Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.9e-277 956.8 459 100.0
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.1e-238 827.8 459 85.8
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 7.1e-238 827.0 459 85.8
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.6e-235 817.4 455 85.3
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.6e-211 736.9 443 80.4
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 5.0e-159 565.1 334 80.2
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 2.9e-106 389.8 452 51.3
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.3e-105 384.8 465 49.0
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.5e-102 376.7 414 51.0
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.8e-101 373.2 457 49.2
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.2e-96 357.8 455 47.9
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 5.6e-94 349.0 457 48.4
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 9.0e-92 341.7 433 46.4
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.7e-90 337.4 450 45.3
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.4e-89 334.3 440 46.1
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 3.2e-89 333.2 461 43.2
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 4.2e-89 332.8 459 44.7
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 3.5e-88 329.7 443 46.0
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 4.6e-88 329.3 455 44.8
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 7.9e-88 328.6 449 43.9
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 7.9e-88 328.6 448 44.2
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 1.0e-87 328.2 439 45.6
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 1.1e-86 324.7 446 44.8
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.9e-86 323.9 459 43.8
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.9e-86 323.9 452 44.0
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 4.3e-86 322.8 459 43.4
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.1e-84 316.6 459 42.0
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 3.1e-84 316.6 459 41.0
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 4.0e-84 316.2 436 44.3
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.0e-83 313.9 436 44.5
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 4.5e-83 312.8 446 43.9
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 1.7e-82 310.8 449 43.4
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 5.5e-81 305.8 460 42.4
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.8e-79 300.8 430 43.5
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 6.7e-79 298.9 448 40.2
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 8.7e-79 298.5 448 40.2
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 8.7e-79 298.5 448 40.4
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 8.7e-79 298.5 452 41.6
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.1e-78 298.1 432 42.1
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 1.1e-78 298.1 444 41.7
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.5e-78 297.7 445 40.4
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 3.3e-78 296.6 367 49.0
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 1.3e-77 294.7 444 40.8
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.6e-77 294.3 453 40.8
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 1.6e-77 294.3 451 41.7
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.2e-77 293.9 449 40.3
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 2.8e-77 293.5 444 42.6
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 2.8e-77 293.5 464 42.5
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 3.7e-77 293.1 329 52.9
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 3.7e-77 293.1 432 43.8
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 3.7e-77 293.1 458 41.3
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.1e-76 291.6 450 40.0
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.1e-76 291.6 455 41.3
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 1.8e-76 290.8 471 40.8
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 4.1e-76 289.7 449 41.0
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 6.9e-76 288.9 462 38.3
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 9.0e-76 288.5 438 42.2
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.2e-75 288.1 453 41.3
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.5e-75 287.7 490 39.0
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 2.0e-75 287.3 449 39.4
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 2.6e-75 287.0 465 41.5
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 3.4e-75 286.6 442 41.6
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.4e-75 286.6 440 43.2
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 7.6e-75 285.4 446 38.1
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 3.8e-74 283.1 467 38.8
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 6.5e-74 282.3 459 40.7
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 8.5e-74 282.0 459 39.9
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 1.1e-73 281.6 393 43.5
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.4e-73 281.2 452 39.6
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.4e-73 281.2 453 40.4
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 1.9e-73 280.8 437 41.9
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 4.2e-73 279.6 437 41.4
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 4.2e-73 279.6 437 41.4
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 1.2e-72 278.1 467 38.5
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 3.9e-71 273.1 434 40.3
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 3.3e-70 270.0 531 33.3
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.3e-70 270.0 361 44.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.3e-69 268.1 486 38.5
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 2.8e-69 266.9 438 39.5
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 4.8e-69 266.2 451 38.4
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 3.1e-68 263.5 445 38.4
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 9.1e-68 261.9 436 37.8
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.7e-66 257.7 402 41.8
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 1.2e-64 251.5 441 39.2
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 2.1e-64 250.8 440 38.6
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.4e-63 248.1 319 47.0
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 8.8e-63 245.4 438 36.5
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.3e-61 241.5 436 35.3
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 1.1e-60 238.4 367 43.9
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 3.1e-60 236.9 469 38.2
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.1e-60 235.3 123 90.2
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 5.5e-57 226.1 370 42.2
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 1.3e-53 214.9 234 51.3
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-53 214.9 234 51.3
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 6.3e-53 212.6 451 33.9
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 2.3e-47 194.1 245 45.7
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 2.3e-47 194.1 335 37.9
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 3.1e-44 183.7 255 47.8
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.5e-43 180.3 309 42.7
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 1.7e-42 177.9 270 41.5
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 5.7e-38 162.9 464 27.6
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 8.3e-37 159.1 300 37.0
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 1.0e-34 152.1 421 27.1
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 2.5e-33 147.5 240 40.4
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 2.5e-33 147.5 431 31.8
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.2e-32 145.2 240 40.8
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 2.8e-32 144.1 393 32.3
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 1.4e-31 141.7 393 32.1
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 2.3e-31 141.0 239 43.1
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.3e-29 135.2 204 41.7
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 4.1e-28 130.2 158 43.0
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 1.0e-26 125.6 219 43.4
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.3e-25 120.6 158 39.9
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.3e-25 119.4 139 51.1
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 2.3e-23 114.4 170 41.2
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 4.0e-23 113.6 199 35.7
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 6.8e-23 112.8 360 28.9
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 4.1e-20 103.6 130 42.3
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 5.4e-20 103.2 274 30.3
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 1.2e-19 102.1 150 41.3
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 6.0e-19 99.8 366 26.8
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 5.6e-17 93.2 92 53.3
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 5.6e-17 93.2 108 49.1
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 4.0e-15 87.0 109 43.1
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.5e-14 85.1 124 37.1
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 2.3e-10 71.2 85 45.9
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.6e-10 69.7 69 52.2
FAN24G2079 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.5e-09 65.9 71 50.7
FvH4_2g17920 Fragaria vesca HOM05D002214 ORTHO05D045595 2.3e-07 61.2 97 41.2


User provided reference genes

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