Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.2e-194 682.9 344 100.0
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.4e-193 679.5 344 99.4
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.0e-193 678.3 344 99.7
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 7.5e-192 673.7 344 99.1
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.5e-192 673.7 343 98.8
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.7e-184 647.5 329 98.8
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 2.9e-180 635.2 344 93.3
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 6.8e-153 544.3 338 80.5
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 3.4e-152 542.0 342 79.2
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 6.0e-149 531.2 338 78.1
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 1.6e-133 479.9 342 70.2
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 4.6e-133 478.4 323 70.6
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 7.9e-133 477.6 344 69.8
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 2.5e-131 472.6 334 70.7
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 3.7e-130 468.8 346 67.9
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 4.8e-130 468.4 345 69.0
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.4e-129 466.8 344 67.2
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 2.6e-128 462.6 341 67.4
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 2.6e-128 462.6 341 67.4
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 7.6e-128 461.1 345 68.1
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 1.0e-127 460.7 336 68.2
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.7e-127 459.9 327 70.9
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 4.9e-127 458.4 326 71.2
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 2.5e-126 456.1 347 66.3
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 4.2e-126 455.3 320 70.6
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 9.3e-126 454.1 334 68.0
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 1.2e-125 453.8 328 70.1
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 3.5e-125 452.2 326 67.8
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 4.6e-125 451.8 343 65.6
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 7.9e-125 451.1 329 68.4
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 1.3e-124 450.3 341 64.8
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 3.0e-124 449.1 338 65.7
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 3.9e-124 448.7 326 66.9
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 1.1e-123 447.2 342 65.5
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.5e-123 446.8 327 65.1
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 3.3e-123 445.7 332 66.6
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 4.3e-123 445.3 333 64.9
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 9.6e-123 444.1 341 64.5
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.3e-122 443.7 333 65.2
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 1.6e-122 443.4 342 65.2
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 2.1e-122 443.0 333 64.6
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 3.7e-122 442.2 336 65.2
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 6.2e-122 441.4 342 62.9
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 8.2e-122 441.0 338 64.5
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 1.4e-121 440.3 342 62.9
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 2.4e-121 439.5 343 65.0
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 4.1e-121 438.7 336 63.4
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 5.3e-121 438.3 339 63.1
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 6.9e-121 438.0 339 63.7
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 9.0e-121 437.6 336 63.4
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 1.5e-120 436.8 339 62.8
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.5e-120 436.8 338 63.0
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 1.5e-120 436.8 333 66.1
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 2.0e-120 436.4 339 63.7
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 2.6e-120 436.0 330 63.9
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 2.6e-120 436.0 339 62.8
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.6e-120 436.0 329 68.7
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 5.8e-120 434.9 338 63.0
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 1.7e-119 433.3 344 64.0
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 2.9e-119 432.6 340 64.1
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 8.4e-119 431.0 339 62.2
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 8.4e-119 431.0 328 64.6
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 1.9e-118 429.9 334 65.3
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 3.2e-118 429.1 339 61.9
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 5.5e-118 428.3 336 64.3
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 1.2e-117 427.2 333 65.8
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 2.1e-117 426.4 335 62.4
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 2.7e-117 426.0 341 62.8
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 3.5e-117 425.6 341 62.5
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 7.9e-117 424.5 324 66.0
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 1.3e-116 423.7 341 62.2
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 5.1e-116 421.8 368 57.9
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 3.3e-115 419.1 342 62.3
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 1.3e-114 417.2 320 65.3
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 1.6e-114 416.8 320 65.3
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 2.8e-114 416.0 320 65.0
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 3.7e-114 415.6 323 63.8
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 8.2e-114 414.5 328 63.1
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.1e-113 414.1 333 64.3
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 1.4e-113 413.7 342 62.0
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 1.8e-113 413.3 320 65.3
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.8e-113 413.3 341 60.7
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 2.4e-113 412.9 328 63.1
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 6.9e-113 411.4 332 63.3
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 1.2e-112 410.6 320 64.4
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 2.6e-112 409.5 341 60.7
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 3.4e-112 409.1 319 61.8
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 2.9e-111 406.0 328 61.9
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 8.5e-111 404.4 329 61.4
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.4e-110 403.7 341 60.4
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 1.4e-110 403.7 319 62.1
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 9.4e-110 401.0 335 60.6
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.6e-109 400.2 339 59.0
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 6.1e-109 398.3 332 60.8
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 2.3e-108 396.4 326 61.7
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 5.1e-108 395.2 325 60.6
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 1.1e-107 394.0 328 60.7
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 1.1e-107 394.0 328 60.7
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 1.1e-107 394.0 344 58.4
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 1.7e-106 390.2 335 59.4
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 1.7e-106 390.2 333 59.8
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 3.7e-106 389.0 334 60.5
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 1.4e-105 387.1 324 62.0
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 3.2e-102 375.9 263 67.7
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 7.9e-101 371.3 333 57.1
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 6.7e-100 368.2 322 58.1
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 2.0e-99 366.7 319 56.1
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 5.3e-97 358.6 328 55.8
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 3.5e-96 355.9 287 61.0
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 4.0e-84 315.8 254 62.2
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.4e-81 306.6 332 50.6
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 2.7e-80 303.1 323 46.1
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 1.0e-76 291.2 365 41.4
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 1.2e-67 261.2 330 42.4
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 3.5e-64 249.6 226 56.2
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 1.3e-58 231.1 184 60.9
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 2.2e-58 230.3 184 60.9
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.9e-58 229.9 175 64.6
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 3.7e-58 229.6 254 50.4
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 1.2e-53 214.5 325 38.5
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 3.7e-50 203.0 149 65.8
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 2.4e-49 200.3 136 73.5
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 6.6e-47 192.2 161 60.2
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 6.8e-44 182.2 290 35.5
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 3.2e-41 173.3 142 60.6
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 7.3e-38 162.2 101 78.2
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 4.0e-36 156.4 118 68.6
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 4.0e-36 156.4 134 65.7
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 6.8e-36 155.6 118 63.6
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 6.8e-36 155.6 340 30.6
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 7.6e-35 152.1 111 69.4
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 1.3e-34 151.4 116 62.9
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 1.3e-34 151.4 100 73.0
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 1.7e-34 151.0 100 73.0
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 2.2e-34 150.6 265 33.6
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 2.9e-34 150.2 123 58.5
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 1.0e-31 141.7 98 66.3
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.5e-30 137.9 198 39.4
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 8.1e-29 132.1 171 40.4
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 2.2e-26 124.0 85 70.6
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 2.2e-26 124.0 85 70.6
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 4.2e-25 119.8 157 41.4
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 9.3e-25 118.6 184 40.8
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 2.3e-23 114.0 165 32.7
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 2.8e-21 107.1 137 46.0
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 1.4e-20 104.8 139 45.3
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 3.4e-19 100.1 134 46.3
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 2.9e-18 97.1 110 46.4
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 6.7e-15 85.9 97 48.5
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 4.0e-12 76.6 56 67.9
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 4.5e-11 73.2 131 42.7
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 5.8e-11 72.8 44 79.5
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 4.9e-10 69.7 49 69.4
BcaC08g46242 Brassica carinata HOM05D004841 ORTHO05D005874 1.9e-06 57.8 40 62.5
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 4.3e-06 56.6 128 38.3


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