Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G2160 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.4e-119 433.0 215 100.0
FAN24G0847 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.3e-101 373.2 215 88.8
FvH4_2g22920 Fragaria vesca HOM05D000921 ORTHO05D004153 3.8e-101 371.7 215 88.4
FAN20G3205 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.8e-101 371.7 215 88.4
FAN15G1223 Fragaria x ananassa HOM05D000921 ORTHO05D004153 5.0e-101 371.3 215 88.4
Potri.005G215400 Populus trichocarpa HOM05D000921 ORTHO05D004153 7.9e-99 364.0 209 83.7
Manes.01G203800 Manihot esculenta HOM05D000921 ORTHO05D004153 9.7e-97 357.1 210 80.5
TWI12G1077 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 2.2e-96 355.9 210 82.4
Sabra05G0164600 Salix brachista HOM05D000921 ORTHO05D004153 2.8e-96 355.5 211 82.0
Sabra02G0038900 Salix brachista HOM05D000921 ORTHO05D004153 1.5e-94 349.7 211 79.6
RcHm_v2.0_Chr6g0289881 Rosa chinensis HOM05D000921 ORTHO05D004153 7.7e-94 347.4 215 82.3
TAR633G0413 Trochodendron aralioides HOM05D000921 ORTHO05D004153 1.4e-92 343.2 211 78.2
CAN.G1072.6 Capsicum annuum HOM05D000921 ORTHO05D004153 5.5e-92 341.3 214 72.9
CSS0010203 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 9.4e-92 340.5 207 78.3
ClCG09G007420 Citrullus lanatus HOM05D000921 ORTHO05D004153 2.7e-91 339.0 211 79.1
CsaV3_7G027700 Cucumis sativus L. HOM05D000921 ORTHO05D004153 2.7e-91 339.0 211 79.1
Sed0015319 Sechium edule HOM05D000921 ORTHO05D004153 2.7e-91 339.0 211 78.2
COL.COLO4_09186 Corchorus olitorius HOM05D000921 ORTHO05D004153 6.1e-91 337.8 210 79.0
CSS0042369 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 7.9e-91 337.4 207 77.8
Medtr1g071260 Medicago truncatula HOM05D000921 ORTHO05D004153 1.0e-90 337.0 210 76.7
Peaxi162Scf00259g00414 Petunia axillaris HOM05D000921 ORTHO05D004153 2.3e-90 335.9 210 73.8
SalBow4G3326 Salvia bowleyana HOM05D000921 ORTHO05D004153 2.3e-90 335.9 211 74.9
Duzib133G0456 Durio zibethinus HOM05D000921 ORTHO05D004153 3.0e-90 335.5 208 79.3
Lj1C56G6 Lonicera japonica HOM05D000921 ORTHO05D004153 3.9e-90 335.1 212 75.5
MSTRG.21525 Avicennia marina HOM05D000921 ORTHO05D004153 5.1e-90 334.7 211 74.9
Solyc09g065700.3 Solanum lycopersicum HOM05D000921 ORTHO05D004153 6.7e-90 334.3 212 72.2
Migut.D00355 Erythranthe guttata HOM05D000921 ORTHO05D004153 8.8e-90 334.0 207 75.4
THA.LOC104825985 Tarenaya hassleriana HOM05D000921 ORTHO05D004153 8.8e-90 334.0 209 75.1
Prupe.8G234500 Prunus persica HOM05D000921 ORTHO05D004153 1.5e-89 333.2 211 79.6
Sopen09g027450 Solanum pennellii HOM05D000921 ORTHO05D004153 2.0e-89 332.8 212 71.7
Cc01_g18990 Coffea canephora HOM05D000921 ORTHO05D004153 2.6e-89 332.4 211 75.8
Hund02865 Selenicereus undatus HOM05D000921 ORTHO05D004153 2.6e-89 332.4 211 74.4
Oeu002269.1 Olea europaea HOM05D000921 ORTHO05D004153 1.3e-88 330.1 211 73.5
CSS0032745 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 1.7e-88 329.7 210 73.8
Lj2C1164G7 Lonicera japonica HOM05D000921 ORTHO05D004153 4.8e-88 328.2 206 77.7
unitig_61.g26264 Utricularia gibba HOM05D000921 ORTHO05D004153 8.2e-88 327.4 212 74.5
AL1G12520 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 2.4e-87 325.9 211 73.0
AT1G03060 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 2.4e-87 325.9 211 73.0
Aa31LG1G9470 Aethionema arabicum HOM05D000921 ORTHO05D004153 3.1e-87 325.5 210 72.9
CARHR002410 Cardamine hirsuta HOM05D000921 ORTHO05D004153 9.1e-87 323.9 211 73.0
Thhalv10006519m.g Eutrema salsugineum HOM05D000921 ORTHO05D004153 1.2e-86 323.6 211 73.0
PGR044G0864 Punica granatum HOM05D000921 ORTHO05D004153 2.0e-86 322.8 211 75.8
Eucgr.K03323 Eucalyptus grandis HOM05D000921 ORTHO05D004153 3.5e-86 322.0 209 76.1
Sp1g02060 Schrenkiella parvula HOM05D000921 ORTHO05D004153 4.5e-86 321.6 211 72.5
BolC8t52810H Brassica oleracea HOM05D000921 ORTHO05D004153 5.9e-86 321.2 211 72.0
Carub.0006s3446 Capsella rubella HOM05D000921 ORTHO05D004153 7.7e-86 320.9 210 71.4
BcaC07g42269 Brassica carinata HOM05D000921 ORTHO05D004153 1.0e-85 320.5 211 72.0
MD03G1257800 Malus domestica HOM05D000921 ORTHO05D004153 1.0e-85 320.5 210 77.6
C08p52940 Brassica napus HOM05D000921 ORTHO05D004153 1.3e-85 320.1 211 72.0
SGA_v2.0_scaffold1G00535 Striga asiatica HOM05D000921 ORTHO05D004153 1.7e-85 319.7 209 70.3
A09p68370 Brassica napus HOM05D000921 ORTHO05D004153 2.9e-85 318.9 211 72.0
BraA09t42173Z Brassica rapa HOM05D000921 ORTHO05D004153 2.9e-85 318.9 211 72.0
Dinv22500 Davidia involucrata HOM05D000921 ORTHO05D004153 3.8e-85 318.5 209 74.6
MD11G1278500 Malus domestica HOM05D000921 ORTHO05D004153 8.5e-85 317.4 211 76.3
A10p01680 Brassica napus HOM05D000921 ORTHO05D004153 2.5e-84 315.8 211 70.6
BraA10t42445Z Brassica rapa HOM05D000921 ORTHO05D004153 2.5e-84 315.8 211 70.6
C05p01680 Brassica napus HOM05D000921 ORTHO05D004153 4.2e-84 315.1 211 70.6
BolC5t28947H Brassica oleracea HOM05D000921 ORTHO05D004153 4.2e-84 315.1 211 70.6
HanXRQChr04g0113931 Helianthus annuus HOM05D000921 ORTHO05D004153 4.2e-84 315.1 210 71.4
TWI18G0154 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 2.1e-83 312.8 210 73.3
ECA248G3113 Erigeron canadensis HOM05D000921 ORTHO05D004153 3.6e-83 312.0 209 73.2
AL6G50380 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 4.7e-83 311.6 210 70.5
Sp6g02580 Schrenkiella parvula HOM05D000921 ORTHO05D004153 3.0e-82 308.9 210 70.5
Gohir.A08G187300 Gossypium hirsutum HOM05D000921 ORTHO05D004153 6.7e-82 307.8 201 75.1
CDE04G2373 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 8.8e-82 307.4 206 68.0
HanXRQChr01g0005671 Helianthus annuus HOM05D000921 ORTHO05D004153 1.1e-81 307.0 209 69.9
AT4G02660 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 2.0e-81 306.2 210 67.6
ECA236G3737 Erigeron canadensis HOM05D000921 ORTHO05D004153 2.0e-81 306.2 209 68.9
Gohir.D08G205600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 2.0e-81 306.2 201 74.6
Lsat_1_v5_gn_5_185441 Lactuca sativa HOM05D000921 ORTHO05D004153 2.0e-81 306.2 212 70.8
CDE10G0462 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 4.4e-81 305.1 210 68.6
Haze_04641 Corylus avellana HOM05D000921 ORTHO05D004153 4.4e-81 305.1 211 73.5
CiPaw.07G086700 Carya illinoinensis HOM05D000921 ORTHO05D004153 7.5e-81 304.3 210 72.4
QL12p042334 Quercus lobata HOM05D000921 ORTHO05D004153 7.5e-81 304.3 208 73.1
Gorai.004G217600 Gossypium raimondii HOM05D000921 ORTHO05D004153 1.7e-80 303.1 201 73.6
Cfa006203 Carpinus fangiana HOM05D000921 ORTHO05D004153 2.2e-80 302.8 211 73.0
BcaB01g02481 Brassica carinata HOM05D000921 ORTHO05D004153 2.8e-80 302.4 210 68.1
HanXRQChr06g0177821 Helianthus annuus HOM05D000921 ORTHO05D004153 2.8e-80 302.4 210 68.6
Nn6g33594 Nelumbo nucifera HOM05D000921 ORTHO05D004153 6.3e-80 301.2 211 69.2
PSO210G1924 Papaver somniferum HOM05D000921 ORTHO05D004153 8.2e-80 300.8 213 70.4
Lsat_1_v5_gn_8_93941 Lactuca sativa HOM05D000921 ORTHO05D004153 7.7e-78 294.3 212 66.5
Os03g0744650 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004153 7.7e-78 294.3 211 66.4
CANSAT25G1208 Cannabis sativa HOM05D000921 ORTHO05D004153 1.0e-77 293.9 211 71.6
arahy.Tifrunner.gnm1.ann1.BT7PUB Arachis hypogaea HOM05D000921 ORTHO05D004153 1.3e-77 293.5 212 68.4
arahy.Tifrunner.gnm1.ann1.EGZY1N Arachis hypogaea HOM05D000921 ORTHO05D004153 1.3e-77 293.5 212 68.4
Atru.chr5.1523 Acer truncatum HOM05D000921 ORTHO05D004153 1.7e-77 293.1 212 70.3
Thecc.01G271200 Theobroma cacao HOM05D000921 ORTHO05D004153 6.5e-77 291.2 210 70.5
Potri.002G047700 Populus trichocarpa HOM05D000921 ORTHO05D004153 8.5e-77 290.8 211 69.7
A03p30920 Brassica napus HOM05D000921 ORTHO05D004153 1.5e-76 290.0 211 67.3
Dinv32883 Davidia involucrata HOM05D000921 ORTHO05D004153 1.5e-76 290.0 211 68.2
Ciclev10018426m.g Citrus clementina HOM05D000921 ORTHO05D004153 5.5e-76 288.1 213 69.0
Rhsim13G0028700 Rhododendron simsii HOM05D000921 ORTHO05D004153 7.2e-76 287.7 209 67.0
Hund09551 Selenicereus undatus HOM05D000921 ORTHO05D004153 7.2e-76 287.7 210 64.8
Cpa.g.sc52.121 Carica papaya HOM05D000921 ORTHO05D004153 9.4e-76 287.3 211 68.7
Ca_09726_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004153 1.2e-75 287.0 210 67.6
Duzib138G1896 Durio zibethinus HOM05D000921 ORTHO05D004153 1.2e-75 287.0 210 69.5
Aqoxy5G00390 Aquilegia oxysepala HOM05D000921 ORTHO05D004153 1.6e-75 286.6 211 67.3
vmacro02613 Vaccinium macrocarpon HOM05D000921 ORTHO05D004153 2.7e-75 285.8 210 66.2
ATR0665G073 Amborella trichopoda HOM05D000921 ORTHO05D004153 6.1e-75 284.6 209 67.0
Psat6g058840 Pisum sativum HOM05D000921 ORTHO05D004153 8.0e-75 284.3 210 67.1
Glyma.10G030000 Glycine max HOM05D000921 ORTHO05D004153 1.4e-74 283.5 210 67.6
Actinidia19962 Actinidia chinensis HOM05D000921 ORTHO05D004153 1.8e-74 283.1 210 66.2
Glyma.02G144200 Glycine max HOM05D000921 ORTHO05D004153 1.8e-74 283.1 210 67.6
Phvul.007G175300 Phaseolus vulgaris HOM05D000921 ORTHO05D004153 2.3e-74 282.7 210 67.1
SHI10018 Sapria himalayana HOM05D000921 ORTHO05D004153 3.0e-74 282.3 211 65.9
SEGI_14501 Sequoiadendron giganteum HOM05D000921 ORTHO05D004153 5.2e-74 281.6 229 62.9
Gohir.D11G131000 Gossypium hirsutum HOM05D000921 ORTHO05D004153 6.8e-74 281.2 210 67.6
AUR62011970 Chenopodium quinoa HOM05D000921 ORTHO05D004153 8.8e-74 280.8 210 65.7
AUR62032282 Chenopodium quinoa HOM05D000921 ORTHO05D004153 8.8e-74 280.8 210 65.7
Gorai.007G140000 Gossypium raimondii HOM05D000921 ORTHO05D004153 8.8e-74 280.8 210 67.6
DCAR_002700 Daucus carota HOM05D000921 ORTHO05D004153 1.5e-73 280.0 211 65.4
Gohir.A11G125600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 4.4e-73 278.5 210 66.7
Gohir.A08G045265 Gossypium hirsutum HOM05D000921 ORTHO05D004153 9.8e-73 277.3 210 65.2
Gorai.004G056400 Gossypium raimondii HOM05D000921 ORTHO05D004153 9.8e-73 277.3 210 65.7
Lj5g0027434 Lotus japonicus HOM05D000921 ORTHO05D004153 1.3e-72 276.9 210 65.2
Carub.0001s0220 Capsella rubella HOM05D000921 ORTHO05D004153 1.7e-72 276.6 211 64.0
TPR.G34892 Trifolium pratense HOM05D000921 ORTHO05D004153 1.7e-72 276.6 210 64.8
Nn1g00513 Nelumbo nucifera HOM05D000921 ORTHO05D004153 4.8e-72 275.0 211 64.5
Ah.11g050210 Amaranthus hybridus HOM05D000921 ORTHO05D004153 6.3e-72 274.6 211 64.9
EL10Ac5g10491 Beta vulgaris HOM05D000921 ORTHO05D004153 1.4e-71 273.5 210 65.7
Gohir.D08G055600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.8e-71 273.1 210 64.8
Lalb_Chr06g0162771 Lupinus albus HOM05D000921 ORTHO05D004153 3.1e-71 272.3 211 64.0
Lalb_Chr01g0019981 Lupinus albus HOM05D000921 ORTHO05D004153 7.0e-71 271.2 210 66.7
CARHR250960 Cardamine hirsuta HOM05D000921 ORTHO05D004153 4.2e-68 261.9 210 61.4
PSO461G0055 Papaver somniferum HOM05D000921 ORTHO05D004153 4.7e-67 258.5 209 59.3
BraA03t12271Z Brassica rapa HOM05D000921 ORTHO05D004153 8.0e-67 257.7 211 61.6
C03p37700 Brassica napus HOM05D000921 ORTHO05D004153 2.0e-65 253.1 210 61.0
BolC3t16059H Brassica oleracea HOM05D000921 ORTHO05D004153 2.0e-65 253.1 210 61.0
GSVIVG01003123001 Vitis vinifera HOM05D000921 ORTHO05D004153 2.0e-65 253.1 148 82.4
Zm00001eb056940 Zea mays HOM05D000921 ORTHO05D004153 3.4e-65 252.3 211 61.1
SMO236G0048 Selaginella moellendorffii HOM05D000921 ORTHO05D004153 4.9e-64 248.4 213 54.5
Pp3c5_2890 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.4e-63 246.9 216 56.9
Pp3c5_2897 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.4e-63 246.9 216 56.9
FAN20G0191 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.8e-63 246.5 202 67.3
BcaC01g06740 Brassica carinata HOM05D000921 ORTHO05D004153 4.1e-63 245.4 211 59.7
Pp3c6_26100 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.0e-62 243.0 217 56.2
Mapoly0082s0083 Marchantia polymorpha HOM05D000921 ORTHO05D004153 5.9e-62 241.5 230 51.7
Pp3c6_5700 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.4e-55 219.5 247 46.6
Pp3c6_5706 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.4e-55 219.5 247 46.6
Pp3c16_11700 Physcomitrium patens HOM05D000921 ORTHO05D004153 7.0e-55 218.0 247 45.3
Pp3c16_11705 Physcomitrium patens HOM05D000921 ORTHO05D004153 7.0e-55 218.0 247 45.3
AagrBONN_evm.TU.Sc2ySwM_117.1900 Anthoceros agrestis HOM05D000921 ORTHO05D004153 1.2e-54 217.2 233 48.1
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 3.1e-42 176.0 244 40.2
HPP92_021299 Vanilla planifolia HOM05D000921 ORTHO05D004153 3.8e-24 115.9 160 45.0
Haze_26709 Corylus avellana HOM05D000921 ORTHO05D004153 4.2e-15 85.9 166 36.7
Nn5g27419 Nelumbo nucifera HOM05D000921 ORTHO05D002852 6.2e-11 72.0 39 87.2
Cfa021767 Carpinus fangiana HOM05D000921 ORTHO05D004153 9.9e-09 64.7 133 33.8
SGA_v2.0_scaffold20G09023 Striga asiatica HOM05D000921 ORTHO05D405151 1.9e-07 60.5 42 61.9


User provided reference genes

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