Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1338 Fragaria x ananassa HOM05D002133 ORTHO05D202445 1.7e-91 339.3 171 100.0
FAN15G2993 Fragaria x ananassa HOM05D002133 ORTHO05D002256 1.4e-82 309.7 170 92.9
FAN24G2512 Fragaria x ananassa HOM05D002133 ORTHO05D002256 5.4e-82 307.8 173 91.3
FvH4_2g32270 Fragaria vesca HOM05D002133 ORTHO05D002256 1.6e-78 296.2 168 89.9
FAN20G3115 Fragaria x ananassa HOM05D002133 ORTHO05D002256 6.4e-51 204.5 170 67.1
RcHm_v2.0_Chr2g0094131 Rosa chinensis HOM05D002133 ORTHO05D002256 1.4e-29 133.7 150 50.0
FAN18G1869 Fragaria x ananassa HOM05D002133 ORTHO05D002256 5.8e-28 128.3 171 46.2
FAN19G2748 Fragaria x ananassa HOM05D002133 ORTHO05D002256 2.9e-27 125.9 172 45.3
FAN04G0376 Fragaria x ananassa HOM05D002133 ORTHO05D002256 4.9e-27 125.2 154 50.0
FvH4_1g08070 Fragaria vesca HOM05D002133 ORTHO05D002256 1.4e-26 123.6 171 46.2
FAN26G3182 Fragaria x ananassa HOM05D002133 ORTHO05D002256 4.9e-19 98.6 145 44.1
FAN26G1173 Fragaria x ananassa HOM05D002133 ORTHO05D002256 3.5e-17 92.4 171 38.6
MD10G1105600 Malus domestica HOM05D002133 ORTHO05D002256 5.3e-13 78.6 84 50.0
RcHm_v2.0_Chr6g0253771 Rosa chinensis HOM05D002133 ORTHO05D002256 4.5e-12 75.5 97 41.2
Prupe.3G276000 Prunus persica HOM05D002133 ORTHO05D002256 7.6e-12 74.7 109 41.3
FvH4_2g04330 Fragaria vesca HOM05D002133 ORTHO05D002256 5.0e-11 72.0 88 44.3
FAN15G1432 Fragaria x ananassa HOM05D002133 ORTHO05D002256 6.5e-11 71.6 96 41.7
TWI56G0614 Tripterygium wilfordii HOM05D002133 ORTHO05D002256 1.1e-10 70.9 99 38.4
DCAR_020073 Daucus carota HOM05D002133 ORTHO05D002256 2.5e-10 69.7 106 35.8
Gohir.A02G081200 Gossypium hirsutum HOM05D002133 ORTHO05D002256 3.2e-10 69.3 83 44.6
Prupe.8G144400 Prunus persica HOM05D002133 ORTHO05D002256 3.2e-10 69.3 81 45.7
Actinidia38102 Actinidia chinensis HOM05D002133 ORTHO05D002256 4.2e-10 68.9 106 37.7
Manes.18G045800 Manihot esculenta HOM05D002133 ORTHO05D002256 4.2e-10 68.9 80 46.2
Gohir.D02G088900 Gossypium hirsutum HOM05D002133 ORTHO05D002256 5.5e-10 68.6 83 43.4
Gorai.005G099600 Gossypium raimondii HOM05D002133 ORTHO05D002256 5.5e-10 68.6 83 43.4
Manes.05G181400 Manihot esculenta HOM05D002133 ORTHO05D002256 5.5e-10 68.6 80 46.2
Oeu037500.1 Olea europaea HOM05D002133 ORTHO05D002256 5.5e-10 68.6 83 44.6
vmacro21437 Vaccinium macrocarpon HOM05D002133 ORTHO05D002256 7.1e-10 68.2 126 33.3
MD15G1071000 Malus domestica HOM05D002133 ORTHO05D002256 9.3e-10 67.8 91 41.8
Dinv39230 Davidia involucrata HOM05D002133 ORTHO05D002256 1.2e-09 67.4 100 38.0
FAN15G1988 Fragaria x ananassa HOM05D002133 ORTHO05D002256 1.2e-09 67.4 83 42.2
Oeu048578.1 Olea europaea HOM05D002133 ORTHO05D002256 1.2e-09 67.4 83 44.6
RcHm_v2.0_Chr6g0309471 Rosa chinensis HOM05D002133 ORTHO05D002256 1.2e-09 67.4 83 42.2
CSS0038052 Camellia sinensis var. sinensis HOM05D002133 ORTHO05D002256 1.6e-09 67.0 88 40.9
SalBow7G0136 Salvia bowleyana HOM05D002133 ORTHO05D002256 1.6e-09 67.0 83 43.4
Atru.chr13.822 Acer truncatum HOM05D002133 ORTHO05D002256 2.1e-09 66.6 83 43.4
ECA246G3335 Erigeron canadensis HOM05D002133 ORTHO05D002256 2.1e-09 66.6 83 43.4
TAR376G0191 Trochodendron aralioides HOM05D002133 ORTHO05D002256 2.1e-09 66.6 91 40.7
TAR376G1139 Trochodendron aralioides HOM05D002133 ORTHO05D002256 2.1e-09 66.6 91 40.7
AT1G27760 Arabidopsis thaliana HOM05D002133 ORTHO05D002256 2.7e-09 66.2 106 35.8
Eucgr.F02256 Eucalyptus grandis HOM05D002133 ORTHO05D002256 2.7e-09 66.2 86 41.9
Lsat_1_v5_gn_4_131141 Lactuca sativa HOM05D002133 ORTHO05D002256 2.7e-09 66.2 83 44.6
TWI12G0489 Tripterygium wilfordii HOM05D002133 ORTHO05D002256 2.7e-09 66.2 99 37.4
CSS0028243 Camellia sinensis var. sinensis HOM05D002133 ORTHO05D002256 3.5e-09 65.9 80 43.8
MD08G1085800 Malus domestica HOM05D002133 ORTHO05D002256 3.5e-09 65.9 83 42.2
Prupe.1G423700 Prunus persica HOM05D002133 ORTHO05D002256 3.5e-09 65.9 80 42.5
Hund24035 Selenicereus undatus HOM05D002133 ORTHO05D002256 3.5e-09 65.9 83 42.2
CARHR027280 Cardamine hirsuta HOM05D002133 ORTHO05D002256 4.6e-09 65.5 106 36.8
CiPaw.07G175700 Carya illinoinensis HOM05D002133 ORTHO05D002256 4.6e-09 65.5 83 43.4
FvH4_2g33200 Fragaria vesca HOM05D002133 ORTHO05D002256 4.6e-09 65.5 83 41.0
FAN20G2377 Fragaria x ananassa HOM05D002133 ORTHO05D002256 4.6e-09 65.5 83 41.0
FAN24G1433 Fragaria x ananassa HOM05D002133 ORTHO05D002256 4.6e-09 65.5 83 41.0
FAN27G0263 Fragaria x ananassa HOM05D002133 ORTHO05D002256 4.6e-09 65.5 83 41.0
Lsat_1_v5_gn_6_112361 Lactuca sativa HOM05D002133 ORTHO05D002256 6.1e-09 65.1 83 43.4
SGA_v2.0_scaffold28G11825 Striga asiatica HOM05D002133 ORTHO05D002256 6.1e-09 65.1 83 43.4
AL1G41310 Arabidopsis lyrata HOM05D002133 ORTHO05D002256 7.9e-09 64.7 106 35.8
Duzib041G0730 Durio zibethinus HOM05D002133 ORTHO05D002256 7.9e-09 64.7 108 38.0
Thecc.02G116500 Theobroma cacao HOM05D002133 ORTHO05D002256 7.9e-09 64.7 91 42.9
BcaB03g13968 Brassica carinata HOM05D002133 ORTHO05D002256 1.0e-08 64.3 83 41.0
ClCG05G020570 Citrullus lanatus HOM05D002133 ORTHO05D002256 1.0e-08 64.3 125 35.2
DCAR_009883 Daucus carota HOM05D002133 ORTHO05D002256 1.0e-08 64.3 83 41.0
Migut.N02776 Erythranthe guttata HOM05D002133 ORTHO05D002256 1.0e-08 64.3 83 45.8
Nitab4.5_0003803g0030 Nicotiana tabacum HOM05D002133 ORTHO05D002256 1.0e-08 64.3 83 41.0
Potri.014G016800 Populus trichocarpa HOM05D002133 ORTHO05D002256 1.0e-08 64.3 83 43.4
Sabra02G0093600 Salix brachista HOM05D002133 ORTHO05D002256 1.0e-08 64.3 83 43.4
TAR381G1089 Trochodendron aralioides HOM05D002133 ORTHO05D002256 1.0e-08 64.3 83 39.8
PGR031G1293 Punica granatum HOM05D002133 ORTHO05D002256 1.3e-08 63.9 80 42.5
CAN.G724.13 Capsicum annuum HOM05D002133 ORTHO05D002256 1.8e-08 63.5 83 41.0
Haze_22448 Corylus avellana HOM05D002133 ORTHO05D002256 1.8e-08 63.5 83 41.0
Nitab4.5_0000164g0130 Nicotiana tabacum HOM05D002133 ORTHO05D002256 1.8e-08 63.5 83 41.0
Sp1g24010 Schrenkiella parvula HOM05D002133 ORTHO05D002256 1.8e-08 63.5 83 42.2
Cc10_g05710 Coffea canephora HOM05D002133 ORTHO05D002256 2.3e-08 63.2 80 42.5
MELO3C016813.2 Cucumis melo HOM05D002133 ORTHO05D002256 2.3e-08 63.2 83 43.4
Dinv44960 Davidia involucrata HOM05D002133 ORTHO05D002256 2.3e-08 63.2 103 35.9
Thhalv10007663m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 2.3e-08 63.2 83 42.2
TAR625G0071 Trochodendron aralioides HOM05D002133 ORTHO05D002256 2.3e-08 63.2 83 38.6
Actinidia22690 Actinidia chinensis HOM05D002133 ORTHO05D002256 3.0e-08 62.8 83 43.4
A07p11580 Brassica napus HOM05D002133 ORTHO05D002256 3.0e-08 62.8 83 41.0
Thhalv10017549m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 3.0e-08 62.8 83 43.4
Thhalv10017670m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 3.0e-08 62.8 83 43.4
HanXRQChr09g0266701 Helianthus annuus HOM05D002133 ORTHO05D002256 3.0e-08 62.8 83 43.4
Peaxi162Scf00081g01710 Petunia axillaris HOM05D002133 ORTHO05D002256 3.0e-08 62.8 83 41.0
Actinidia10193 Actinidia chinensis HOM05D002133 ORTHO05D002256 3.9e-08 62.4 91 39.6
MSTRG.22223 Avicennia marina HOM05D002133 ORTHO05D002256 3.9e-08 62.4 91 38.5
BcaC01g01568 Brassica carinata HOM05D002133 ORTHO05D002256 3.9e-08 62.4 80 42.5
BcaC05g26776 Brassica carinata HOM05D002133 ORTHO05D002256 3.9e-08 62.4 83 41.0
A09p38330 Brassica napus HOM05D002133 ORTHO05D002256 5.1e-08 62.0 83 41.0
Carub.0001s2628 Capsella rubella HOM05D002133 ORTHO05D002256 5.1e-08 62.0 106 34.0
Thhalv10001793m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 5.1e-08 62.0 83 42.2
Solyc12g088370.2 Solanum lycopersicum HOM05D002133 ORTHO05D002256 5.1e-08 62.0 103 35.0
BcaC06g35320 Brassica carinata HOM05D002133 ORTHO05D002256 6.7e-08 61.6 83 39.8
C07p17460 Brassica napus HOM05D002133 ORTHO05D002256 6.7e-08 61.6 83 39.8
BolC7t42251H Brassica oleracea HOM05D002133 ORTHO05D002256 6.7e-08 61.6 83 39.8
CsaV3_4G035010 Cucumis sativus L. HOM05D002133 ORTHO05D002256 6.7e-08 61.6 83 42.2
Duzib116G0883 Durio zibethinus HOM05D002133 ORTHO05D002256 6.7e-08 61.6 83 41.0
PGSC0003DMG400011546 Solanum tuberosum HOM05D002133 ORTHO05D002256 6.7e-08 61.6 103 35.0
PGSC0003DMG400021507 Solanum tuberosum HOM05D002133 ORTHO05D002256 6.7e-08 61.6 83 41.0
CANSAT25G1442 Cannabis sativa HOM05D002133 ORTHO05D002256 8.7e-08 61.2 83 41.0
Ciclev10001181m.g Citrus clementina HOM05D002133 ORTHO05D002256 8.7e-08 61.2 83 41.0
Gorai.013G050400 Gossypium raimondii HOM05D002133 ORTHO05D002256 8.7e-08 61.2 80 41.2
HanXRQChr01g0027951 Helianthus annuus HOM05D002133 ORTHO05D002256 8.7e-08 61.2 106 33.0
Potri.002G119100 Populus trichocarpa HOM05D002133 ORTHO05D002256 8.7e-08 61.2 83 42.2
Sed0019340 Sechium edule HOM05D002133 ORTHO05D002256 8.7e-08 61.2 83 41.0
MSTRG.24371 Avicennia marina HOM05D002133 ORTHO05D002256 1.1e-07 60.8 83 41.0
BcaB08g34833 Brassica carinata HOM05D002133 ORTHO05D002256 1.1e-07 60.8 80 41.2
BcaC01g01569 Brassica carinata HOM05D002133 ORTHO05D002256 1.1e-07 60.8 80 41.2
BcaNung06154 Brassica carinata HOM05D002133 ORTHO05D002256 1.1e-07 60.8 83 41.0
Duzib093G0932 Durio zibethinus HOM05D002133 ORTHO05D002256 1.5e-07 60.5 83 41.0
Gohir.D13G042500 Gossypium hirsutum HOM05D002133 ORTHO05D002256 1.5e-07 60.5 80 41.2
Lalb_Chr22g0355651 Lupinus albus HOM05D002133 ORTHO05D002256 1.9e-07 60.1 87 41.4
THA.LOC104820516 Tarenaya hassleriana HOM05D002133 ORTHO05D002256 1.9e-07 60.1 83 39.8
A08p26060 Brassica napus HOM05D002133 ORTHO05D002256 2.5e-07 59.7 83 41.0
BraA08t34556Z Brassica rapa HOM05D002133 ORTHO05D002256 2.5e-07 59.7 83 41.0
Gohir.A05G209400 Gossypium hirsutum HOM05D002133 ORTHO05D002256 2.5e-07 59.7 83 38.6
Gohir.D05G212800 Gossypium hirsutum HOM05D002133 ORTHO05D002256 2.5e-07 59.7 83 38.6
Gorai.009G219300 Gossypium raimondii HOM05D002133 ORTHO05D002256 2.5e-07 59.7 83 38.6
Thecc.02G114600 Theobroma cacao HOM05D002133 ORTHO05D002256 2.5e-07 59.7 78 37.2
arahy.Tifrunner.gnm1.ann1.VTP83K Arachis hypogaea HOM05D002133 ORTHO05D002256 3.3e-07 59.3 87 41.4
Gohir.A13G046500 Gossypium hirsutum HOM05D002133 ORTHO05D002256 3.3e-07 59.3 80 41.2
arahy.Tifrunner.gnm1.ann1.KXTN9G Arachis hypogaea HOM05D002133 ORTHO05D002256 4.3e-07 58.9 87 41.4
Ca_15902_v3 Cicer arietinum L. HOM05D002133 ORTHO05D002256 4.3e-07 58.9 87 39.1
Lj1g0026971 Lotus japonicus HOM05D002133 ORTHO05D002256 4.3e-07 58.9 87 39.1
Solyc04g077920.3 Solanum lycopersicum HOM05D002133 ORTHO05D002256 4.3e-07 58.9 83 38.6
Sopen04g031520 Solanum pennellii HOM05D002133 ORTHO05D002256 4.3e-07 58.9 83 38.6
GSVIVG01009354001 Vitis vinifera HOM05D002133 ORTHO05D002256 4.3e-07 58.9 83 39.8
Glyma.04G045600 Glycine max HOM05D002133 ORTHO05D002256 5.7e-07 58.5 87 39.1
Glyma.06G046300 Glycine max HOM05D002133 ORTHO05D002256 5.7e-07 58.5 87 39.1
Lj5g0009817 Lotus japonicus HOM05D002133 ORTHO05D002256 5.7e-07 58.5 87 39.1
Phvul.009G071500 Phaseolus vulgaris HOM05D002133 ORTHO05D002256 5.7e-07 58.5 87 39.1
Rhsim06G0061800 Rhododendron simsii HOM05D002133 ORTHO05D002256 5.7e-07 58.5 97 36.1
THA.LOC104814188 Tarenaya hassleriana HOM05D002133 ORTHO05D002256 5.7e-07 58.5 104 34.6
Oeu037279.1 Olea europaea HOM05D002133 ORTHO05D002256 7.4e-07 58.2 84 41.7
Thecc.08G089800 Theobroma cacao HOM05D002133 ORTHO05D002256 7.4e-07 58.2 83 39.8
EL10Ac1g02389 Beta vulgaris HOM05D002133 ORTHO05D002256 9.7e-07 57.8 83 38.6
Cpa.g.sc142.18 Carica papaya HOM05D002133 ORTHO05D002256 9.7e-07 57.8 83 37.3
AUR62022485 Chenopodium quinoa HOM05D002133 ORTHO05D002256 9.7e-07 57.8 83 38.6
Lsat_1_v5_gn_3_33441 Lactuca sativa HOM05D002133 ORTHO05D002256 9.7e-07 57.8 98 38.8
PSO170G0233 Papaver somniferum HOM05D002133 ORTHO05D002256 9.7e-07 57.8 84 40.5
Aa31sc113G50 Aethionema arabicum HOM05D002133 ORTHO05D002256 1.3e-06 57.4 88 37.5
Actinidia00374 Actinidia chinensis HOM05D002133 ORTHO05D002256 1.6e-06 57.0 90 35.6
CANSAT80G1456 Cannabis sativa HOM05D002133 ORTHO05D002256 1.6e-06 57.0 83 39.8
Nn5g30562 Nelumbo nucifera HOM05D002133 ORTHO05D002256 1.6e-06 57.0 73 42.5
arahy.Tifrunner.gnm1.ann1.68HS6I Arachis hypogaea HOM05D002133 ORTHO05D002256 2.2e-06 56.6 87 39.1
arahy.Tifrunner.gnm1.ann1.C26UD9 Arachis hypogaea HOM05D002133 ORTHO05D002256 2.2e-06 56.6 87 39.1
C03p74600 Brassica napus HOM05D002133 ORTHO05D002256 2.2e-06 56.6 86 40.7
BolC3t19708H Brassica oleracea HOM05D002133 ORTHO05D002256 2.2e-06 56.6 86 40.7
Nitab4.5_0002968g0020 Nicotiana tabacum HOM05D002133 ORTHO05D002256 2.2e-06 56.6 83 36.1
VMungo1309G1787 Vigna mungo HOM05D002133 ORTHO05D002256 2.2e-06 56.6 87 37.9
Glyma.17G235100 Glycine max HOM05D002133 ORTHO05D002256 2.8e-06 56.2 87 37.9
DCAR_016840 Daucus carota HOM05D002133 ORTHO05D002256 3.7e-06 55.8 86 39.5
HanXRQChr06g0175321 Helianthus annuus HOM05D002133 ORTHO05D002256 3.7e-06 55.8 103 31.1
QL12p037925 Quercus lobata HOM05D002133 ORTHO05D002256 3.7e-06 55.8 128 32.0
unitig_578.g16147 Utricularia gibba HOM05D002133 ORTHO05D002256 3.7e-06 55.8 116 31.9
FAN27G1056 Fragaria x ananassa HOM05D002133 ORTHO05D002256 4.8e-06 55.5 57 47.4
Nitab4.5_0001298g0040 Nicotiana tabacum HOM05D002133 ORTHO05D002256 4.8e-06 55.5 110 32.7
PSO675G0857 Papaver somniferum HOM05D002133 ORTHO05D002256 4.8e-06 55.5 89 34.8
Duzib052G0091 Durio zibethinus HOM05D002133 ORTHO05D002256 6.3e-06 55.1 83 36.1
Ah.11g039780 Amaranthus hybridus HOM05D002133 ORTHO05D002256 8.2e-06 54.7 80 37.5
Dinv04580 Davidia involucrata HOM05D002133 ORTHO05D002256 8.2e-06 54.7 84 35.7
FAN20G1995 Fragaria x ananassa HOM05D002133 ORTHO05D002256 8.2e-06 54.7 57 47.4
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 8.2e-06 54.7 56 48.2


User provided reference genes

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