Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G0840 Fragaria x ananassa HOM05D006800 ORTHO05D008478 2.9e-252 874.8 447 100.0
FvH4_3g20740 Fragaria vesca HOM05D006800 ORTHO05D008478 1.2e-218 763.1 465 87.1
FAN11G0427 Fragaria x ananassa HOM05D006800 ORTHO05D008478 2.4e-206 722.2 465 83.9
RcHm_v2.0_Chr5g0034961 Rosa chinensis HOM05D006800 ORTHO05D008478 5.0e-204 714.5 465 83.2
Prupe.4G187400 Prunus persica HOM05D006800 ORTHO05D008478 4.0e-185 651.7 465 74.6
MD03G1222300 Malus domestica HOM05D006800 ORTHO05D008478 3.3e-184 648.7 462 76.4
Manes.03G114600 Manihot esculenta HOM05D006800 ORTHO05D008478 6.8e-169 597.8 470 69.6
Ciclev10008220m.g Citrus clementina HOM05D006800 ORTHO05D008478 4.4e-168 595.1 466 68.2
CiPaw.12G122000 Carya illinoinensis HOM05D006800 ORTHO05D008478 5.7e-168 594.7 474 68.4
Sed0026398 Sechium edule HOM05D006800 ORTHO05D008478 4.5e-165 585.1 450 69.3
Potri.001G404700 Populus trichocarpa HOM05D006800 ORTHO05D008478 2.3e-164 582.8 477 66.5
QL08p019137 Quercus lobata HOM05D006800 ORTHO05D008478 1.6e-162 576.6 401 76.6
Sabra16G0266000 Salix brachista HOM05D006800 ORTHO05D008478 1.1e-158 563.9 471 66.5
GSVIVG01014408001 Vitis vinifera HOM05D006800 ORTHO05D008478 5.4e-158 561.6 467 66.0
ClCG10G006680 Citrullus lanatus HOM05D006800 ORTHO05D008478 4.6e-157 558.5 470 64.9
Atru.chr2.2809 Acer truncatum HOM05D006800 ORTHO05D008478 6.0e-157 558.1 474 65.0
Nitab4.5_0001610g0020 Nicotiana tabacum HOM05D006800 ORTHO05D008478 6.0e-157 558.1 449 66.6
Ciclev10008058m.g Citrus clementina HOM05D006800 ORTHO05D008478 7.8e-157 557.8 512 61.1
Eucgr.F01089 Eucalyptus grandis HOM05D006800 ORTHO05D008478 7.8e-157 557.8 398 71.6
CANSAT11G1341 Cannabis sativa HOM05D006800 ORTHO05D008478 1.7e-156 556.6 392 73.7
CsaV3_3G006070 Cucumis sativus L. HOM05D006800 ORTHO05D008478 1.7e-156 556.6 476 63.7
TWI39G0599 Tripterygium wilfordii HOM05D006800 ORTHO05D008478 2.3e-156 556.2 403 72.7
THA.LOC104818055 Tarenaya hassleriana HOM05D006800 ORTHO05D008478 3.9e-156 555.4 467 65.7
Cpa.g.sc80.97 Carica papaya HOM05D006800 ORTHO05D008478 8.6e-156 554.3 404 73.5
Duzib268G1025 Durio zibethinus HOM05D006800 ORTHO05D008478 4.3e-155 552.0 397 73.3
Peaxi162Scf00000g00497 Petunia axillaris HOM05D006800 ORTHO05D008478 5.6e-155 551.6 362 77.1
PGR083G0724 Punica granatum HOM05D006800 ORTHO05D008478 7.3e-155 551.2 401 71.1
Thecc.07G074700 Theobroma cacao HOM05D006800 ORTHO05D008478 1.8e-153 546.6 469 65.2
Gohir.A11G282747 Gossypium hirsutum HOM05D006800 ORTHO05D008478 3.1e-153 545.8 468 64.7
Gohir.D11G296300 Gossypium hirsutum HOM05D006800 ORTHO05D008478 3.1e-153 545.8 468 65.2
Rhsim06G0193900 Rhododendron simsii HOM05D006800 ORTHO05D008478 5.2e-153 545.0 466 65.2
Gorai.007G319400 Gossypium raimondii HOM05D006800 ORTHO05D008478 6.8e-153 544.7 468 65.2
vmacro11823 Vaccinium macrocarpon HOM05D006800 ORTHO05D008478 2.2e-151 539.7 469 64.4
ECA240G3736 Erigeron canadensis HOM05D006800 ORTHO05D008478 6.4e-151 538.1 379 72.0
COL.COLO4_03558 Corchorus olitorius HOM05D006800 ORTHO05D008478 1.9e-150 536.6 382 74.3
Nitab4.5_0000662g0050 Nicotiana tabacum HOM05D006800 ORTHO05D008478 2.7e-149 532.7 380 71.3
HanXRQChr10g0289501 Helianthus annuus HOM05D006800 ORTHO05D008478 4.6e-149 531.9 464 61.9
DCAR_013080 Daucus carota HOM05D006800 ORTHO05D008478 6.0e-149 531.6 399 69.4
Lsat_1_v5_gn_9_95880 Lactuca sativa HOM05D006800 ORTHO05D008478 1.3e-148 530.4 463 62.0
Hma1.2p1_2417F.1_g321750 Hydrangea macrophylla HOM05D006800 ORTHO05D008478 3.0e-148 529.3 418 67.5
Lalb_Chr19g0134361 Lupinus albus HOM05D006800 ORTHO05D008478 8.6e-148 527.7 470 62.6
Aa31LG8G2760 Aethionema arabicum HOM05D006800 ORTHO05D008478 1.9e-147 526.6 467 63.0
Cc05_g12540 Coffea canephora HOM05D006800 ORTHO05D008478 1.9e-147 526.6 466 60.7
MSTRG.14374 Avicennia marina HOM05D006800 ORTHO05D008478 2.1e-146 523.1 469 62.3
PGSC0003DMG400008569 Solanum tuberosum HOM05D006800 ORTHO05D008478 2.8e-146 522.7 380 71.6
Carub.0003s1525 Capsella rubella HOM05D006800 ORTHO05D008478 3.6e-146 522.3 464 61.6
Solyc12g013580.3 Solanum lycopersicum HOM05D006800 ORTHO05D008478 8.1e-146 521.2 468 62.0
Phvul.011G148100 Phaseolus vulgaris HOM05D006800 ORTHO05D008478 1.4e-145 520.4 382 71.7
AT3G15520 Arabidopsis thaliana HOM05D006800 ORTHO05D008478 2.3e-145 519.6 465 61.9
SalBow7G3299 Salvia bowleyana HOM05D006800 ORTHO05D008478 2.3e-145 519.6 380 69.2
AL3G28100 Arabidopsis lyrata HOM05D006800 ORTHO05D008478 3.1e-145 519.2 465 61.9
VMungo1127G1600 Vigna mungo HOM05D006800 ORTHO05D008478 3.1e-145 519.2 383 71.5
Sopen12g006940 Solanum pennellii HOM05D006800 ORTHO05D008478 4.0e-145 518.8 466 62.4
Migut.H01913 Erythranthe guttata HOM05D006800 ORTHO05D008478 5.2e-145 518.5 397 68.0
CAN.G433.18 Capsicum annuum HOM05D006800 ORTHO05D008478 6.8e-145 518.1 476 61.6
PSO541G1958 Papaver somniferum HOM05D006800 ORTHO05D008478 9.9e-144 514.2 383 71.0
Sp3g13780 Schrenkiella parvula HOM05D006800 ORTHO05D008478 1.7e-143 513.5 462 60.6
EL10Ac4g08093 Beta vulgaris HOM05D006800 ORTHO05D008478 3.7e-143 512.3 403 67.0
BcaC05g28965 Brassica carinata HOM05D006800 ORTHO05D008478 3.7e-143 512.3 466 60.1
Hund15928 Selenicereus undatus HOM05D006800 ORTHO05D008478 3.7e-143 512.3 382 70.2
SGA_v2.0_scaffold9G04949 Striga asiatica HOM05D006800 ORTHO05D008478 1.1e-142 510.8 381 69.6
Thhalv10020685m.g Eutrema salsugineum HOM05D006800 ORTHO05D008478 1.4e-142 510.4 458 60.5
Glyma.12G148600 Glycine max HOM05D006800 ORTHO05D008478 1.9e-142 510.0 385 70.1
PSO675G5315 Papaver somniferum HOM05D006800 ORTHO05D008478 4.1e-142 508.8 384 69.5
unitig_899.g15558 Utricularia gibba HOM05D006800 ORTHO05D008478 7.1e-142 508.1 461 59.4
BraA05t22211Z Brassica rapa HOM05D006800 ORTHO05D008478 1.2e-141 507.3 478 59.4
BcaB06g29587 Brassica carinata HOM05D006800 ORTHO05D008478 2.1e-141 506.5 468 60.0
Medtr8g059435 Medicago truncatula HOM05D006800 ORTHO05D008478 3.5e-141 505.8 387 68.7
Dinv22373 Davidia involucrata HOM05D006800 ORTHO05D008478 4.6e-141 505.4 416 67.1
BolC5t33848H Brassica oleracea HOM05D006800 ORTHO05D008478 1.7e-140 503.4 472 59.3
A05p33890 Brassica napus HOM05D006800 ORTHO05D008478 2.3e-140 503.1 470 59.8
Cfa020530 Carpinus fangiana HOM05D006800 ORTHO05D008478 3.0e-140 502.7 418 67.5
Ca_23043_v3 Cicer arietinum L. HOM05D006800 ORTHO05D008478 3.9e-140 502.3 381 70.1
Psat7g032000 Pisum sativum HOM05D006800 ORTHO05D008478 1.5e-139 500.4 383 68.4
C05p51600 Brassica napus HOM05D006800 ORTHO05D008478 3.3e-139 499.2 466 59.2
AUR62015625 Chenopodium quinoa HOM05D006800 ORTHO05D008478 5.6e-139 498.4 456 60.5
MELO3C016542.2 Cucumis melo HOM05D006800 ORTHO05D008478 5.6e-139 498.4 466 60.3
Nn1g03972 Nelumbo nucifera HOM05D006800 ORTHO05D008478 9.5e-139 497.7 464 62.1
TPR.G29364 Trifolium pratense HOM05D006800 ORTHO05D008478 2.1e-138 496.5 472 59.5
HPP92_001820 Vanilla planifolia HOM05D006800 ORTHO05D008478 4.7e-138 495.4 379 68.3
Lj3g0016801 Lotus japonicus HOM05D006800 ORTHO05D008478 1.5e-136 490.3 469 60.6
Glyma.06G249300 Glycine max HOM05D006800 ORTHO05D008478 6.4e-135 485.0 379 68.3
Os07g0565600 Oryza sativa ssp. japonica HOM05D006800 ORTHO05D008478 2.4e-134 483.0 390 64.1
arahy.Tifrunner.gnm1.ann1.F90IWS Arachis hypogaea HOM05D006800 ORTHO05D008478 2.7e-133 479.6 384 68.8
AUR62029335 Chenopodium quinoa HOM05D006800 ORTHO05D008478 2.7e-133 479.6 366 69.1
arahy.Tifrunner.gnm1.ann1.6T6X8W Arachis hypogaea HOM05D006800 ORTHO05D008478 3.5e-133 479.2 384 68.5
Zm00001eb107080 Zea mays HOM05D006800 ORTHO05D008478 5.1e-132 475.3 404 62.6
ATR0693G395 Amborella trichopoda HOM05D006800 ORTHO05D008478 2.5e-131 473.0 380 65.5
CDE02G3099 Ceratophyllum demersum HOM05D006800 ORTHO05D008478 3.6e-130 469.2 386 65.0
TAR674G0003 Trochodendron aralioides HOM05D006800 ORTHO05D008478 7.6e-128 461.5 365 68.5
Haze_09503 Corylus avellana HOM05D006800 ORTHO05D008478 5.4e-126 455.3 521 55.1
SEGI_03689 Sequoiadendron giganteum HOM05D006800 ORTHO05D008478 3.0e-124 449.5 376 62.2
Pp3c3_20400 Physcomitrium patens HOM05D006800 ORTHO05D008478 1.6e-122 443.7 381 59.8
Sc16g0006830 Simmondsia chinensis HOM05D006800 ORTHO05D008478 6.2e-122 441.8 341 68.9
Oeu055670.1 Olea europaea HOM05D006800 ORTHO05D008478 8.4e-119 431.4 342 67.0
Pp3c13_22210 Physcomitrium patens HOM05D006800 ORTHO05D008478 4.2e-118 429.1 379 58.0
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis HOM05D006800 ORTHO05D008478 9.3e-118 427.9 385 59.2
Mapoly0082s0064 Marchantia polymorpha HOM05D006800 ORTHO05D008478 3.0e-116 422.9 415 53.7
Hma1.2p1_2417F.1_g321760 Hydrangea macrophylla HOM05D006800 ORTHO05D008478 1.1e-115 421.0 295 73.6
FAN16G0832 Fragaria x ananassa HOM05D006800 ORTHO05D008478 1.0e-108 397.9 258 83.3
RcHm_v2.0_Chr5g0034911 Rosa chinensis HOM05D006800 ORTHO05D008478 1.9e-107 393.7 237 87.3
SMO367G0771 Selaginella moellendorffii HOM05D006800 ORTHO05D008478 7.4e-107 391.7 351 58.1
CBR_g19822 Chara braunii HOM05D006800 ORTHO05D008478 3.8e-103 379.4 373 56.3
Rhsim06G0194400 Rhododendron simsii HOM05D006800 ORTHO05D008478 2.1e-101 373.6 405 54.3
Atru.chr2.2798 Acer truncatum HOM05D006800 ORTHO05D008478 4.3e-99 365.9 305 65.9
Lj1A850T65 Lonicera japonica HOM05D006800 ORTHO05D008478 3.1e-97 359.8 254 73.2
Ah.06g183750 Amaranthus hybridus HOM05D006800 ORTHO05D008478 2.6e-96 356.7 321 60.7
Hma1.2p1_1274F.1_g271940 Hydrangea macrophylla HOM05D006800 ORTHO05D008478 4.5e-88 329.3 218 76.6
CARHR090580 Cardamine hirsuta HOM05D006800 ORTHO05D008478 2.0e-80 303.9 307 58.3
CSS0042082 Camellia sinensis var. sinensis HOM05D006800 ORTHO05D008478 1.1e-75 288.1 201 72.6
CSS0014964 Camellia sinensis var. sinensis HOM05D006800 ORTHO05D008478 1.3e-74 284.6 214 71.0
Cre06.g303300 Chlamydomonas reinhardtii HOM05D006800 ORTHO05D008478 1.4e-68 264.6 400 41.8
MCO05G047 Micromonas commoda HOM05D006800 ORTHO05D008478 5.9e-64 249.2 349 44.1
Atru.chr2.2775 Acer truncatum HOM05D006800 ORTHO05D008478 5.2e-52 209.5 250 51.6
Hund10341 Selenicereus undatus HOM05D006800 ORTHO05D008478 1.5e-46 191.4 108 83.3
Atru.chr2.2807 Acer truncatum HOM05D006800 ORTHO05D008478 1.8e-44 184.5 242 49.6
Atru.chr2.2794 Acer truncatum HOM05D006800 ORTHO05D008478 3.1e-36 157.1 103 77.7
SEGI_33645 Sequoiadendron giganteum HOM05D004777 ORTHO05D006240 1.7e-26 124.8 392 26.8
Cre03.g189800 Chlamydomonas reinhardtii HOM05D004777 ORTHO05D006240 9.2e-25 119.0 353 28.0
CBR_g37206 Chara braunii HOM05D004777 ORTHO05D006240 2.7e-24 117.5 335 29.0
TAR622G1080 Trochodendron aralioides HOM05D004777 ORTHO05D006240 1.0e-23 115.5 431 26.2
ATR0730G054 Amborella trichopoda HOM05D004777 ORTHO05D006240 1.3e-23 115.2 358 27.9
Pp3c15_550 Physcomitrium patens HOM05D004777 ORTHO05D006240 3.0e-23 114.0 388 26.5
Gohir.A09G026100 Gossypium hirsutum HOM05D004777 ORTHO05D006240 6.6e-23 112.8 383 27.4
Pp3c26_630 Physcomitrium patens HOM05D004777 ORTHO05D006240 8.6e-23 112.5 355 28.2
Gorai.006G029700 Gossypium raimondii HOM05D004777 ORTHO05D006240 1.1e-22 112.1 397 27.5
Gohir.D09G025500 Gossypium hirsutum HOM05D004777 ORTHO05D006240 1.9e-22 111.3 397 27.5
MCO01G434 Micromonas commoda HOM05D004777 ORTHO05D006240 1.9e-22 111.3 332 30.1
Pp3c9_660 Physcomitrium patens HOM05D004777 ORTHO05D006240 3.3e-22 110.5 421 25.7
Os08g0382400 Oryza sativa ssp. japonica HOM05D004777 ORTHO05D006240 4.3e-22 110.2 371 27.0
VMungo0464G0641 Vigna mungo HOM05D004777 ORTHO05D006240 5.6e-22 109.8 431 25.5
Mapoly0001s0360 Marchantia polymorpha HOM05D004777 ORTHO05D006240 1.2e-21 108.6 335 28.4
Thecc.04G008400 Theobroma cacao HOM05D004777 ORTHO05D006240 2.1e-21 107.8 385 25.2
Glyma.13G169500 Glycine max HOM05D004777 ORTHO05D006240 3.6e-21 107.1 428 25.9
THA.LOC104802404 Tarenaya hassleriana HOM05D004777 ORTHO05D006240 4.7e-21 106.7 361 27.7
AagrBONN_evm.TU.Sc2ySwM_368.1753 Anthoceros agrestis HOM05D004777 ORTHO05D006240 6.2e-21 106.3 381 27.3
Glyma.19G009700 Glycine max HOM05D004777 ORTHO05D006240 8.1e-21 105.9 428 26.2
MELO3C009952.2 Cucumis melo HOM05D004777 ORTHO05D006240 1.4e-20 105.1 361 27.7
ClCG10G014260 Citrullus lanatus HOM05D004777 ORTHO05D006240 2.4e-20 104.4 361 27.4
Hund02275 Selenicereus undatus HOM05D004777 ORTHO05D006240 2.4e-20 104.4 361 27.7
Sed0004879 Sechium edule HOM05D004777 ORTHO05D006240 4.0e-20 103.6 361 27.7
CsaV3_3G042370 Cucumis sativus L. HOM05D004777 ORTHO05D006240 5.2e-20 103.2 361 27.7
RcHm_v2.0_Chr5g0033671 Rosa chinensis HOM05D006800 ORTHO05D008478 5.2e-20 103.2 54 94.4
PRCOL_00001222 Prasinoderma coloniale HOM05D004777 ORTHO05D006240 1.7e-15 88.2 369 23.3
FAN14G0508 Fragaria x ananassa HOM05D000617 ORTHO05D021539 9.3e-09 65.9 36 88.9
SMO146G0026 Selaginella moellendorffii HOM05D004777 ORTHO05D006240 1.2e-08 65.5 263 27.0
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 4.6e-08 63.5 68 54.4
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 6.6e-07 59.7 67 50.7
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 6.6e-07 59.7 67 50.7


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