Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2869 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.4e-44 182.6 89 100.0
FAN25G3871 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.4e-44 182.6 89 100.0
FAN11G1309 Fragaria x ananassa HOM05D002273 ORTHO05D000818 5.7e-11 70.9 35 91.4
FvH4_3g39340 Fragaria vesca HOM05D002273 ORTHO05D000818 6.3e-10 67.4 35 85.7
FAN11G3011 Fragaria x ananassa HOM05D002273 ORTHO05D000818 6.3e-10 67.4 35 85.7
FvH4_3g38380 Fragaria vesca HOM05D002273 ORTHO05D000818 3.1e-09 65.1 35 82.9
FAN11G3950 Fragaria x ananassa HOM05D002273 ORTHO05D000818 3.1e-09 65.1 35 82.9
FAN16G0184 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.6e-08 62.8 35 80.0
FvH4_3g05270 Fragaria vesca HOM05D002273 ORTHO05D000818 2.7e-08 62.0 35 77.1
CSS0000286 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 4.5e-08 61.2 44 56.8
CSS0050412 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 4.5e-08 61.2 44 59.1
FvH4_3g09690 Fragaria vesca HOM05D002273 ORTHO05D000818 7.8e-08 60.5 35 74.3
FAN11G0922 Fragaria x ananassa HOM05D002273 ORTHO05D000818 7.8e-08 60.5 35 74.3
FAN25G1613 Fragaria x ananassa HOM05D002273 ORTHO05D000818 7.8e-08 60.5 35 74.3
FAN25G3717 Fragaria x ananassa HOM05D002273 ORTHO05D000818 7.8e-08 60.5 35 74.3
Hma1.2p1_0383F.1_g140410 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 7.8e-08 60.5 35 74.3
RcHm_v2.0_Chr5g0014451 Rosa chinensis HOM05D002273 ORTHO05D000818 7.8e-08 60.5 44 61.4
GSVIVG01022452001 Vitis vinifera HOM05D002273 ORTHO05D000818 7.8e-08 60.5 34 76.5
Prupe.1G158200 Prunus persica HOM05D002273 ORTHO05D000818 1.0e-07 60.1 35 74.3
RcHm_v2.0_Chr4g0415011 Rosa chinensis HOM05D002273 ORTHO05D000818 1.0e-07 60.1 34 76.5
FAN12G1031 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.3e-07 59.7 44 56.8
FAN07G0910 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.7e-07 59.3 44 56.8
Prupe.1G157300 Prunus persica HOM05D002273 ORTHO05D000818 1.7e-07 59.3 34 73.5
Dinv27227 Davidia involucrata HOM05D002273 ORTHO05D000818 2.3e-07 58.9 34 70.6
CSS0048802 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 2.9e-07 58.5 35 68.6
Dinv25029 Davidia involucrata HOM05D002273 ORTHO05D000818 2.9e-07 58.5 34 70.6
Hma1.2p1_1223F.1_g268330 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 2.9e-07 58.5 33 72.7
Hma1.2p1_2122F.1_g314510 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 2.9e-07 58.5 33 72.7
GSVIVG01022448001 Vitis vinifera HOM05D002273 ORTHO05D000818 3.9e-07 58.2 34 73.5
Prupe.1G157900 Prunus persica HOM05D002273 ORTHO05D000818 5.0e-07 57.8 33 75.8
Aqoxy1G02125 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 6.6e-07 57.4 49 51.0
FvH4_6g09690 Fragaria vesca HOM05D002273 ORTHO05D000818 6.6e-07 57.4 33 72.7
FAN05G0328 Fragaria x ananassa HOM05D002273 ORTHO05D000818 6.6e-07 57.4 33 72.7
FAN14G3153 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.6e-07 57.4 33 72.7
Prupe.1G158100 Prunus persica HOM05D002273 ORTHO05D000818 6.6e-07 57.4 33 72.7
RcHm_v2.0_Chr4g0414631 Rosa chinensis HOM05D002273 ORTHO05D000818 6.6e-07 57.4 34 70.6
RcHm_v2.0_Chr4g0414641 Rosa chinensis HOM05D002273 ORTHO05D000818 6.6e-07 57.4 34 70.6
Aqoxy4G03045 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 8.6e-07 57.0 50 50.0
Actinidia27496 Actinidia chinensis HOM05D002273 ORTHO05D000818 1.1e-06 56.6 35 65.7
FvH4_4g13890 Fragaria vesca HOM05D002273 ORTHO05D000818 1.1e-06 56.6 44 56.8
FAN01G0572 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.1e-06 56.6 34 61.8
FAN09G0900 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.1e-06 56.6 35 65.7
Hma1.2p1_0383F.1_g140320 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 1.1e-06 56.6 33 69.7
Hma1.2p1_0383F.1_g140340 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 1.1e-06 56.6 33 69.7
RcHm_v2.0_Chr3g0460331 Rosa chinensis HOM05D002273 ORTHO05D000818 1.1e-06 56.6 44 54.5
RcHm_v2.0_Chr6g0308401 Rosa chinensis HOM05D002273 ORTHO05D000818 1.1e-06 56.6 35 68.6
vmacro15541 Vaccinium macrocarpon HOM05D002273 ORTHO05D000818 1.1e-06 56.6 35 71.4
Aqoxy4G03043 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 1.5e-06 56.2 56 50.0
Aqoxy4G03044 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 1.5e-06 56.2 64 42.2
FvH4_4g13771 Fragaria vesca HOM05D002273 ORTHO05D000818 1.5e-06 56.2 35 68.6
FvH4_7g19271 Fragaria vesca HOM05D002273 ORTHO05D000818 1.5e-06 56.2 34 64.7
FAN02G4400 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.5e-06 56.2 33 69.7
FAN06G4436 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.5e-06 56.2 34 64.7
FAN07G1398 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.5e-06 56.2 35 68.6
FAN12G1649 Fragaria x ananassa HOM05D002747 ORTHO05D003069 1.5e-06 56.2 35 68.6
FAN21G2209 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.5e-06 56.2 44 54.5
Lj6C542T3 Lonicera japonica HOM05D002273 ORTHO05D000818 1.5e-06 56.2 35 68.6
Lj6C545G2 Lonicera japonica HOM05D002273 ORTHO05D000818 1.5e-06 56.2 35 68.6
Nn7g37455 Nelumbo nucifera HOM05D002273 ORTHO05D000818 1.5e-06 56.2 44 56.8
QL08p005039 Quercus lobata HOM05D002273 ORTHO05D000818 1.5e-06 56.2 44 52.3
Lj6C545G3 Lonicera japonica HOM05D002273 ORTHO05D000818 1.9e-06 55.8 35 65.7
FAN03G0826 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.5e-06 55.5 34 61.8
Potri.016G019500 Populus trichocarpa HOM05D002273 ORTHO05D000818 2.5e-06 55.5 34 70.6
GSVIVG01037130001 Vitis vinifera HOM05D002273 ORTHO05D000818 2.5e-06 55.5 34 67.6
FvH4_7g19272 Fragaria vesca HOM05D002273 ORTHO05D000818 3.3e-06 55.1 34 61.8
Lj6C540T3 Lonicera japonica HOM05D002273 ORTHO05D000818 3.3e-06 55.1 35 65.7
Lj6C542G4 Lonicera japonica HOM05D002273 ORTHO05D000818 3.3e-06 55.1 35 65.7
Aqoxy6G01827 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 4.3e-06 54.7 34 64.7
Cc10_g05480 Coffea canephora HOM05D002273 ORTHO05D000818 5.6e-06 54.3 44 50.0
FvH4_3g05260 Fragaria vesca HOM05D002273 ORTHO05D000818 5.6e-06 54.3 28 85.7
FvH4_3g06260 Fragaria vesca HOM05D002273 ORTHO05D000818 5.6e-06 54.3 44 52.3
Dinv21990 Davidia involucrata HOM05D002273 ORTHO05D000818 7.3e-06 53.9 35 65.7
Dinv30109 Davidia involucrata HOM05D002273 ORTHO05D000818 7.3e-06 53.9 35 65.7
Duzib114G0913 Durio zibethinus HOM05D002273 ORTHO05D000818 7.3e-06 53.9 35 65.7
Lj6A539T24 Lonicera japonica HOM05D002273 ORTHO05D000818 7.3e-06 53.9 32 68.8
Lj6C541G0 Lonicera japonica HOM05D002273 ORTHO05D000818 9.5e-06 53.5 35 62.9
Lj6P537T6 Lonicera japonica HOM05D002273 ORTHO05D000818 9.5e-06 53.5 35 62.9
Prupe.1G158000 Prunus persica HOM05D002273 ORTHO05D000818 9.5e-06 53.5 34 67.6
Sabra16G0021600 Salix brachista HOM05D002273 ORTHO05D000818 9.5e-06 53.5 35 65.7
Sabra16G0026300 Salix brachista HOM05D002273 ORTHO05D000818 9.5e-06 53.5 35 65.7
vmacro08618 Vaccinium macrocarpon HOM05D002273 ORTHO05D000818 9.5e-06 53.5 34 64.7
vmacro15545 Vaccinium macrocarpon HOM05D002273 ORTHO05D000818 9.5e-06 53.5 80 41.2
GSVIVG01006146001 Vitis vinifera HOM05D002273 ORTHO05D000818 9.5e-06 53.5 33 69.7


User provided reference genes

Program Settings