Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.2e-250 866.7 467 100.0
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.6e-232 808.5 467 95.3
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.8e-217 759.2 467 89.7
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 1.5e-198 696.4 481 82.7
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 2.3e-188 662.5 464 82.3
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 7.6e-155 551.2 468 71.4
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 2.6e-147 526.2 455 68.6
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 1.0e-138 497.7 459 67.1
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 2.6e-131 473.0 467 63.8
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 4.6e-128 462.2 458 62.9
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.8e-127 460.3 462 62.6
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 2.2e-125 453.4 461 62.7
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 4.5e-123 445.7 459 61.7
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 4.5e-123 445.7 469 61.2
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 8.5e-122 441.4 461 61.2
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.1e-121 441.0 459 59.5
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 2.5e-121 439.9 450 62.7
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 3.9e-119 432.6 451 61.9
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 6.7e-119 431.8 462 61.7
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.1e-118 431.0 473 60.5
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.3e-117 427.6 448 62.3
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.8e-117 425.6 460 61.3
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 1.1e-116 424.5 469 58.6
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 3.1e-116 422.9 458 61.4
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 5.3e-116 422.2 473 59.6
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.2e-115 421.0 458 61.4
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.5e-115 420.6 464 58.4
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 3.5e-115 419.5 464 60.6
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 5.9e-115 418.7 458 57.9
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 2.9e-114 416.4 463 59.0
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 5.0e-114 415.6 451 60.5
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 5.0e-114 415.6 448 61.2
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 8.5e-114 414.8 468 59.2
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 1.9e-113 413.7 483 56.3
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 3.2e-113 412.9 449 61.2
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 9.4e-113 411.4 459 57.1
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.2e-112 411.0 493 57.0
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 2.7e-112 409.8 463 57.2
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 4.7e-112 409.1 508 54.3
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 8.0e-112 408.3 458 57.0
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.8e-111 407.1 471 58.2
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 3.0e-111 406.4 458 56.6
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 2.0e-110 403.7 461 58.1
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 2.0e-110 403.7 460 56.7
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 7.4e-110 401.7 457 59.1
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 1.7e-109 400.6 461 58.6
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 2.8e-109 399.8 453 57.6
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 8.2e-109 398.3 500 55.8
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.1e-108 397.9 457 55.8
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 4.1e-108 396.0 483 55.3
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 4.1e-108 396.0 458 59.4
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 5.3e-108 395.6 464 55.2
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.6e-107 394.0 457 57.1
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.0e-107 393.7 463 57.2
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 5.9e-107 392.1 459 58.2
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.3e-106 391.0 464 55.6
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.3e-106 391.0 459 58.0
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.7e-106 390.6 477 55.1
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.9e-106 389.8 497 54.7
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 2.5e-105 386.7 462 56.5
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 9.4e-105 384.8 466 56.7
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 2.7e-104 383.3 460 57.2
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 1.0e-103 381.3 475 50.1
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 6.8e-103 378.6 521 45.7
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 3.4e-102 376.3 461 56.2
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 1.6e-99 367.5 458 55.7
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.9e-98 363.2 458 55.2
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 6.5e-98 362.1 466 52.6
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 4.2e-97 359.4 477 53.5
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 1.6e-96 357.5 454 55.7
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 2.1e-96 357.1 459 54.2
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 3.4e-94 349.7 457 52.1
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 2.8e-93 346.7 456 54.4
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 6.3e-93 345.5 458 52.2
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 1.2e-91 341.3 466 53.2
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 1.3e-90 337.8 465 52.3
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 3.8e-90 336.3 462 51.3
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 5.0e-90 335.9 462 51.7
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 1.1e-89 334.7 462 51.5
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 7.2e-89 332.0 463 50.3
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 1.6e-88 330.9 464 52.2
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.8e-88 330.1 466 52.4
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 6.1e-88 328.9 466 50.6
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 2.3e-87 327.0 404 54.7
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 9.8e-86 321.6 455 50.8
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 1.3e-85 321.2 465 49.5
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 1.1e-84 318.2 463 50.1
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 4.6e-83 312.8 430 51.9
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 7.3e-81 305.4 455 50.1
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 4.0e-79 299.7 357 59.9
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.0e-78 297.4 532 44.0
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.0e-78 297.4 532 44.0
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.6e-78 297.0 551 45.4
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 7.5e-78 295.4 481 48.6
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.3e-74 284.6 548 42.3
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.8e-71 274.2 480 40.8
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.7e-51 207.2 255 50.2
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 8.4e-45 185.7 213 52.1
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 3.2e-44 183.7 254 47.2
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 6.0e-43 179.5 117 81.2
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.8e-39 167.9 264 40.2
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 6.4e-37 159.5 347 42.9
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 1.4e-36 158.3 223 46.2
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 7.9e-35 152.5 81 96.3
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 4.8e-32 143.3 110 72.7
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 6.2e-32 142.9 221 39.8
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.8e-31 141.4 180 47.2
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 2.4e-31 141.0 97 76.3
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 3.2e-28 130.6 155 50.3
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 1.1e-23 115.5 397 35.8
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 3.8e-21 107.1 173 42.2
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 3.8e-21 107.1 136 44.9
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 4.6e-19 100.1 151 45.7
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 2.3e-18 97.8 151 45.0
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 4.1e-15 87.0 162 40.7
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 9.0e-15 85.9 332 32.5
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.2e-14 85.5 99 49.5
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.2e-14 85.5 73 61.6
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 1.0e-13 82.4 167 44.3
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 9.7e-09 65.9 73 50.7
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 1.3e-08 65.5 50 68.0


User provided reference genes

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