Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2997 Fragaria x ananassa HOM05D001156 ORTHO05D001006 9.2e-57 223.4 118 100.0
FAN19G1670 Fragaria x ananassa HOM05D001156 ORTHO05D001006 1.7e-39 166.0 88 100.0
FAN11G3550 Fragaria x ananassa HOM05D001156 ORTHO05D009451 6.6e-39 164.1 87 100.0
FAN13G3194 Fragaria x ananassa HOM05D001156 ORTHO05D001006 8.1e-37 157.1 84 98.8
FAN18G0573 Fragaria x ananassa HOM05D001156 ORTHO05D001006 2.3e-36 155.6 84 97.6
FvH4_5g26350 Fragaria vesca HOM05D001156 ORTHO05D001006 3.1e-36 155.2 84 97.6
FAN04G0454 Fragaria x ananassa HOM05D001156 ORTHO05D001006 1.5e-35 152.9 85 95.3
FAN08G3317 Fragaria x ananassa HOM05D001156 ORTHO05D001006 2.6e-35 152.1 85 95.3
RcHm_v2.0_Chr7g0217161 Rosa chinensis HOM05D001156 ORTHO05D001006 1.7e-31 139.4 92 79.3
RcHm_v2.0_Chr7g0217101 Rosa chinensis HOM05D001156 ORTHO05D001006 4.3e-30 134.8 84 84.5
FvH4_2g11030 Fragaria vesca HOM05D001156 ORTHO05D001006 2.3e-23 112.5 94 64.9
RcHm_v2.0_Chr6g0269241 Rosa chinensis HOM05D001156 ORTHO05D001006 3.9e-23 111.7 84 71.4
Prupe.8G053900 Prunus persica HOM05D001156 ORTHO05D001006 8.7e-23 110.5 84 72.6
Prupe.1G195400 Prunus persica HOM05D001156 ORTHO05D001006 1.6e-21 106.3 76 71.1
MD10G1046200 Malus domestica HOM05D001156 ORTHO05D001006 5.3e-20 101.3 76 65.8
FAN15G1597 Fragaria x ananassa HOM05D001156 ORTHO05D001006 4.5e-19 98.2 84 63.1
FAN20G0933 Fragaria x ananassa HOM05D001156 ORTHO05D001006 4.5e-19 98.2 84 64.3
FAN24G2926 Fragaria x ananassa HOM05D001156 ORTHO05D001006 7.6e-19 97.4 84 63.1
MD04G1041700 Malus domestica HOM05D001156 ORTHO05D001006 2.2e-18 95.9 77 68.8
Gorai.011G108200 Gossypium raimondii HOM05D001156 ORTHO05D001006 5.6e-14 81.3 87 49.4
Duzib264G0887 Durio zibethinus HOM05D001156 ORTHO05D001006 1.3e-13 80.1 85 52.9
Gohir.A10G089600 Gossypium hirsutum HOM05D001156 ORTHO05D001006 1.3e-13 80.1 87 48.3
Cc07_g07140 Coffea canephora HOM05D003298 ORTHO05D003827 1.6e-13 79.7 79 58.2
Dinv26936 Davidia involucrata HOM05D001156 ORTHO05D001006 1.6e-13 79.7 62 59.7
Thecc.01G073200 Theobroma cacao HOM05D001156 ORTHO05D001006 3.7e-13 78.6 99 46.5
Haze_15278 Corylus avellana HOM05D001156 ORTHO05D001006 6.2e-13 77.8 90 50.0
Duzib187G1810 Durio zibethinus HOM05D001156 ORTHO05D001006 6.2e-13 77.8 99 46.5
Nn5g30607 Nelumbo nucifera HOM05D001156 ORTHO05D001006 1.1e-12 77.0 90 50.0
CAN.G1075.42 Capsicum annuum HOM05D001156 ORTHO05D001006 1.8e-12 76.3 78 56.4
Cfa004136 Carpinus fangiana HOM05D001156 ORTHO05D001006 1.8e-12 76.3 89 44.9
CANSAT01G1841 Cannabis sativa HOM05D001156 ORTHO05D001006 2.4e-12 75.9 100 52.0
PGSC0003DMG400021441 Solanum tuberosum HOM05D001156 ORTHO05D001006 2.4e-12 75.9 96 52.1
Lsat_1_v5_gn_4_161541 Lactuca sativa HOM05D001156 ORTHO05D001006 5.3e-12 74.7 79 53.2
CiPaw.01G004300 Carya illinoinensis HOM05D001156 ORTHO05D001006 9.0e-12 73.9 76 50.0
COL.COLO4_11582 Corchorus olitorius HOM05D001156 ORTHO05D001006 9.0e-12 73.9 64 60.9
PGR102G1158 Punica granatum HOM05D001156 ORTHO05D001006 1.2e-11 73.6 71 56.3
QL06p039532 Quercus lobata HOM05D001156 ORTHO05D001006 1.5e-11 73.2 71 53.5
Cpa.g.sc6.11 Carica papaya HOM05D001156 ORTHO05D001006 2.0e-11 72.8 57 64.9
ClCG01G017620 Citrullus lanatus HOM05D001156 ORTHO05D001006 2.0e-11 72.8 62 61.3
Gohir.D10G098500 Gossypium hirsutum HOM05D001156 ORTHO05D001006 2.0e-11 72.8 66 53.0
Dinv04043 Davidia involucrata HOM05D001156 ORTHO05D001006 2.6e-11 72.4 100 47.0
TAR376G0630 Trochodendron aralioides HOM05D001156 ORTHO05D001006 2.6e-11 72.4 71 52.1
Sed0013334 Sechium edule HOM05D001156 ORTHO05D001006 5.8e-11 71.2 67 58.2
Nitab4.5_0004025g0030 Nicotiana tabacum HOM05D001156 ORTHO05D001006 7.6e-11 70.9 90 45.6
ECA232G2449 Erigeron canadensis HOM05D001156 ORTHO05D001006 1.3e-10 70.1 85 47.1
Eucgr.H02311 Eucalyptus grandis HOM05D001156 ORTHO05D001006 1.3e-10 70.1 56 57.1
unitig_32.g10997 Utricularia gibba HOM05D001156 ORTHO05D001006 1.3e-10 70.1 76 53.9
CSS0002792 Camellia sinensis var. sinensis HOM05D001156 ORTHO05D001006 1.7e-10 69.7 66 51.5
TWI59G0342 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 1.7e-10 69.7 93 45.2
CsaV3_6G044160 Cucumis sativus L. HOM05D001156 ORTHO05D001006 2.2e-10 69.3 57 61.4
MBI02_g37836_MAGBIO Magnolia biondii HOM05D001156 ORTHO05D001006 2.9e-10 68.9 48 62.5
Duzib147G0140 Durio zibethinus HOM05D001156 ORTHO05D001006 3.8e-10 68.6 52 57.7
Hma1.2p1_0852F.1_g228590 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 4.9e-10 68.2 80 47.5
Solyc02g092300.1 Solanum lycopersicum HOM05D001156 ORTHO05D001006 4.9e-10 68.2 76 53.9
Sopen02g036870 Solanum pennellii HOM05D001156 ORTHO05D001006 4.9e-10 68.2 76 53.9
Aqoxy6G01412 Aquilegia oxysepala HOM05D001156 ORTHO05D001006 1.1e-09 67.0 77 46.8
Manes.13G111200 Manihot esculenta HOM05D001156 ORTHO05D001006 1.4e-09 66.6 79 50.6
ATR0739G148 Amborella trichopoda HOM05D001156 ORTHO05D001006 1.9e-09 66.2 77 45.5
Atru.chr3.1019 Acer truncatum HOM05D001156 ORTHO05D001006 2.4e-09 65.9 77 46.8
Rhsim08G0093100 Rhododendron simsii HOM05D001156 ORTHO05D001006 2.4e-09 65.9 56 60.7
Sabra02G0052400 Salix brachista HOM05D000062 ORTHO05D012443 2.4e-09 65.9 93 44.1
Sabra19G0090100 Salix brachista HOM05D000062 ORTHO05D012443 2.4e-09 65.9 93 44.1
Sabra19G0090300 Salix brachista HOM05D000062 ORTHO05D012443 2.4e-09 65.9 93 44.1
Migut.H00300 Erythranthe guttata HOM05D001156 ORTHO05D001006 4.2e-09 65.1 72 50.0
ATR0739G108 Amborella trichopoda HOM05D001156 ORTHO05D001006 5.5e-09 64.7 69 50.7
MELO3C007639.2 Cucumis melo HOM05D001156 ORTHO05D001006 5.5e-09 64.7 57 57.9
Nitab4.5_0000142g0110 Nicotiana tabacum HOM05D001156 ORTHO05D001006 5.5e-09 64.7 47 61.7
BcaNung02079 Brassica carinata HOM05D001114 ORTHO05D002792 7.1e-09 64.3 74 47.3
Oeu032424.1 Olea europaea HOM05D001156 ORTHO05D001006 1.6e-08 63.2 71 50.7
BcaNung02075 Brassica carinata HOM05D001156 ORTHO05D001006 2.7e-08 62.4 89 42.7
PSO832G3715 Papaver somniferum HOM05D001156 ORTHO05D001006 2.7e-08 62.4 46 58.7
DCAR_025801 Daucus carota HOM05D001156 ORTHO05D001006 1.0e-07 60.5 57 49.1
PSO063G4759 Papaver somniferum HOM05D001156 ORTHO05D001006 1.0e-07 60.5 52 50.0
Potri.004G224300 Populus trichocarpa HOM05D001156 ORTHO05D001006 1.0e-07 60.5 96 44.8
A03p65440 Brassica napus HOM05D001156 ORTHO05D001006 1.3e-07 60.1 68 48.5
BraA03t15596Z Brassica rapa HOM05D001156 ORTHO05D001006 1.3e-07 60.1 68 48.5
TAR627G0190 Trochodendron aralioides HOM05D001156 ORTHO05D001006 1.8e-07 59.7 98 39.8
BcaNung02077 Brassica carinata HOM05D001156 ORTHO05D002792 2.3e-07 59.3 71 47.9
BolC1t00148H Brassica oleracea HOM05D001156 ORTHO05D001006 2.3e-07 59.3 73 45.2
HanXRQChr14g0445281 Helianthus annuus HOM05D001156 ORTHO05D001006 2.3e-07 59.3 90 38.9
Carub.0007s0261 Capsella rubella HOM05D001156 ORTHO05D001006 3.0e-07 58.9 68 45.6
TAR627G0865 Trochodendron aralioides HOM05D001156 ORTHO05D001006 3.9e-07 58.5 98 39.8
SGA_v2.0_scaffold72G24071 Striga asiatica HOM05D001156 ORTHO05D001006 5.1e-07 58.2 62 50.0
BcaNung02072 Brassica carinata HOM05D001156 ORTHO05D001006 6.7e-07 57.8 89 44.9
C07p62540 Brassica napus HOM05D001156 ORTHO05D001006 6.7e-07 57.8 89 44.9
BolC7t46669H Brassica oleracea HOM05D001156 ORTHO05D001006 6.7e-07 57.8 89 44.9
Ciclev10026634m.g Citrus clementina HOM05D001156 ORTHO05D001006 6.7e-07 57.8 75 42.7
Thhalv10026420m.g Eutrema salsugineum HOM05D001156 ORTHO05D001006 6.7e-07 57.8 68 48.5
Sp7g35310 Schrenkiella parvula HOM05D001156 ORTHO05D001006 6.7e-07 57.8 68 47.1
Phvul.006G021600 Phaseolus vulgaris HOM05D001156 ORTHO05D001006 1.1e-06 57.0 81 35.8
AL7G13110 Arabidopsis lyrata HOM05D001156 ORTHO05D001006 1.5e-06 56.6 59 49.2
BcaB03g12335 Brassica carinata HOM05D001156 ORTHO05D001006 1.9e-06 56.2 92 38.0
Psat1g164400 Pisum sativum HOM05D001156 ORTHO05D001006 2.5e-06 55.8 68 44.1
A08p22720 Brassica napus HOM05D001156 ORTHO05D001006 3.3e-06 55.5 68 44.1
BraA08t34241Z Brassica rapa HOM05D001156 ORTHO05D001006 3.3e-06 55.5 68 44.1
Glyma.13G077100 Glycine max HOM05D001156 ORTHO05D001006 3.3e-06 55.5 90 37.8
DCAR_030083 Daucus carota HOM05D001156 ORTHO05D001006 5.6e-06 54.7 88 37.5
Aa31LG6G14560 Aethionema arabicum HOM05D001156 ORTHO05D001006 7.4e-06 54.3 77 44.2
AT4G37660 Arabidopsis thaliana HOM05D001156 ORTHO05D001006 7.4e-06 54.3 68 45.6
Lj6g0004694 Lotus japonicus HOM05D001156 ORTHO05D001006 7.4e-06 54.3 71 38.0
BcaC01g00394 Brassica carinata HOM05D001156 ORTHO05D001006 9.6e-06 53.9 68 44.1
C01p01510 Brassica napus HOM05D001156 ORTHO05D001006 9.6e-06 53.9 74 43.2
BolC3t20167H Brassica oleracea HOM05D001156 ORTHO05D001006 9.6e-06 53.9 68 44.1
HPP92_027258 Vanilla planifolia HOM05D001156 ORTHO05D001006 9.6e-06 53.9 46 50.0


User provided reference genes

Program Settings