Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 0.0e+00 1578.5 1142 100.0
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 0.0e+00 1402.5 1080 97.1
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 0.0e+00 1387.5 1066 97.7
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 0.0e+00 1385.9 1066 97.6
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 0.0e+00 1292.7 1066 89.8
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 0.0e+00 1142.9 1074 79.8
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 0.0e+00 1101.3 1074 78.2
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 2.0e-286 989.6 1087 72.9
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 1.1e-284 983.8 1071 73.3
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 2.9e-280 969.1 1096 71.7
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 6.4e-280 968.0 1071 77.1
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 1.2e-278 963.8 1071 70.2
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.6e-278 961.8 1070 75.9
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 6.0e-278 961.4 1070 72.1
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 7.8e-278 961.1 1134 69.1
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 1.1e-276 957.2 1096 70.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.9e-276 956.4 1093 71.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 5.6e-276 954.9 1074 71.2
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 5.6e-276 954.9 1074 71.2
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.8e-274 949.9 1091 71.0
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.7e-272 943.3 1071 71.0
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 2.2e-272 943.0 1072 69.3
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 2.2e-272 943.0 1096 70.2
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 8.3e-272 941.0 1115 71.7
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 4.1e-271 938.7 1096 70.0
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 7.1e-271 937.9 1072 71.6
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 9.2e-271 937.6 1074 69.1
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.5e-270 935.6 1096 69.9
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 3.5e-270 935.6 1092 70.9
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 3.0e-269 932.6 1075 69.4
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 3.0e-269 932.6 1093 71.1
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 1.5e-268 930.2 1070 71.2
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 2.5e-268 929.5 1072 71.3
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.6e-268 928.3 1072 69.3
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.2e-267 927.2 1087 70.2
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 3.6e-267 925.6 1067 70.9
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.8e-264 915.6 1067 76.0
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 5.4e-263 911.8 1093 68.5
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 9.2e-263 911.0 1070 69.5
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 1.6e-262 910.2 1070 67.8
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 1.6e-262 910.2 1077 69.4
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 2.7e-262 909.4 1071 69.9
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 3.5e-262 909.1 1069 68.7
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 7.8e-262 907.9 1075 68.0
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 3.0e-261 906.0 1094 69.1
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 3.3e-260 902.5 1069 70.3
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 2.1e-259 899.8 1066 70.7
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 4.7e-259 898.7 1070 68.7
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 6.2e-259 898.3 1066 71.2
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 1.2e-257 894.0 1066 68.2
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 1.2e-257 894.0 1080 69.9
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 2.9e-256 889.4 1090 56.8
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 6.4e-256 888.3 1089 66.6
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.2e-254 884.0 1074 69.2
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 5.1e-253 878.6 1065 68.3
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 6.2e-251 871.7 1076 67.9
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 6.2e-251 871.7 1070 68.0
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 1.4e-250 870.5 1067 66.7
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 3.0e-245 852.8 1077 65.4
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 5.6e-244 848.6 1094 65.2
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.8e-243 846.3 1075 66.9
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.1e-242 844.3 1063 67.4
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.4e-242 844.0 1077 66.5
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 2.6e-241 839.7 1065 66.5
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 3.4e-241 839.3 1078 63.7
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 7.6e-241 838.2 1077 66.3
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.1e-239 834.3 1076 67.5
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 7.1e-239 831.6 1220 46.1
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.5e-238 829.3 1081 65.8
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 3.9e-237 825.9 1070 64.7
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 8.7e-237 824.7 1105 62.2
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 3.3e-236 822.8 1083 63.3
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 4.8e-235 818.9 1081 63.5
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 4.8e-235 818.9 1074 64.2
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 2.4e-234 816.6 1080 59.1
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 4.0e-234 815.8 1074 64.1
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 2.6e-233 813.1 1081 64.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 5.8e-233 812.0 1070 63.8
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 5.8e-233 812.0 1078 60.2
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 7.6e-233 811.6 1071 63.6
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.7e-230 803.1 1069 65.7
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 5.1e-229 798.9 1067 67.9
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 3.3e-228 796.2 1066 67.0
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 5.7e-228 795.4 1085 62.8
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 1.5e-225 787.3 1048 64.3
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.7e-224 783.9 472 79.7
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.9e-224 783.1 476 79.8
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.9e-223 780.4 1171 42.8
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 2.7e-222 776.5 1096 63.1
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 9.7e-220 768.1 947 72.9
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.3e-219 767.7 816 78.1
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.0e-216 758.1 1070 63.6
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.9e-207 727.2 477 73.0
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.6e-206 724.2 475 72.0
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.8e-202 710.7 811 62.8
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.7e-200 704.1 477 72.1
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 8.0e-198 695.3 1068 56.6
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 2.6e-196 690.3 1089 52.5
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 7.0e-194 682.2 1020 57.2
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 3.8e-184 649.8 1072 59.0
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 4.7e-166 589.7 959 61.7
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.4e-165 588.2 474 59.1
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 4.4e-148 530.0 875 67.2
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.2e-145 521.9 999 51.1
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.8e-134 483.4 360 85.6
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 6.9e-133 479.6 446 56.7
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.8e-128 464.9 813 66.9
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 7.6e-124 449.5 1058 41.9
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.5e-119 435.3 1060 45.0
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 5.5e-114 416.8 240 77.9
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 8.2e-110 402.9 368 62.8
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 2.7e-97 361.3 512 40.0
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 3.1e-93 347.8 205 75.1
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 1.5e-90 339.0 741 57.6
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 3.0e-80 304.7 189 75.7
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 6.5e-75 287.0 490 36.9
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.9e-74 285.4 454 36.8
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 9.1e-69 266.5 370 46.5
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 6.3e-62 243.8 333 60.4
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 8.3e-62 243.4 155 74.2
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 1.9e-58 232.3 265 49.1
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-48 199.5 489 30.9
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 3.1e-48 198.4 209 56.5
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 1.2e-41 176.4 99 82.8
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 4.7e-41 174.5 131 59.5
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 2.9e-38 165.2 181 48.6
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 1.1e-34 153.3 120 67.5
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.2e-33 149.8 127 57.5
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 2.1e-33 149.1 127 57.5
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.4e-31 141.7 80 83.8
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.4e-29 136.3 77 89.6
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 7.1e-29 134.0 80 77.5
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.3e-29 133.7 112 61.6
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.7e-27 129.4 74 73.0
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 6.9e-24 117.5 105 59.0
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.4e-21 109.8 80 62.5
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 4.2e-21 108.2 111 58.6
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 4.0e-16 91.7 141 36.9
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.9e-14 85.5 121 39.7
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 3.3e-10 72.0 185 30.3
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.1e-08 65.5 43 72.1
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 7.6e-07 60.8 49 46.9
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 2.9e-06 58.9 144 36.8
HanXRQChr06g0176501 Helianthus annuus HOM05D004966 ORTHO05D006199 8.4e-06 57.4 46 60.9


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