Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.1e-30 136.0 66 100.0
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 5.9e-29 130.2 65 96.9
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 2.5e-27 124.8 61 98.4
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.5e-27 124.8 61 98.4
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.5e-27 124.8 61 98.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.2e-27 124.4 61 96.7
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 5.5e-27 123.6 65 90.8
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 5.5e-27 123.6 63 93.7
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 7.2e-27 123.2 61 95.1
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 7.2e-27 123.2 61 96.7
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 7.2e-27 123.2 61 95.1
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 2.1e-26 121.7 61 96.7
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 2.1e-26 121.7 61 96.7
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 3.6e-26 120.9 63 92.1
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 3.6e-26 120.9 63 92.1
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 3.6e-26 120.9 60 96.7
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 4.7e-26 120.6 61 95.1
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 4.7e-26 120.6 61 95.1
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 6.1e-26 120.2 61 95.1
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 8.0e-26 119.8 60 96.7
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 8.0e-26 119.8 61 95.1
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 8.0e-26 119.8 61 95.1
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 8.0e-26 119.8 61 95.1
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.0e-25 119.4 59 96.6
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.4e-25 119.0 57 100.0
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 1.4e-25 119.0 61 91.8
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.4e-25 119.0 61 91.8
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.4e-25 119.0 61 91.8
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.4e-25 119.0 61 91.8
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.4e-25 119.0 61 91.8
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.4e-25 119.0 61 91.8
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 1.4e-25 119.0 61 91.8
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.4e-25 119.0 58 98.3
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.8e-25 118.6 61 91.8
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.8e-25 118.6 61 91.8
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 1.8e-25 118.6 61 91.8
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 1.8e-25 118.6 61 91.8
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.8e-25 118.6 58 96.6
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.8e-25 118.6 58 96.6
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.8e-25 118.6 61 91.8
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.8e-25 118.6 58 96.6
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.8e-25 118.6 58 96.6
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.8e-25 118.6 58 96.6
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 2.3e-25 118.2 60 95.0
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 2.3e-25 118.2 61 91.8
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 2.3e-25 118.2 61 91.8
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 2.3e-25 118.2 60 93.3
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 3.0e-25 117.9 58 96.6
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 3.0e-25 117.9 61 91.8
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 3.0e-25 117.9 58 96.6
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 3.0e-25 117.9 58 96.6
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 3.0e-25 117.9 58 96.6
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 4.0e-25 117.5 58 96.6
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 4.0e-25 117.5 58 96.6
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 4.0e-25 117.5 58 94.8
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 4.0e-25 117.5 58 94.8
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 4.0e-25 117.5 58 96.6
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 4.0e-25 117.5 61 91.8
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 5.2e-25 117.1 60 95.0
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 5.2e-25 117.1 58 94.8
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 5.2e-25 117.1 58 96.6
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.2e-25 117.1 58 96.6
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 5.2e-25 117.1 58 96.6
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 5.2e-25 117.1 61 90.2
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 6.8e-25 116.7 61 91.8
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 6.8e-25 116.7 58 96.6
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 6.8e-25 116.7 59 96.6
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 6.8e-25 116.7 58 96.6
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 6.8e-25 116.7 61 91.8
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 1.2e-24 115.9 57 98.2
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 1.5e-24 115.5 58 94.8
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 2.6e-24 114.8 61 90.2
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 3.4e-24 114.4 58 93.1
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 4.4e-24 114.0 58 91.4
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 4.4e-24 114.0 62 90.3
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 4.4e-24 114.0 70 82.9
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 9.8e-24 112.8 58 93.1
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.2e-23 111.7 55 98.2
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 2.8e-23 111.3 58 93.1
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 3.7e-23 110.9 59 91.5
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 6.3e-23 110.2 57 93.0
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 2.3e-20 101.7 52 96.2
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 3.8e-20 100.9 61 80.3
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 6.6e-20 100.1 51 94.1
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 6.6e-20 100.1 52 88.5
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 8.6e-20 99.8 53 92.5
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 8.6e-20 99.8 53 92.5
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 1.9e-19 98.6 57 86.0
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 7.2e-19 96.7 58 77.6
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 3.6e-18 94.4 59 78.0
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 3.6e-18 94.4 58 75.9
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 1.0e-17 92.8 59 74.6
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.8e-17 92.0 44 95.5
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.8e-17 92.0 59 78.0
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 3.0e-17 91.3 59 78.0
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.4e-14 82.4 47 80.9
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 2.4e-14 81.6 46 80.4
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 5.9e-13 77.0 52 71.2
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 1.0e-12 76.3 42 76.2
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 1.0e-12 76.3 36 94.4
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 2.3e-12 75.1 35 94.3
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.9e-12 74.7 36 91.7
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 2.5e-11 71.6 34 94.1
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 6.8e-09 63.5 32 93.8
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 2.9e-07 58.2 31 93.5
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.4e-06 55.1 27 100.0


User provided reference genes

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