.9
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 2.7e-74 283.1 312 56.7
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 4.6e-74 282.3 309 55.7
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 6.0e-74 282.0 267 60.7
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 7.9e-74 281.6 310 54.2
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 7.9e-74 281.6 310 54.2
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 7.9e-74 281.6 262 62.2
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 1.3e-73 280.8 308 54.5
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 1.3e-73 280.8 310 54.2
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 3.0e-73 279.6 304 56.2
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 3.0e-73 279.6 313 54.6
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 3.9e-73 279.3 262 60.3
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 3.9e-73 279.3 302 55.3
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 5.1e-73 278.9 265 60.8
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 5.1e-73 278.9 318 54.1
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 5.1e-73 278.9 269 60.2
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 1.1e-72 277.7 300 56.3
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.5e-72 277.3 314 54.8
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.5e-72 277.3 287 57.1
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 7.4e-72 275.0 302 54.6
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 9.6e-72 274.6 298 53.7
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.6e-71 273.9 307 52.1
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 2.1e-71 273.5 273 59.7
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 2.1e-71 273.5 310 53.9
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 3.7e-71 272.7 263 59.7
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 4.8e-71 272.3 267 59.9
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 6.3e-71 271.9 308 56.5
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 8.2e-71 271.6 306 54.9
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 1.8e-70 270.4 222 67.6
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 3.1e-70 269.6 313 53.7
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 4.1e-70 269.2 267 58.4
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 5.3e-70 268.9 314 53.2
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 2.0e-69 266.9 293 54.3
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 3.4e-69 266.2 283 56.5
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 4.5e-69 265.8 295 53.2
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 5.9e-69 265.4 272 57.4
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 1.0e-68 264.6 186 75.8
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 1.0e-68 264.6 272 57.0
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.0e-68 264.6 199 73.9
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.7e-68 263.8 179 78.8
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.2e-68 263.5 181 76.2
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 2.9e-68 263.1 185 75.1
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 3.8e-68 262.7 308 50.3
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 6.5e-68 261.9 186 75.3
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 8.5e-68 261.5 188 76.6
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.4e-67 260.8 257 58.4
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 1.9e-67 260.4 287 56.1
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.5e-67 260.0 181 75.1
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 4.2e-67 259.2 297 52.9
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 7.2e-67 258.5 316 50.3
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.6e-66 257.3 304 50.0
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 4.6e-66 255.8 295 51.5
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 4.6e-66 255.8 310 50.6
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 4.6e-66 255.8 310 50.6
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 1.0e-65 254.6 308 49.0
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 2.3e-65 253.4 308 50.0
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 2.3e-65 253.4 304 51.3
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.5e-64 250.8 271 54.2
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.9e-64 250.4 300 50.3
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.9e-64 250.4 314 49.4
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 1.9e-64 250.4 310 49.7
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 4.3e-64 249.2 309 50.2
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 7.4e-64 248.4 314 48.7
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 7.4e-64 248.4 314 48.7
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.2e-63 246.9 276 53.3
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 4.8e-63 245.7 315 49.2
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 8.2e-63 245.0 315 49.2
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 4.1e-62 242.7 300 50.7
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 3.4e-61 239.6 185 70.8
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.5e-59 233.4 202 65.8
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 5.5e-59 232.3 253 55.7
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.7e-58 229.9 255 55.3
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 6.1e-58 228.8 255 55.3
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 7.9e-58 228.4 178 70.8
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 3.9e-57 226.1 196 59.7
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 5.1e-57 225.7 214 58.9
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 1.1e-56 224.6 289 50.2
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.0e-56 223.8 210 56.7
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 2.0e-56 223.8 239 56.9
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 4.1e-54 216.1 214 57.5
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 6.9e-54 215.3 208 60.1
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 2.0e-53 213.8 251 53.4
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 5.9e-53 212.2 199 56.3
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 2.6e-48 196.8 205 56.1
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 1.6e-42 177.6 309 40.1
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 1.7e-39 167.5 215 48.4
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.6e-37 161.0 130 68.5
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 2.7e-37 160.2 185 51.4
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 7.5e-32 142.1 227 41.9
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 3.4e-24 116.7 78 74.4
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.3e-23 114.8 89 69.7
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.6e-20 102.4 61 82.0
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 7.3e-19 99.0 90 57.8
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 9.2e-14 82.0 93 51.6
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 4.6e-13 79.7 53 69.8


User provided reference genes

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