Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 0.0e+00 1196.0 638 100.0
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 0.0e+00 1117.8 649 93.7
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 0.0e+00 1107.4 639 94.1
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 0.0e+00 1103.6 649 92.8
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 2.2e-298 1028.5 639 87.5
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 2.0e-262 909.1 659 76.9
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 3.7e-237 825.1 662 71.9
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 9.8e-230 800.4 657 69.4
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 3.2e-228 795.4 660 67.0
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 3.2e-228 795.4 648 69.4
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 9.2e-228 793.9 660 66.7
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 2.0e-227 792.7 660 65.6
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 1.2e-224 783.5 651 66.4
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 1.2e-222 776.9 659 64.9
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 7.5e-222 774.2 658 68.2
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 9.9e-222 773.9 636 64.2
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 1.7e-221 773.1 662 65.1
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 1.3e-218 763.5 665 63.8
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 1.9e-217 759.6 656 63.1
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 5.6e-217 758.1 658 64.3
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.2e-214 750.4 589 67.9
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 6.4e-213 744.6 681 62.4
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.1e-212 743.8 539 75.7
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 1.0e-210 737.3 664 65.1
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 5.1e-210 734.9 598 67.4
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.9e-209 733.0 604 66.2
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 1.2e-208 730.3 666 64.1
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 6.2e-208 728.0 603 66.2
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 4.0e-207 725.3 609 68.5
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 9.0e-207 724.2 609 66.5
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 9.0e-207 724.2 660 59.8
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 1.5e-206 723.4 588 67.3
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 2.2e-205 719.5 607 65.1
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.2e-205 719.5 608 64.6
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 4.9e-205 718.4 596 68.8
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 8.4e-205 717.6 626 64.7
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.4e-204 716.8 652 63.0
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 3.2e-204 715.7 647 61.8
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 5.4e-204 714.9 662 62.8
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 9.3e-204 714.1 663 59.7
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 9.3e-204 714.1 635 60.9
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 9.3e-204 714.1 647 62.0
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 1.2e-203 713.8 620 64.4
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 2.7e-203 712.6 622 62.1
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 2.7e-203 712.6 593 65.8
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 6.6e-202 708.0 647 58.9
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 5.6e-201 704.9 656 63.1
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 3.6e-200 702.2 659 60.2
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 3.6e-200 702.2 656 59.6
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 4.5e-198 695.3 653 60.6
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 3.8e-197 692.2 667 60.0
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 6.4e-197 691.4 660 60.3
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 8.4e-197 691.0 680 59.0
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 7.1e-196 688.0 633 61.0
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 2.7e-195 686.0 662 60.1
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 3.0e-194 682.6 654 59.0
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 4.3e-193 678.7 642 58.6
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.8e-192 676.0 631 61.6
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 5.3e-191 671.8 611 63.8
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 1.2e-190 670.6 609 64.2
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.5e-190 670.2 671 60.1
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 2.0e-190 669.8 648 60.6
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 2.0e-190 669.8 455 80.7
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 4.5e-190 668.7 610 63.1
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 1.7e-189 666.8 589 64.5
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 2.2e-189 666.4 671 59.6
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 1.1e-188 664.1 660 57.1
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 1.4e-188 663.7 589 64.7
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 9.3e-188 661.0 614 62.1
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 2.1e-187 659.8 671 59.2
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 4.6e-187 658.7 663 57.0
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.9e-186 655.6 588 59.5
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.9e-186 655.6 589 64.3
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 6.7e-186 654.8 582 61.2
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 1.9e-185 653.3 661 56.9
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.4e-183 647.1 567 63.3
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 6.9e-183 644.8 595 58.8
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.2e-182 644.0 591 62.8
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 7.6e-182 641.3 585 62.1
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 3.8e-181 639.0 565 63.2
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 5.5e-180 635.2 585 60.5
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 9.3e-180 634.4 604 61.6
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.2e-179 634.0 592 62.7
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 1.0e-178 630.9 588 63.3
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 8.7e-178 627.9 655 56.3
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 2.5e-177 626.3 606 60.7
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 2.8e-176 622.9 586 60.2
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 8.2e-176 621.3 529 68.8
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.4e-175 620.5 536 61.8
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 5.9e-174 615.1 612 58.8
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 3.6e-171 605.9 440 74.3
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 8.8e-162 574.7 606 55.0
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 3.7e-160 569.3 606 54.3
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.4e-156 557.4 557 55.1
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 1.2e-147 527.7 552 56.0
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 2.2e-144 516.9 651 47.0
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 4.1e-143 512.7 590 50.0
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 2.3e-125 453.8 610 48.4
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 1.1e-98 365.2 286 64.3
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 1.4e-74 285.0 440 39.3
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 1.4e-74 285.0 440 39.3
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 3.3e-68 263.8 452 41.2
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.6e-57 227.6 429 34.7
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 3.6e-30 137.5 195 42.1
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 4.8e-27 127.1 145 51.0
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.0e-25 121.7 149 49.0
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 7.7e-17 93.2 145 42.8
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 6.6e-16 90.1 202 31.2
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.4e-13 82.4 105 42.9
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.4e-10 72.4 126 40.5
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.4e-10 72.4 99 46.5
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 3.2e-10 71.2 112 32.1
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 9.2e-10 69.7 50 54.0
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 2.7e-09 68.2 123 34.1
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 3.5e-09 67.8 85 37.6
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 5.6e-07 60.5 199 29.1


User provided reference genes

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