Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.8e-171 605.1 297 100.0
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 6.4e-131 471.1 323 76.5
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 8.3e-131 470.7 343 73.8
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.5e-124 449.9 323 74.0
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.1e-122 443.7 325 73.2
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 4.0e-117 425.2 323 69.3
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 4.3e-103 378.6 324 62.0
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 1.6e-102 376.7 287 66.2
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 4.9e-99 365.2 321 59.2
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 5.3e-93 345.1 321 55.8
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 9.0e-93 344.4 321 54.8
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 9.0e-93 344.4 315 56.8
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.8e-92 341.7 299 58.2
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 3.2e-90 335.9 328 54.9
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 4.2e-90 335.5 324 53.4
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 6.0e-89 331.6 323 53.9
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 7.4e-87 324.7 323 52.6
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 7.4e-87 324.7 319 53.9
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 6.2e-86 321.6 321 51.7
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.8e-85 320.1 320 51.2
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.8e-85 320.1 323 52.9
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 2.6e-84 316.2 321 50.5
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 1.3e-83 313.9 315 51.1
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.7e-83 313.5 315 54.6
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 3.8e-83 312.4 316 52.8
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.1e-82 310.8 316 52.5
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 1.1e-82 310.8 309 51.5
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 3.2e-82 309.3 330 47.9
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 3.2e-82 309.3 330 47.9
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 5.5e-82 308.5 331 49.2
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 3.5e-81 305.8 323 49.2
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 4.6e-81 305.4 319 48.3
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 2.3e-80 303.1 318 52.2
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 3.0e-80 302.8 323 48.9
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 5.1e-80 302.0 324 48.1
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.9e-79 300.1 323 48.6
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 7.4e-79 298.1 316 48.4
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 2.8e-78 296.2 320 49.1
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.4e-77 293.9 326 47.9
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 9.0e-77 291.2 316 48.1
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 5.8e-76 288.5 319 46.4
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.7e-75 287.0 315 47.3
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 4.2e-74 282.3 323 46.7
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 1.6e-73 280.4 321 46.7
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 4.6e-73 278.9 308 45.8
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 6.0e-73 278.5 317 47.3
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 1.3e-72 277.3 327 45.6
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.5e-71 273.9 262 54.2
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 1.5e-71 273.9 267 51.7
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.2e-70 270.0 317 45.4
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 1.8e-69 266.9 305 45.9
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 3.1e-69 266.2 309 46.9
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 9.0e-69 264.6 268 52.2
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 2.0e-68 263.5 276 50.0
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 2.0e-68 263.5 304 47.4
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 7.2e-66 255.0 266 50.4
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 8.8e-64 248.1 271 45.8
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 1.1e-61 241.1 309 43.0
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.8e-61 240.4 287 46.0
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 4.1e-61 239.2 310 39.4
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 3.4e-60 236.1 308 42.2
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 5.0e-59 232.3 311 43.1
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 3.2e-58 229.6 344 38.7
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 6.7e-56 221.9 210 52.4
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 2.4e-53 213.4 222 49.5
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 2.0e-52 210.3 318 37.1
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 7.7e-52 208.4 140 74.3
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 2.2e-51 206.8 222 48.6
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 7.0e-45 185.3 246 41.5
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 9.1e-45 184.9 331 32.3
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 5.0e-43 179.1 211 45.0
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.1e-42 177.9 300 33.7
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 3.0e-40 169.9 227 41.0
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 2.6e-39 166.8 189 45.5
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 2.2e-38 163.7 329 30.4
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 5.3e-37 159.1 140 61.4
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 2.8e-30 136.7 141 48.9
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.1e-21 108.2 140 42.1
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.8e-16 90.9 98 46.9
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 1.4e-13 81.3 400 22.0
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 2.5e-10 70.5 93 40.9
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 7.5e-07 58.9 97 36.1


User provided reference genes

Program Settings