Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 9.9e-222 773.1 376 100.0
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 6.5e-189 664.1 388 88.1
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.3e-184 649.8 388 86.1
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.4e-182 641.7 393 85.0
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.7e-181 639.4 388 85.1
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 7.2e-172 607.4 368 85.1
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 4.5e-166 588.2 391 78.0
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 1.9e-140 503.1 393 68.4
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 1.7e-128 463.4 394 62.2
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.6e-126 456.8 388 60.8
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 2.7e-126 456.1 395 61.0
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 6.0e-126 454.9 395 61.5
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 4.3e-124 448.7 398 59.5
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 4.3e-124 448.7 389 61.4
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 1.2e-123 447.2 398 59.8
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 4.7e-123 445.3 399 58.9
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 1.4e-122 443.7 393 59.5
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 3.1e-122 442.6 393 59.3
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 5.2e-122 441.8 355 63.7
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 5.2e-122 441.8 390 59.7
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 6.8e-122 441.4 393 61.1
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.2e-121 440.7 393 59.3
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.2e-121 440.7 386 59.1
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 2.0e-121 439.9 401 56.6
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.0e-121 439.9 386 59.1
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 5.8e-121 438.3 394 59.9
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 2.9e-120 436.0 397 58.2
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 4.9e-120 435.3 392 59.4
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 1.1e-119 434.1 382 59.7
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.2e-119 432.6 376 58.8
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.2e-119 432.6 376 58.8
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 5.4e-119 431.8 357 60.5
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 1.6e-118 430.3 374 60.2
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 2.7e-118 429.5 362 60.8
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 3.5e-118 429.1 397 58.4
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 6.0e-118 428.3 375 59.5
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 7.8e-118 427.9 384 57.6
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 1.0e-117 427.6 397 58.9
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 8.6e-117 424.5 395 57.7
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 3.6e-115 419.1 395 57.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 4.7e-115 418.7 396 58.6
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 4.0e-114 415.6 378 57.7
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 3.4e-113 412.5 378 56.9
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 9.9e-113 411.0 359 58.8
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 1.7e-112 410.2 347 60.5
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 2.9e-112 409.5 393 55.2
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 3.8e-112 409.1 380 56.8
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 5.4e-111 405.2 386 56.2
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 5.4e-111 405.2 403 54.1
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 7.1e-111 404.8 354 59.6
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.6e-110 403.7 361 59.8
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 7.8e-110 401.4 358 58.4
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.3e-109 399.8 396 55.3
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 2.5e-108 396.4 383 56.9
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 7.3e-108 394.8 379 55.9
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 7.3e-108 394.8 381 56.2
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 9.6e-108 394.4 404 54.0
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.6e-107 393.7 447 50.1
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 1.6e-107 393.7 348 58.6
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 3.6e-107 392.5 380 55.0
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 6.2e-107 391.7 362 58.3
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.1e-106 391.0 399 53.1
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 1.4e-106 390.6 391 54.5
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 3.1e-106 389.4 364 57.1
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 3.1e-106 389.4 393 54.2
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 3.1e-106 389.4 344 58.1
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 6.9e-106 388.3 393 54.5
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 6.9e-106 388.3 392 52.8
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 6.9e-106 388.3 396 55.1
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 9.0e-106 387.9 391 55.0
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 2.6e-105 386.3 348 56.6
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 7.6e-105 384.8 384 54.4
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 3.8e-104 382.5 350 56.9
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 2.4e-103 379.8 390 52.8
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 5.4e-103 378.6 353 55.2
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 9.3e-103 377.9 366 53.8
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 9.3e-103 377.9 346 56.1
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 7.9e-102 374.8 337 58.5
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 3.9e-101 372.5 385 53.0
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 3.9e-101 372.5 352 53.7
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 1.1e-100 370.9 393 53.2
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 1.9e-100 370.2 410 52.2
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 3.3e-100 369.4 372 53.2
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 5.6e-100 368.6 391 52.4
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 2.1e-99 366.7 333 59.5
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 1.8e-98 363.6 371 55.3
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 2.4e-98 363.2 309 61.2
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 1.5e-97 360.5 363 55.6
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 3.4e-97 359.4 329 59.0
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 9.9e-97 357.8 342 53.5
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.3e-96 357.5 342 53.5
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.7e-96 357.1 375 50.7
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 1.7e-96 357.1 366 53.6
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 6.4e-96 355.1 375 52.8
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.0e-93 347.8 308 59.7
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 3.0e-93 346.3 303 60.4
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 8.7e-93 344.7 308 57.8
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 1.3e-91 340.9 372 52.2
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 1.3e-91 340.9 401 50.1
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 3.7e-91 339.3 381 50.9
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 4.0e-90 335.9 350 53.7
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 1.5e-89 334.0 393 49.9
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 1.7e-88 330.5 352 52.6
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 5.7e-84 315.5 284 63.4
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 1.6e-78 297.4 346 50.0
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 4.6e-78 295.8 328 49.4
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 8.7e-77 291.6 334 47.0
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 1.5e-73 280.8 322 49.1
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 4.2e-71 272.7 374 42.8
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 9.4e-71 271.6 315 46.0
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 3.6e-70 269.6 314 47.1
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 6.1e-62 242.3 325 42.5
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 5.0e-56 222.6 236 50.8
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 8.0e-54 215.3 281 46.3
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.1e-50 204.9 323 37.5
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.4e-50 204.5 312 39.7
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 3.5e-49 199.9 129 72.9
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.3e-48 198.0 316 34.8
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 5.0e-48 196.1 294 42.2
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 1.2e-44 184.9 322 36.6
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 2.7e-38 163.7 146 56.2
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 6.6e-32 142.5 89 73.0
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 3.6e-30 136.7 85 75.3
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.5e-20 104.8 228 32.9
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 1.4e-10 71.6 42 69.0
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.9e-10 71.2 83 41.0
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 1.3e-08 65.1 101 40.6
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.5e-07 60.8 63 57.1
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 9.5e-07 58.9 69 43.5


User provided reference genes

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