Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.3e-279 965.7 474 100.0
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 5.4e-265 917.1 472 96.2
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.1e-253 878.6 475 92.0
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 1.2e-251 872.8 475 92.4
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.7e-226 789.3 475 84.2
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 7.1e-201 704.1 474 73.6
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 1.0e-199 700.3 476 74.2
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 2.0e-179 632.9 474 66.9
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 1.1e-177 627.1 451 69.4
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 3.2e-177 625.5 472 66.3
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.4e-175 620.2 483 65.4
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 4.5e-171 605.1 482 64.9
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 1.0e-170 604.0 475 63.2
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 1.9e-169 599.7 476 64.3
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 7.2e-169 597.8 482 64.3
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 3.6e-168 595.5 479 62.8
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.0e-167 594.0 479 62.6
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 2.3e-167 592.8 472 63.6
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 3.9e-167 592.0 472 62.7
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 1.7e-165 586.6 478 62.3
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.8e-164 583.2 478 63.2
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 4.1e-164 582.0 469 62.9
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 5.0e-162 575.1 478 61.7
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 5.0e-162 575.1 473 61.9
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 1.1e-161 573.9 426 66.0
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 8.0e-160 567.8 484 60.1
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 2.0e-158 563.1 477 61.4
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 7.0e-156 554.7 472 61.2
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 7.0e-156 554.7 469 61.8
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 9.1e-156 554.3 481 59.7
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 5.9e-155 551.6 482 59.3
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.7e-154 550.1 474 58.6
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 5.0e-154 548.5 468 60.5
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 5.0e-154 548.5 480 56.7
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 8.5e-154 547.7 477 60.2
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 8.5e-154 547.7 453 60.3
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 1.5e-153 547.0 487 59.5
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 1.9e-153 546.6 470 57.0
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 1.6e-152 543.5 468 56.8
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.7e-152 542.7 479 59.3
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.8e-151 540.0 473 58.1
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 1.2e-150 537.3 477 57.9
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 1.2e-150 537.3 440 62.5
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 9.8e-150 534.3 473 56.9
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.8e-149 532.7 486 57.0
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 4.1e-148 528.9 529 53.7
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 1.6e-147 526.9 471 56.1
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 5.9e-147 525.0 505 53.7
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 7.7e-147 524.6 470 56.0
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 1.0e-146 524.2 508 51.8
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 2.9e-146 522.7 476 57.6
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 6.5e-146 521.5 478 55.4
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 6.5e-146 521.5 478 55.4
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 8.6e-146 521.2 476 57.4
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 1.1e-145 520.8 486 57.0
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 1.5e-145 520.4 481 55.9
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 2.5e-145 519.6 479 56.6
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 7.2e-145 518.1 499 54.3
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 9.5e-145 517.7 478 56.3
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 9.5e-145 517.7 471 56.7
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 1.6e-144 516.9 476 54.8
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 2.1e-144 516.5 473 56.2
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 2.8e-144 516.2 480 55.2
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 2.8e-144 516.2 477 56.4
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.6e-144 515.8 472 56.4
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 6.1e-144 515.0 479 56.4
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 1.0e-143 514.2 473 55.4
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 1.4e-143 513.8 469 57.4
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 1.8e-143 513.5 471 55.0
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 1.8e-143 513.5 469 56.7
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 4.0e-143 512.3 472 54.9
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 5.2e-143 511.9 472 55.5
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 1.2e-142 510.8 472 54.7
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 1.2e-142 510.8 472 54.7
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.7e-142 508.4 473 55.2
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 9.8e-142 507.7 481 56.5
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 8.3e-141 504.6 481 55.3
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 5.9e-139 498.4 509 53.2
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 5.9e-139 498.4 476 54.4
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.2e-136 490.7 474 53.6
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 6.1e-136 488.4 484 55.2
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 1.8e-135 486.9 472 55.7
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 3.0e-135 486.1 484 54.8
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 5.2e-135 485.3 504 51.2
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 3.2e-132 476.1 498 50.8
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 4.6e-131 472.2 353 66.6
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 1.0e-130 471.1 366 65.6
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 3.4e-126 456.1 338 65.4
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 4.4e-126 455.7 362 62.4
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 2.5e-121 439.9 459 51.6
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 2.8e-120 436.4 437 52.2
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 1.2e-118 431.0 463 47.1
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 7.8e-115 418.3 500 47.0
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 1.3e-114 417.5 398 55.5
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 5.1e-114 415.6 399 55.4
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 3.1e-103 379.8 473 45.9
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 4.6e-99 365.9 298 62.1
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 7.8e-99 365.2 522 37.2
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 5.3e-95 352.4 383 48.0
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 3.8e-93 346.3 356 51.7
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.2e-91 341.3 475 39.4
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 7.4e-89 332.0 447 41.4
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 9.6e-89 331.6 495 38.4
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.1e-87 328.2 473 37.6
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.6e-78 297.0 471 35.0
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 4.2e-60 236.5 477 34.2
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 3.7e-48 196.8 455 29.5
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 4.5e-46 189.9 273 39.6
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.6e-43 181.4 242 47.1
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 6.1e-43 179.5 265 39.2
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 6.3e-40 169.5 253 35.6
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 5.9e-38 162.9 326 32.2
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.0e-37 159.8 162 53.1
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.2e-36 156.8 162 51.9
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 1.2e-27 128.6 78 80.8
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 5.4e-23 113.2 107 58.9
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 8.6e-21 105.9 91 51.6
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 4.3e-20 103.6 68 69.1
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 4.7e-19 100.1 115 45.2
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 2.6e-17 94.4 260 25.8
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 5.4e-15 86.7 117 43.6
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.9e-13 80.5 84 47.6
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.4e-10 72.0 48 66.7


User provided reference genes

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