Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.0e-73 280.0 143 100.0
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 2.2e-73 278.9 143 99.3
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.2e-73 278.9 143 99.3
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 6.5e-73 277.3 143 98.6
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 6.7e-70 267.3 143 95.8
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 6.3e-68 260.8 145 90.3
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 3.8e-65 251.5 145 89.7
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.6e-63 246.1 144 86.8
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 2.7e-63 245.4 146 85.6
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 3.6e-63 245.0 140 88.6
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.7e-63 244.6 140 86.4
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.4e-62 243.0 144 86.1
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.4e-62 243.0 144 85.4
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 1.4e-62 243.0 144 85.4
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 83.4
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 2.0e-61 239.2 143 83.2
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 4.4e-61 238.0 142 85.9
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 5.7e-61 237.7 144 83.3
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 7.4e-61 237.3 142 85.9
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 1.7e-60 236.1 143 81.8
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.2e-60 235.7 142 83.1
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 2.8e-60 235.3 145 84.1
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 2.8e-60 235.3 146 82.9
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 2.8e-60 235.3 144 83.3
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 8.2e-60 233.8 142 82.4
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 8.2e-60 233.8 142 82.4
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 1.8e-59 232.6 145 82.1
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.8e-59 232.6 157 78.3
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 1.8e-59 232.6 143 82.5
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 2.4e-59 232.3 143 84.6
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 3.1e-59 231.9 145 82.1
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 5.3e-59 231.1 143 83.2
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 5.3e-59 231.1 143 81.1
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 5.3e-59 231.1 142 82.4
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 7.0e-59 230.7 144 81.9
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 9.1e-59 230.3 145 81.4
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 9.1e-59 230.3 145 82.1
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 9.1e-59 230.3 143 81.8
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.2e-58 229.9 143 82.5
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.2e-58 229.9 144 79.9
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 80.7
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 1.6e-58 229.6 146 81.5
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.0e-58 229.2 145 80.7
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 2.0e-58 229.2 145 80.7
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 2.0e-58 229.2 145 80.7
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 2.0e-58 229.2 145 80.7
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 2.6e-58 228.8 145 82.1
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.6e-58 228.8 143 82.5
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 3.5e-58 228.4 145 81.4
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.5e-58 228.4 145 82.1
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 4.5e-58 228.0 145 80.0
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 5.9e-58 227.6 145 80.0
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 5.9e-58 227.6 145 80.0
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 5.9e-58 227.6 145 79.3
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 5.9e-58 227.6 144 79.9
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 7.7e-58 227.3 145 80.0
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 7.7e-58 227.3 141 82.3
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.0e-57 226.9 145 81.4
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.7e-57 226.1 145 82.8
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.7e-57 226.1 145 80.0
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 2.2e-57 225.7 132 85.6
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 2.2e-57 225.7 134 84.3
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 2.2e-57 225.7 145 82.1
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.5e-56 223.0 143 79.0
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.5e-56 223.0 145 81.4
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 78.6
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 78.6
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 78.6
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 78.6
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 78.6
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 78.6
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.5e-56 222.2 144 80.6
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.2e-56 221.9 143 78.3
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 3.2e-56 221.9 130 86.9
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 3.2e-56 221.9 147 81.6
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.2e-56 221.9 145 81.4
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 3.2e-56 221.9 145 80.0
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 4.2e-56 221.5 146 80.8
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 4.2e-56 221.5 145 81.4
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 5.5e-56 221.1 132 85.6
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.5e-56 221.1 145 80.7
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 5.5e-56 221.1 145 80.7
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 7.2e-56 220.7 143 76.9
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 9.4e-56 220.3 132 84.1
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.2e-55 219.9 145 77.9
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.2e-55 219.9 147 83.0
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.6e-55 219.5 145 77.9
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 1.6e-55 219.5 145 81.4
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 2.1e-55 219.2 145 80.0
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.1e-55 219.2 144 77.8
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 2.7e-55 218.8 146 80.8
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.6e-55 218.4 143 78.3
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 6.1e-55 217.6 146 82.2
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 6.1e-55 217.6 146 82.2
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 1.0e-54 216.9 143 79.0
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 1.8e-54 216.1 145 79.3
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 1.8e-54 216.1 146 81.5
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.8e-54 216.1 146 77.4
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 2.3e-54 215.7 143 77.6
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 80.7
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.0e-54 214.9 145 80.7
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 5.2e-54 214.5 143 76.2
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 1.2e-53 213.4 144 78.5
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 1.5e-53 213.0 145 78.6
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.0e-53 212.6 141 79.4
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 2.6e-53 212.2 147 78.2
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 4.4e-53 211.5 146 77.4
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 5.7e-53 211.1 144 77.1
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 9.7e-53 210.3 123 85.4
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 3.7e-52 208.4 143 78.3
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 4.8e-52 208.0 145 76.6
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 6.3e-52 207.6 143 79.0
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 6.3e-52 207.6 201 59.7
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 8.2e-52 207.2 145 77.2
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 2.4e-51 205.7 135 80.7
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.1e-51 205.3 145 77.2
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.1e-51 205.3 145 77.2
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 3.1e-51 205.3 145 77.2
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 7.0e-51 204.1 150 75.3
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.5e-50 201.4 150 74.7
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 5.9e-50 201.1 144 75.0
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 5.9e-50 201.1 146 78.1
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 5.9e-50 201.1 181 66.3
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 7.7e-50 200.7 147 74.1
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.0e-49 200.3 128 81.2
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 3.8e-49 198.4 145 75.2
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 3.8e-49 198.4 145 75.2
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 3.8e-49 198.4 145 75.2
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 5.0e-49 198.0 144 75.0
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 1.1e-48 196.8 145 71.0
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 9.4e-48 193.7 132 77.3
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.1e-47 192.6 145 72.4
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 6.1e-47 191.0 144 72.9
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.0e-46 188.7 168 63.7
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 6.8e-46 187.6 145 73.1
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 6.8e-46 187.6 142 73.2
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 8.8e-46 187.2 119 81.5
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.0e-45 186.0 143 72.0
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 7.5e-45 184.1 145 71.7
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.7e-44 183.0 147 69.4
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 2.8e-44 182.2 99 89.9
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 3.7e-44 181.8 145 69.0
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 8.3e-44 180.6 133 75.9
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.2e-42 176.8 146 68.5
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 2.0e-42 176.0 138 69.6
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-41 173.7 134 72.4
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.3e-41 172.6 95 86.3
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 2.3e-41 172.6 121 79.3
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 2.9e-41 172.2 131 71.8
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.5e-41 171.0 121 79.3
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.5e-40 169.1 135 72.6
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.5e-40 169.1 124 76.6
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 2.1e-39 166.0 91 90.1
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.6e-39 165.2 115 77.4
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.5e-37 159.8 140 62.9
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 4.4e-37 158.3 112 79.5
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 5.7e-37 157.9 121 72.7
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 5.4e-35 151.4 132 63.6
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 7.0e-35 151.0 98 83.7
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 6.6e-33 144.4 141 56.7
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 5.6e-32 141.4 102 73.5
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 7.3e-32 141.0 110 68.2
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 2.3e-30 136.0 140 58.6
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 8.9e-30 134.0 118 61.9
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 9.8e-29 130.6 131 59.5
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.4e-27 126.7 119 63.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.4e-27 126.7 119 63.0
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.2e-27 125.6 105 72.4
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 9.2e-27 124.0 98 72.4
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.6e-26 121.7 145 54.5
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 1.3e-25 120.2 69 81.2
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 8.6e-25 117.5 64 87.5
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 2.5e-24 115.9 132 53.8
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 3.3e-24 115.5 132 51.5
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 2.0e-21 106.3 82 69.5
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 7.5e-21 104.4 87 65.5
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-20 103.6 77 71.4
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 2.2e-20 102.8 76 72.4
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 7.8e-18 94.4 47 89.4
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 6.6e-17 91.3 81 63.0
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 8.6e-17 90.9 75 66.7
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 5.1e-09 65.1 35 91.4


User provided reference genes

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