Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2889 Fragaria x ananassa HOM05D003257 ORTHO05D003749 4.5e-77 291.2 148 100.0
FAN26G2639 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.5e-69 266.2 132 99.2
FvH4_1g08980 Fragaria vesca HOM05D003257 ORTHO05D003749 3.6e-34 148.7 75 94.7
FAN19G0462 Fragaria x ananassa HOM05D003257 ORTHO05D003749 3.6e-34 148.7 75 94.7
MELO3C020408.2 Cucumis melo HOM05D003257 ORTHO05D003749 4.9e-31 138.3 110 67.3
CsaV3_2G011840 Cucumis sativus L. HOM05D003257 ORTHO05D003749 6.4e-31 137.9 110 67.3
Sed0024427 Sechium edule HOM05D003257 ORTHO05D003749 1.1e-30 137.1 110 66.4
RcHm_v2.0_Chr2g0084261 Rosa chinensis HOM05D003257 ORTHO05D003749 1.4e-30 136.7 73 91.8
Sed0018493 Sechium edule HOM05D003257 ORTHO05D003749 3.2e-30 135.6 73 90.4
FvH4_1g00040 Fragaria vesca HOM05D003257 ORTHO05D003749 4.1e-30 135.2 73 90.4
FAN23G0512 Fragaria x ananassa HOM05D003257 ORTHO05D003749 4.1e-30 135.2 73 90.4
FAN26G0496 Fragaria x ananassa HOM05D003257 ORTHO05D003749 4.1e-30 135.2 73 90.4
FAN28G1981 Fragaria x ananassa HOM05D003257 ORTHO05D003749 4.1e-30 135.2 73 90.4
Prupe.7G271500 Prunus persica HOM05D003257 ORTHO05D003749 4.1e-30 135.2 73 90.4
Manes.01G008800 Manihot esculenta HOM05D003257 ORTHO05D003749 5.4e-30 134.8 110 63.6
MD02G1001200 Malus domestica HOM05D003257 ORTHO05D003749 7.0e-30 134.4 73 90.4
arahy.Tifrunner.gnm1.ann1.BPEV7T Arachis hypogaea HOM05D003257 ORTHO05D003749 9.2e-30 134.0 110 64.5
arahy.Tifrunner.gnm1.ann1.ZYH4BX Arachis hypogaea HOM05D003257 ORTHO05D003749 9.2e-30 134.0 110 64.5
QL10p065198 Quercus lobata HOM05D003257 ORTHO05D003749 9.2e-30 134.0 110 65.5
Cfa008541 Carpinus fangiana HOM05D003257 ORTHO05D003749 1.2e-29 133.7 110 65.5
Haze_11091 Corylus avellana HOM05D003257 ORTHO05D003749 1.2e-29 133.7 110 65.5
Gohir.A09G206300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.2e-29 133.7 73 87.7
Gohir.D09G199900 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.2e-29 133.7 73 87.7
Gorai.006G223600 Gossypium raimondii HOM05D003257 ORTHO05D003749 1.2e-29 133.7 73 87.7
TAR633G0285 Trochodendron aralioides HOM05D003257 ORTHO05D003749 1.2e-29 133.7 110 64.5
vmacro00737 Vaccinium macrocarpon HOM05D003257 ORTHO05D003749 1.2e-29 133.7 73 87.7
Duzib151G0199 Durio zibethinus HOM05D003257 ORTHO05D003749 1.6e-29 133.3 73 87.7
Duzib268G1600 Durio zibethinus HOM05D003257 ORTHO05D003749 1.6e-29 133.3 73 87.7
Gohir.A10G127700 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.6e-29 133.3 73 87.7
Gohir.D10G138300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.6e-29 133.3 73 87.7
Gorai.011G153400 Gossypium raimondii HOM05D003257 ORTHO05D003749 1.6e-29 133.3 73 87.7
MD15G1141700 Malus domestica HOM05D003257 ORTHO05D003749 1.6e-29 133.3 73 89.0
Thecc.04G195400 Theobroma cacao HOM05D003257 ORTHO05D003749 1.6e-29 133.3 73 87.7
Ciclev10019406m.g Citrus clementina HOM05D003257 ORTHO05D003749 2.7e-29 132.5 73 87.7
Potri.007G147300 Populus trichocarpa HOM05D003257 ORTHO05D003749 2.7e-29 132.5 110 63.6
TWI15G1037 Tripterygium wilfordii HOM05D003257 ORTHO05D003749 2.7e-29 132.5 110 64.5
COL.COLO4_20225 Corchorus olitorius HOM05D003257 ORTHO05D003749 3.5e-29 132.1 73 86.3
Duzib212G0020 Durio zibethinus HOM05D003257 ORTHO05D003749 3.5e-29 132.1 73 86.3
Lalb_Chr03g0037991 Lupinus albus HOM05D003257 ORTHO05D003749 3.5e-29 132.1 110 62.7
MD00G1145100 Malus domestica HOM05D003257 ORTHO05D003749 3.5e-29 132.1 73 89.0
CDE06G0339 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 4.6e-29 131.7 110 63.6
Potri.017G000300 Populus trichocarpa HOM05D003257 ORTHO05D003749 4.6e-29 131.7 110 62.7
PGR042G2645 Punica granatum HOM05D003257 ORTHO05D003749 6.0e-29 131.3 73 87.7
Ca_26297_v3 Cicer arietinum L. HOM05D003257 ORTHO05D003749 7.8e-29 131.0 73 84.9
Medtr1g040105 Medicago truncatula HOM05D003257 ORTHO05D003749 7.8e-29 131.0 73 84.9
TPR.G30222 Trifolium pratense HOM05D003257 ORTHO05D003749 7.8e-29 131.0 73 84.9
Actinidia18382 Actinidia chinensis HOM05D003257 ORTHO05D003749 1.0e-28 130.6 73 83.6
Cpa.g.sc9.233 Carica papaya HOM05D003257 ORTHO05D003749 1.0e-28 130.6 73 86.3
COL.COLO4_34333 Corchorus olitorius HOM05D003257 ORTHO05D003749 1.0e-28 130.6 73 84.9
MBI15_g33460_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 1.0e-28 130.6 73 84.9
Nn1g09394 Nelumbo nucifera HOM05D003257 ORTHO05D003749 1.0e-28 130.6 73 84.9
Aqoxy2G00629 Aquilegia oxysepala HOM05D003257 ORTHO05D003749 1.3e-28 130.2 73 84.9
DCAR_027487 Daucus carota HOM05D003257 ORTHO05D003749 1.3e-28 130.2 73 84.9
Lalb_Chr01g0020651 Lupinus albus HOM05D003257 ORTHO05D003749 1.3e-28 130.2 110 61.8
Psat6g101800 Pisum sativum HOM05D003257 ORTHO05D003749 1.3e-28 130.2 73 84.9
SalBow6G1509 Salvia bowleyana HOM05D003257 ORTHO05D003749 1.3e-28 130.2 110 61.8
SGA_v2.0_scaffold19G08917 Striga asiatica HOM05D003257 ORTHO05D003749 1.3e-28 130.2 110 61.8
CANSAT56G2399 Cannabis sativa HOM05D003257 ORTHO05D003749 1.7e-28 129.8 73 84.9
CDE07G1142 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 2.3e-28 129.4 110 62.7
Glyma.04G256100 Glycine max HOM05D003257 ORTHO05D003749 2.3e-28 129.4 110 60.9
Nitab4.5_0000971g0090 Nicotiana tabacum HOM05D003257 ORTHO05D003749 2.3e-28 129.4 73 82.2
Nitab4.5_0003263g0060 Nicotiana tabacum HOM05D003257 ORTHO05D003749 2.3e-28 129.4 73 82.2
CiPaw.01G204000 Carya illinoinensis HOM05D003257 ORTHO05D003749 3.0e-28 129.0 73 83.6
Eucgr.A00394 Eucalyptus grandis HOM05D003257 ORTHO05D003749 3.0e-28 129.0 73 83.6
GSVIVG01019374001 Vitis vinifera HOM05D003257 ORTHO05D003749 3.0e-28 129.0 73 84.9
Atru.chr3.2621 Acer truncatum HOM05D003257 ORTHO05D003749 3.9e-28 128.6 73 83.6
Lju124A8T11 Lonicera japonica HOM05D003257 ORTHO05D003749 3.9e-28 128.6 73 83.6
ATR0053G017 Amborella trichopoda HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 83.6
MSTRG.24536 Avicennia marina HOM05D003257 ORTHO05D003749 5.0e-28 128.3 146 50.0
DCAR_005464 Daucus carota HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 82.2
Phvul.007G281200 Phaseolus vulgaris HOM05D003257 ORTHO05D003749 5.0e-28 128.3 110 60.0
Rhsim09G0000900 Rhododendron simsii HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 83.6
Sc25g0002280 Simmondsia chinensis HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 82.2
Solyc05g055730.4 Solanum lycopersicum HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 80.8
Sopen05g034140 Solanum pennellii HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 80.8
PGSC0003DMG400023361 Solanum tuberosum HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 80.8
Zm00001eb062180 Zea mays HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 82.2
Zm00001eb440700 Zea mays HOM05D003257 ORTHO05D003749 5.0e-28 128.3 73 82.2
Dinv24735 Davidia involucrata HOM05D003257 ORTHO05D003749 6.6e-28 127.9 73 82.2
TAR362G0403 Trochodendron aralioides HOM05D003257 ORTHO05D003749 6.6e-28 127.9 73 83.6
VMungo0647G2577 Vigna mungo HOM05D003257 ORTHO05D003749 6.6e-28 127.9 73 82.2
CANSAT54G2167 Cannabis sativa HOM05D003257 ORTHO05D003749 8.6e-28 127.5 73 83.6
CAN.G694.27 Capsicum annuum HOM05D003257 ORTHO05D003749 8.6e-28 127.5 73 80.8
Glyma.06G325300 Glycine max HOM05D003257 ORTHO05D003749 8.6e-28 127.5 73 82.2
Nitab4.5_0006595g0030 Nicotiana tabacum HOM05D003257 ORTHO05D003749 8.6e-28 127.5 73 82.2
Peaxi162Scf00344g00056 Petunia axillaris HOM05D003257 ORTHO05D003749 8.6e-28 127.5 73 82.2
CiPaw.02G126200 Carya illinoinensis HOM05D003257 ORTHO05D003749 1.1e-27 127.1 73 83.6
Nn7g37414 Nelumbo nucifera HOM05D003257 ORTHO05D003749 1.1e-27 127.1 110 60.0
SEGI_28465 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 1.1e-27 127.1 110 60.9
unitig_27.g25139 Utricularia gibba HOM05D003257 ORTHO05D003749 1.1e-27 127.1 73 82.2
Ah.07g203400 Amaranthus hybridus HOM05D003257 ORTHO05D003749 1.5e-27 126.7 110 59.1
Migut.N03006 Erythranthe guttata HOM05D003257 ORTHO05D003749 1.5e-27 126.7 110 59.1
Lj3g0005174 Lotus japonicus HOM05D003257 ORTHO05D003749 1.5e-27 126.7 73 82.2
Sabra17G0005200 Salix brachista HOM05D003257 ORTHO05D003749 1.5e-27 126.7 73 83.6
Hund22666 Selenicereus undatus HOM05D003257 ORTHO05D003749 1.5e-27 126.7 73 82.2
PGSC0003DMG400016168 Solanum tuberosum HOM05D003257 ORTHO05D003749 1.5e-27 126.7 73 80.8
SGA_v2.0_scaffold25G11024 Striga asiatica HOM05D003257 ORTHO05D003749 1.5e-27 126.7 110 60.0
AagrBONN_evm.TU.Sc2ySwM_117.3164 Anthoceros agrestis HOM05D003257 ORTHO05D003749 1.9e-27 126.3 71 80.3
Nitab4.5_0001653g0120 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.9e-27 126.3 73 80.8
Nitab4.5_0006595g0040 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.9e-27 126.3 73 80.8
AUR62002512 Chenopodium quinoa HOM05D003257 ORTHO05D003749 2.5e-27 125.9 73 80.8
AUR62023682 Chenopodium quinoa HOM05D003257 ORTHO05D003749 2.5e-27 125.9 73 80.8
EL10Ac3g06195 Beta vulgaris HOM05D003257 ORTHO05D003749 3.3e-27 125.6 73 80.8
CSS0014401 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 3.3e-27 125.6 73 79.5
CSS0029511 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 3.3e-27 125.6 73 79.5
THA.LOC104804412 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 3.3e-27 125.6 73 80.8
CSS0030539 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 4.3e-27 125.2 73 79.5
Mapoly0107s0040 Marchantia polymorpha HOM05D003257 ORTHO05D003749 5.6e-27 124.8 110 57.3
Solyc11g008870.2 Solanum lycopersicum HOM05D003257 ORTHO05D003749 5.6e-27 124.8 73 79.5
Sopen11g004650 Solanum pennellii HOM05D003257 ORTHO05D003749 5.6e-27 124.8 73 79.5
THA.LOC104802525 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 7.3e-27 124.4 73 79.5
AagrBONN_evm.TU.Sc2ySwM_344.1685 Anthoceros agrestis HOM05D003257 ORTHO05D003749 9.5e-27 124.0 108 58.3
Lsat_1_v5_gn_7_3921 Lactuca sativa HOM05D003257 ORTHO05D003749 1.2e-26 123.6 73 79.5
Peaxi162Scf00156g00015 Petunia axillaris HOM05D003257 ORTHO05D003749 1.2e-26 123.6 73 80.8
Oeu028194.1 Olea europaea HOM05D003257 ORTHO05D003749 1.6e-26 123.2 110 58.2
Thhalv10001367m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 2.8e-26 122.5 110 57.3
Os03g0815200 Oryza sativa ssp. japonica HOM05D003257 ORTHO05D003749 2.8e-26 122.5 73 80.8
Sc19g0002470 Simmondsia chinensis HOM05D003257 ORTHO05D003749 2.8e-26 122.5 73 78.1
AagrBONN_evm.TU.Sc2ySwM_344.3446 Anthoceros agrestis HOM05D003257 ORTHO05D003749 3.6e-26 122.1 73 79.5
ECA236G5120 Erigeron canadensis HOM05D003257 ORTHO05D003749 3.6e-26 122.1 73 78.1
HanXRQChr04g0120771 Helianthus annuus HOM05D003257 ORTHO05D003749 3.6e-26 122.1 73 78.1
A05p04270 Brassica napus HOM05D003257 ORTHO05D003749 6.2e-26 121.3 73 76.7
C04p05050 Brassica napus HOM05D003257 ORTHO05D003749 6.2e-26 121.3 73 76.7
BolC4t22138H Brassica oleracea HOM05D003257 ORTHO05D003749 6.2e-26 121.3 73 76.7
BraA05t19412Z Brassica rapa HOM05D003257 ORTHO05D003749 6.2e-26 121.3 73 76.7
CARHR139330 Cardamine hirsuta HOM05D003257 ORTHO05D003749 6.2e-26 121.3 110 56.4
MBI15_g33461_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 6.2e-26 121.3 73 78.1
PSO339G3074 Papaver somniferum HOM05D003257 ORTHO05D003749 6.2e-26 121.3 73 79.5
PSO384G1169 Papaver somniferum HOM05D003257 ORTHO05D003749 6.2e-26 121.3 73 79.5
Aa31LG10G14190 Aethionema arabicum HOM05D003257 ORTHO05D003749 8.0e-26 120.9 73 76.7
Aa31LG1G25830 Aethionema arabicum HOM05D003257 ORTHO05D003749 8.0e-26 120.9 110 55.5
AL4G43040 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 8.0e-26 120.9 73 76.7
AT2G44160 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 8.0e-26 120.9 73 76.7
BcaB01g03327 Brassica carinata HOM05D003257 ORTHO05D003749 8.0e-26 120.9 73 76.7
Carub.0004s2671 Capsella rubella HOM05D003257 ORTHO05D003749 8.0e-26 120.9 73 76.7
HanXRQChr06g0170341 Helianthus annuus HOM05D003257 ORTHO05D003749 8.0e-26 120.9 73 76.7
Lj6g0016848 Lotus japonicus HOM05D003257 ORTHO05D003749 8.0e-26 120.9 110 59.1
Sp4g26240 Schrenkiella parvula HOM05D003257 ORTHO05D003749 8.0e-26 120.9 73 76.7
BcaB06g29359 Brassica carinata HOM05D003257 ORTHO05D003749 1.8e-25 119.8 73 75.3
BcaB06g29361 Brassica carinata HOM05D003257 ORTHO05D003749 1.8e-25 119.8 73 75.3
A04p33220 Brassica napus HOM05D003257 ORTHO05D003749 1.8e-25 119.8 73 75.3
A07p24920 Brassica napus HOM05D003257 ORTHO05D003749 1.8e-25 119.8 110 55.5
C04p70910 Brassica napus HOM05D003257 ORTHO05D003749 1.8e-25 119.8 73 75.3
BraA04t18781Z Brassica rapa HOM05D003257 ORTHO05D003749 1.8e-25 119.8 73 75.3
FAN23G0954 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.8e-25 119.8 58 96.6
C08p34970 Brassica napus HOM05D003257 ORTHO05D003749 2.3e-25 119.4 110 55.5
Thhalv10005854m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 2.3e-25 119.4 110 55.5
Sp5g03210 Schrenkiella parvula HOM05D003257 ORTHO05D003749 2.3e-25 119.4 110 55.5
AL5G42150 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 54.5
AT3G59970 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 54.5
BcaB02g07437 Brassica carinata HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 55.5
BcaC07g40537 Brassica carinata HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 55.5
BcaC08g45017 Brassica carinata HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 55.5
C06p26490 Brassica napus HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 55.5
BolC6t37812H Brassica oleracea HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 55.5
BolC8t51101H Brassica oleracea HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 55.5
BraA07t30134Z Brassica rapa HOM05D003257 ORTHO05D003749 3.1e-25 119.0 110 55.5
Carub.0005s2670 Capsella rubella HOM05D003257 ORTHO05D003749 3.1e-25 119.0 73 75.3
SalBow3G3990 Salvia bowleyana HOM05D003257 ORTHO05D003749 3.1e-25 119.0 73 76.7
BcaC07g40402 Brassica carinata HOM05D003257 ORTHO05D003749 4.0e-25 118.6 110 54.5
A09p52310 Brassica napus HOM05D003257 ORTHO05D003749 4.0e-25 118.6 73 75.3
BraA09t40660Z Brassica rapa HOM05D003257 ORTHO05D003749 4.0e-25 118.6 73 75.3
CARHR170290 Cardamine hirsuta HOM05D003257 ORTHO05D003749 4.0e-25 118.6 73 74.0
SGA_v2.0_scaffold12G06250 Striga asiatica HOM05D003257 ORTHO05D003749 4.0e-25 118.6 73 76.7
AUR62002511 Chenopodium quinoa HOM05D003257 ORTHO05D003749 6.8e-25 117.9 71 71.8
SMO367G0955 Selaginella moellendorffii HOM05D003257 ORTHO05D003749 1.2e-24 117.1 73 74.0
CAN.G1177.14 Capsicum annuum HOM05D003257 ORTHO05D003749 3.4e-24 115.5 73 74.0
Phvul.006G222101 Phaseolus vulgaris HOM05D003257 ORTHO05D003749 1.3e-23 113.6 73 75.3
Pp3c10_24030 Physcomitrium patens HOM05D003257 ORTHO05D003749 1.3e-23 113.6 110 54.5
Pp3c24_960 Physcomitrium patens HOM05D003257 ORTHO05D003749 6.4e-23 111.3 73 72.6
AUR62004352 Chenopodium quinoa HOM05D003257 ORTHO05D003749 3.2e-22 109.0 71 70.4
AUR62022557 Chenopodium quinoa HOM05D003257 ORTHO05D003749 4.1e-22 108.6 71 73.2
Cre10.g433600 Chlamydomonas reinhardtii HOM05D003257 ORTHO05D003749 1.6e-21 106.7 73 68.5
CBR_g37215 Chara braunii HOM05D003257 ORTHO05D003749 1.0e-20 104.0 110 50.0
PRCOL_00004214 Prasinoderma coloniale HOM05D003257 ORTHO05D003749 8.6e-20 100.9 73 65.8
Eucgr.A00395 Eucalyptus grandis HOM05D003257 ORTHO05D003749 3.3e-19 99.0 74 62.2
Hma1.2p1_1372F.1_g278690 Hydrangea macrophylla HOM05D003257 ORTHO05D003749 5.6e-19 98.2 56 80.4
MBI05_g03438_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 3.6e-18 95.5 73 57.5
SMO200G0039 Selaginella moellendorffii HOM05D003257 ORTHO05D003749 3.7e-15 85.5 71 52.1
Lj2A826G20 Lonicera japonica HOM05D003257 ORTHO05D003749 1.4e-14 83.6 44 88.6
Hund12292 Selenicereus undatus HOM05D003257 ORTHO05D003749 4.1e-14 82.0 96 51.0
AagrBONN_evm.TU.Sc2ySwM_344.1519 Anthoceros agrestis HOM05D003257 ORTHO05D003749 3.5e-13 79.0 71 56.3
Zm00001eb212100 Zea mays HOM05D003257 ORTHO05D003749 1.3e-12 77.0 40 85.0
Cfa021656 Carpinus fangiana HOM05D003257 ORTHO05D003749 6.8e-09 64.7 68 48.5
HPP92_007574 Vanilla planifolia HOM05D003257 ORTHO05D003749 2.4e-06 56.2 33 78.8


User provided reference genes

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