Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.1e-122 442.2 290 100.0
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.5e-60 237.3 123 90.2
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-56 224.2 130 81.5
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 7.5e-52 208.4 119 80.7
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.5e-52 208.4 119 80.7
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-51 207.6 119 79.8
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 3.3e-39 166.4 118 66.1
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.0e-17 92.4 110 43.6
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.8e-17 92.0 144 38.9
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 7.8e-17 92.0 141 40.4
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 2.3e-16 90.5 146 38.4
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 6.6e-16 89.0 139 38.1
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.9e-15 87.4 144 38.2
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 6.2e-14 82.4 123 35.8
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 8.1e-14 82.0 117 39.3
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 8.1e-14 82.0 127 37.8
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 1.8e-13 80.9 136 39.0
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 3.1e-13 80.1 139 34.5
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 5.3e-13 79.3 155 34.8
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 2.0e-12 77.4 119 35.3
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 2.6e-12 77.0 130 36.2
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 4.5e-12 76.3 148 31.8
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 7.6e-12 75.5 137 35.8
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 9.9e-12 75.1 125 36.8
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 1.3e-11 74.7 118 38.1
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 1.3e-11 74.7 135 34.8
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 3.8e-11 73.2 129 35.7
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 3.8e-11 73.2 133 35.3
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 4.9e-11 72.8 148 33.1
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 4.9e-11 72.8 133 32.3
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 6.4e-11 72.4 155 30.3
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 8.4e-11 72.0 135 34.1
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.1e-10 71.6 123 35.8
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.1e-10 71.6 135 33.3
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.4e-10 71.2 123 35.8
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.9e-10 70.9 137 31.4
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 1.9e-10 70.9 142 37.3
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 2.4e-10 70.5 139 30.9
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.4e-10 70.5 139 30.9
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 2.4e-10 70.5 138 34.8
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 3.2e-10 70.1 139 30.9
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 4.2e-10 69.7 111 35.1
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 5.4e-10 69.3 119 35.3
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 5.4e-10 69.3 141 31.9
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 7.1e-10 68.9 135 36.3
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 9.3e-10 68.6 142 33.1
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 1.2e-09 68.2 148 34.5
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.6e-09 67.8 122 32.0
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 2.7e-09 67.0 126 33.3
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 2.7e-09 67.0 122 32.8
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 4.6e-09 66.2 78 46.2
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 4.6e-09 66.2 124 35.5
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 6.0e-09 65.9 146 34.2
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 6.0e-09 65.9 108 33.3
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 7.9e-09 65.5 147 29.3
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 7.9e-09 65.5 128 36.7
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.0e-08 65.1 144 34.0
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 3.9e-08 63.2 143 32.2
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 3.9e-08 63.2 146 32.9
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.9e-08 63.2 107 38.3
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 5.1e-08 62.8 130 30.0
FvH4_2g17920 Fragaria vesca HOM05D002214 ORTHO05D045595 6.7e-08 62.4 79 44.3
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.1e-07 61.6 134 34.3
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.9e-07 60.8 125 33.6
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.9e-07 60.8 125 33.6
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 1.9e-07 60.8 119 34.5
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 2.5e-07 60.5 108 37.0
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 4.3e-07 59.7 125 34.4
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 7.4e-07 58.9 110 32.7
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 1.3e-06 58.2 102 36.3
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.6e-06 57.8 114 32.5
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 2.1e-06 57.4 107 37.4
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 2.8e-06 57.0 104 32.7
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 2.8e-06 57.0 104 32.7
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.8e-06 57.0 126 34.1
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 3.7e-06 56.6 141 31.2


User provided reference genes

Program Settings