Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.9e-100 369.4 212 100.0
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 8.4e-85 317.4 214 90.7
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 2.7e-83 312.4 214 89.7
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.6e-80 303.1 208 87.5
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 2.9e-77 292.4 215 83.7
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 3.7e-56 222.2 215 63.3
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 9.0e-55 217.6 201 59.7
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 2.0e-54 216.5 209 59.3
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 7.2e-52 208.0 207 57.0
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 6.1e-51 204.9 207 56.5
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 7.9e-51 204.5 209 55.0
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.0e-50 204.1 211 56.4
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.0e-50 204.1 210 55.7
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 2.3e-50 203.0 210 55.2
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 3.9e-50 202.2 209 55.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.9e-50 202.2 211 54.5
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 2.0e-49 199.9 208 54.3
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 2.0e-49 199.9 215 59.5
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 3.3e-49 199.1 216 51.9
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 1.7e-48 196.8 208 59.6
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 4.8e-48 195.3 210 58.1
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 4.8e-48 195.3 211 51.7
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 4.8e-48 195.3 211 53.1
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.1e-47 194.1 208 59.1
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.4e-47 193.7 208 58.7
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 3.1e-47 192.6 208 58.2
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 6.9e-47 191.4 212 57.1
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 9.1e-47 191.0 214 51.9
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.2e-46 190.7 211 51.7
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 1.2e-46 190.7 214 56.1
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.0e-46 189.9 214 57.0
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 2.6e-46 189.5 209 50.2
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 3.4e-46 189.1 210 50.5
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 3.4e-46 189.1 212 55.7
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 4.5e-46 188.7 208 54.3
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 5.9e-46 188.3 211 54.0
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 1.1e-44 184.1 208 52.4
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.4e-44 183.7 209 49.8
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 1.4e-44 183.7 211 56.9
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.9e-44 183.3 206 53.4
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 9.4e-44 181.0 212 49.5
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 9.4e-44 181.0 207 57.5
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.6e-43 180.3 209 52.2
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.6e-43 180.3 209 51.7
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 2.1e-43 179.9 213 50.7
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 2.1e-43 179.9 217 50.7
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 3.6e-43 179.1 211 53.1
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 4.7e-43 178.7 206 50.5
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 4.7e-43 178.7 206 50.0
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 1.4e-42 177.2 206 50.5
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 3.0e-42 176.0 215 55.8
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 3.9e-42 175.6 208 49.5
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 8.8e-42 174.5 207 49.3
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 1.1e-41 174.1 223 51.1
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.1e-41 174.1 210 53.3
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.0e-41 173.3 221 52.9
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 2.0e-41 173.3 209 48.8
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 2.0e-41 173.3 208 48.6
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 2.6e-41 172.9 208 47.6
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.6e-41 172.9 209 50.2
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 5.7e-41 171.8 207 48.3
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 2.2e-40 169.9 211 54.0
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 3.7e-40 169.1 212 49.5
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.3e-40 168.3 195 57.4
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 1.4e-39 167.2 197 50.3
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 1.8e-39 166.8 196 54.1
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 2.4e-39 166.4 209 47.8
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 2.4e-39 166.4 214 46.7
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 3.1e-39 166.0 209 49.8
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 7.0e-39 164.9 172 54.1
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 9.1e-39 164.5 208 47.1
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 1.2e-38 164.1 210 45.7
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 1.2e-38 164.1 220 46.8
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 2.0e-38 163.3 210 45.7
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 2.0e-38 163.3 208 47.1
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 2.6e-38 162.9 210 45.7
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 2.6e-38 162.9 294 38.8
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 4.5e-38 162.2 210 45.2
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 5.9e-38 161.8 210 45.2
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 7.7e-38 161.4 210 45.2
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.0e-37 161.0 210 51.4
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 1.3e-37 160.6 209 45.9
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 8.5e-37 157.9 208 52.4
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 1.1e-36 157.5 210 46.7
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.5e-36 157.1 265 39.2
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 4.2e-36 155.6 208 45.7
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 1.6e-35 153.7 187 54.0
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 2.7e-35 152.9 207 44.0
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 4.7e-35 152.1 210 51.4
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 1.0e-34 151.0 162 52.5
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 2.3e-34 149.8 182 54.9
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 4.0e-34 149.1 199 43.2
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 8.8e-34 147.9 215 46.5
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 1.1e-33 147.5 198 45.5
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 1.5e-33 147.1 237 40.1
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 2.0e-33 146.7 257 38.1
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 3.3e-33 146.0 163 49.1
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 7.0e-31 138.3 244 40.2
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 4.4e-25 119.0 211 38.9
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 4.5e-22 109.0 150 51.3
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 3.2e-20 102.8 203 41.9
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 7.2e-20 101.7 167 40.7
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.2e-17 94.4 212 38.7
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 6.3e-16 88.6 210 32.4
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 5.0e-13 79.0 81 49.4
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 8.6e-13 78.2 122 49.2
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.2e-09 67.8 56 58.9
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.6e-09 66.6 86 51.2
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 5.7e-09 65.5 73 46.6
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 7.5e-09 65.1 152 42.8
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 8.3e-08 61.6 70 50.0
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 9.2e-07 58.2 75 41.3
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 9.2e-07 58.2 77 50.6
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 9.2e-07 58.2 100 37.0


User provided reference genes

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