Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1057 Fragaria x ananassa HOM05D004110 ORTHO05D004810 0.0e+00 1295.4 666 100.0
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 6.3e-288 993.8 515 100.0
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 3.8e-285 984.6 545 94.1
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 3.6e-283 978.0 515 98.4
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.7e-283 977.6 515 98.3
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 7.0e-263 910.6 543 87.7
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 5.5e-223 778.1 520 78.5
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 3.1e-218 762.3 526 76.0
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 5.3e-186 655.2 533 64.0
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 1.3e-179 634.0 535 62.4
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 4.1e-178 629.0 521 65.3
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 1.0e-173 614.4 545 60.2
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.2e-172 610.9 537 60.5
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 2.6e-172 609.8 548 59.9
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 4.8e-171 605.5 548 59.7
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 3.1e-170 602.8 512 65.8
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 5.4e-170 602.1 522 62.5
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 5.5e-167 592.0 512 65.2
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.8e-165 587.0 517 61.5
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 3.0e-165 586.3 539 59.4
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 5.2e-165 585.5 550 58.9
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 3.4e-164 582.8 521 62.4
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 2.4e-162 576.6 508 61.8
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 2.0e-161 573.5 516 61.2
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 4.5e-161 572.4 527 59.8
MD10G1119600 Malus domestica HOM05D004110 ORTHO05D004810 5.9e-161 572.0 390 77.4
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 2.8e-158 563.1 531 59.3
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 3.6e-158 562.8 538 58.6
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 4.4e-156 555.8 512 59.6
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 4.6e-153 545.8 517 59.2
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 8.0e-150 535.0 558 54.3
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 8.0e-150 535.0 534 56.4
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 2.3e-149 533.5 542 55.2
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 1.5e-148 530.8 510 54.5
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 9.8e-148 528.1 521 55.3
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 2.2e-147 526.9 514 55.8
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 2.9e-147 526.6 510 54.9
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 3.7e-147 526.2 518 55.4
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 2.4e-146 523.5 516 55.0
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 3.2e-146 523.1 535 53.5
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 9.2e-146 521.5 510 57.3
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 6.0e-145 518.8 510 54.5
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 1.0e-144 518.1 560 53.4
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.3e-144 517.7 548 51.8
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 8.6e-144 515.0 510 54.1
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 4.3e-143 512.7 548 53.6
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 2.1e-142 510.4 545 53.8
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 1.1e-141 508.1 521 55.3
CARHR294450 Cardamine hirsuta HOM05D004110 ORTHO05D004810 1.5e-140 504.2 518 53.1
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 2.0e-140 503.8 527 53.1
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 3.4e-140 503.1 514 54.1
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 1.3e-139 501.1 539 51.9
ClCG02G011600 Citrullus lanatus HOM05D004110 ORTHO05D004810 2.2e-139 500.4 517 55.7
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 8.3e-139 498.4 527 52.4
MELO3C020789.2 Cucumis melo HOM05D004110 ORTHO05D004810 1.4e-138 497.7 526 54.4
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 2.4e-138 496.9 526 52.9
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 2.4e-138 496.9 526 52.9
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 4.6e-137 492.7 527 52.2
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 6.0e-137 492.3 526 52.3
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 6.0e-137 492.3 526 52.3
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 1.3e-136 491.1 528 53.4
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 2.3e-136 490.3 518 51.7
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 1.9e-135 487.3 528 51.7
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 5.6e-135 485.7 549 50.8
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 1.2e-129 468.0 530 49.1
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 1.6e-129 467.6 540 49.8
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 2.1e-129 467.2 537 49.2
Nitab4.5_0006590g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.7e-129 466.8 540 49.6
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 3.0e-128 463.4 574 49.5
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.9e-127 460.7 547 48.4
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 2.5e-127 460.3 574 49.3
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 2.1e-126 457.2 552 48.4
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 2.4e-125 453.8 524 48.9
CAN.G603.1 Capsicum annuum HOM05D004110 ORTHO05D004810 1.1e-122 444.9 512 49.6
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 1.4e-122 444.5 529 48.2
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 9.3e-122 441.8 540 47.8
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 1.6e-121 441.0 514 47.7
Glyma.11G098600 Glycine max HOM05D004110 ORTHO05D004810 2.7e-121 440.3 366 62.8
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 7.8e-121 438.7 516 46.7
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 2.5e-119 433.7 540 46.9
AUR62010090 Chenopodium quinoa HOM05D004110 ORTHO05D004810 6.2e-118 429.1 513 47.4
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 2.9e-115 420.2 538 45.2
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 9.3e-114 415.2 513 46.6
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 1.6e-113 414.5 520 45.6
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 6.0e-113 412.5 514 45.9
Potri.004G168700 Populus trichocarpa HOM05D004110 ORTHO05D004810 3.7e-110 403.3 540 48.9
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 3.4e-108 396.7 532 44.9
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 8.4e-99 365.5 506 44.7
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 3.5e-97 360.1 524 41.8
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 1.8e-93 347.8 478 44.8
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 1.3e-86 325.1 507 41.0
SHI05701 Sapria himalayana HOM05D004110 ORTHO05D004810 1.5e-84 318.2 507 40.2
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 3.2e-82 310.5 514 37.0
Os10g0154600 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 2.3e-72 277.7 506 36.2
FAN27G2584 Fragaria x ananassa HOM05D004110 ORTHO05D004810 3.0e-72 277.3 142 97.9
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 2.0e-71 274.6 503 36.0
SEGI_22669 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 4.4e-71 273.5 546 36.3
COL.COLO4_17262 Corchorus olitorius HOM05D004110 ORTHO05D004810 1.4e-69 268.5 206 65.5
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 9.4e-58 229.2 241 52.3
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 8.3e-54 216.1 556 29.1
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 1.6e-52 211.8 523 31.5
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 2.5e-50 204.5 569 28.6
HPP92_005015 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.4e-48 198.7 421 33.0
SMO171G0108 Selaginella moellendorffii HOM05D004110 ORTHO05D004810 1.5e-34 152.1 382 29.3
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 2.5e-26 124.8 520 24.4
BcaB03g12223 Brassica carinata HOM05D004110 ORTHO05D004810 8.1e-09 66.6 61 59.0
HPP92_005007 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.3e-06 59.3 156 30.8


User provided reference genes

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