Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-45 185.3 86 100.0
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 5.7e-40 167.2 84 91.7
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.7e-40 167.2 84 91.7
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.4e-25 119.4 85 71.8
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 6.6e-12 73.9 82 46.3
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.9e-11 72.4 83 45.8
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 4.2e-11 71.2 82 47.6
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 4.2e-11 71.2 82 45.1
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.5e-11 70.9 69 52.2
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.2e-11 70.5 69 53.6
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.2e-11 70.5 69 53.6
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 7.2e-11 70.5 78 47.4
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 9.5e-11 70.1 82 47.6
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.5e-11 70.1 82 46.3
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-10 69.7 63 54.0
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 1.6e-10 69.3 69 52.2
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.6e-10 69.3 82 46.3
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 2.1e-10 68.9 63 54.0
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.1e-10 68.9 75 48.0
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 2.1e-10 68.9 75 48.0
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 2.1e-10 68.9 80 43.8
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.8e-10 68.6 75 48.0
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 2.8e-10 68.6 80 42.5
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 2.8e-10 68.6 84 40.5
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 3.6e-10 68.2 63 50.8
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 3.6e-10 68.2 63 52.4
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 4.7e-10 67.8 84 39.3
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 4.7e-10 67.8 63 49.2
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 6.1e-10 67.4 63 50.8
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 6.1e-10 67.4 62 53.2
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.0e-09 66.6 83 42.2
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 1.4e-09 66.2 75 42.7
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 1.4e-09 66.2 63 52.4
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.8e-09 65.9 75 42.7
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.8e-09 65.9 82 46.3
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.8e-09 65.9 82 46.3
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.8e-09 65.9 82 43.9
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 2.3e-09 65.5 75 38.7
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 2.3e-09 65.5 75 38.7
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.3e-09 65.5 75 38.7
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 2.3e-09 65.5 63 50.8
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 3.0e-09 65.1 74 40.5
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 3.0e-09 65.1 75 38.7
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 3.0e-09 65.1 75 38.7
FAN24G2079 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.0e-09 65.1 42 81.0
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 3.0e-09 65.1 82 42.7
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.0e-09 65.1 76 47.4
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 4.0e-09 64.7 75 41.3
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 4.0e-09 64.7 75 41.3
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 4.0e-09 64.7 76 48.7
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 4.0e-09 64.7 76 47.4
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 5.2e-09 64.3 63 49.2
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 5.2e-09 64.3 63 49.2
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 5.2e-09 64.3 63 47.6
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 6.8e-09 63.9 63 46.0
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 6.8e-09 63.9 63 49.2
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 8.9e-09 63.5 63 49.2
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 8.9e-09 63.5 89 41.6
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 8.9e-09 63.5 76 47.4
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 8.9e-09 63.5 63 44.4
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 1.2e-08 63.2 82 40.2
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 1.2e-08 63.2 63 47.6
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 1.2e-08 63.2 63 47.6
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 1.5e-08 62.8 75 45.3
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 1.5e-08 62.8 76 46.1
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 2.6e-08 62.0 82 40.2
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.6e-08 62.0 62 51.6
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 7.5e-08 60.5 63 47.6
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 7.5e-08 60.5 78 44.9
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 7.5e-08 60.5 54 48.1
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 9.8e-08 60.1 63 42.9
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.3e-07 59.7 75 40.0
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.3e-07 59.7 84 39.3
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.3e-07 59.7 72 41.7
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.7e-07 59.3 78 38.5
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 2.2e-07 58.9 86 44.2
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 2.2e-07 58.9 76 43.4
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.2e-07 58.9 63 46.0
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 2.2e-07 58.9 75 37.3
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 2.2e-07 58.9 82 37.8
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 2.8e-07 58.5 78 38.5
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 3.7e-07 58.2 63 42.9
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 4.9e-07 57.8 63 47.6
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 4.9e-07 57.8 63 44.4
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 4.9e-07 57.8 63 44.4
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.1e-06 56.6 82 39.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 1.4e-06 56.2 75 37.3
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 1.4e-06 56.2 78 34.6
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 5.4e-06 54.3 63 41.3
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 5.4e-06 54.3 48 56.2
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 7.0e-06 53.9 62 43.5
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 7.0e-06 53.9 63 41.3


User provided reference genes

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