Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2472 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.4e-110 402.9 196 100.0
FAN26G1235 Fragaria x ananassa HOM05D000514 ORTHO05D000222 4.7e-50 201.8 162 68.5
FAN07G0263 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.6e-45 186.8 162 63.6
FAN02G3225 Fragaria x ananassa HOM05D000514 ORTHO05D000222 4.6e-37 158.7 152 56.6
FAN10G2973 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.5e-35 152.9 119 65.5
FAN10G3567 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.5e-35 152.9 119 65.5
FAN02G1515 Fragaria x ananassa HOM05D002273 ORTHO05D000818 9.6e-35 151.0 119 65.5
FAN26G2395 Fragaria x ananassa HOM05D002273 ORTHO05D000818 9.6e-35 151.0 119 66.4
FAN22G1610 Fragaria x ananassa HOM05D000514 ORTHO05D000818 2.1e-34 149.8 119 64.7
FAN05G0817 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.8e-34 149.4 119 63.0
FAN01G0572 Fragaria x ananassa HOM05D002273 ORTHO05D000818 8.1e-34 147.9 119 63.9
FAN03G1125 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.8e-33 146.7 119 63.9
FAN15G1613 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.8e-33 146.7 185 48.6
FAN02G0662 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.4e-33 146.4 113 64.6
FAN06G2377 Fragaria x ananassa HOM05D002273 ORTHO05D000818 3.1e-33 146.0 120 64.2
RcHm_v2.0_Chr1g0363161 Rosa chinensis HOM05D002273 ORTHO05D000818 1.5e-32 143.7 110 67.3
FvH4_5g24920 Fragaria vesca HOM05D002273 ORTHO05D000818 1.7e-31 140.2 111 65.8
FvH4_7g19290 Fragaria vesca HOM05D002273 ORTHO05D000818 2.2e-31 139.8 110 67.3
FAN07G2815 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.1e-30 137.5 119 62.2
FAN21G1445 Fragaria x ananassa HOM05D002273 ORTHO05D000818 3.5e-29 132.5 111 63.1
FAN26G3059 Fragaria x ananassa HOM05D002273 ORTHO05D000818 4.6e-29 132.1 105 66.7
FAN21G1655 Fragaria x ananassa HOM05D002273 ORTHO05D000818 3.0e-28 129.4 106 62.3
FAN21G3370 Fragaria x ananassa HOM05D002273 ORTHO05D000818 8.7e-28 127.9 102 63.7
FAN22G0528 Fragaria x ananassa HOM05D002273 ORTHO05D008963 1.1e-27 127.5 111 62.2
FAN23G2564 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.8e-26 122.9 89 73.0
FAN15G0207 Fragaria x ananassa HOM05D002273 ORTHO05D000818 8.2e-26 121.3 135 57.8
FAN02G2233 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.1e-25 120.9 119 56.3
FAN21G1088 Fragaria x ananassa HOM05D007789 ORTHO05D008963 5.8e-24 115.2 95 66.3
FAN22G1927 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.0e-23 114.4 95 65.3
FAN04G1634 Fragaria x ananassa HOM05D002273 ORTHO05D000818 6.7e-20 101.7 60 81.7
FAN21G3061 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.2e-18 96.7 195 36.4
FAN21G2687 Fragaria x ananassa HOM05D000514 ORTHO05D000222 8.2e-18 94.7 195 35.9
FAN22G1310 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.6e-16 89.7 99 53.5
RcHm_v2.0_Chr1g0363141 Rosa chinensis HOM05D002273 ORTHO05D000818 1.3e-15 87.4 102 46.1
Prupe.2G212400 Prunus persica HOM05D002273 ORTHO05D000818 8.5e-15 84.7 101 44.6
FAN23G0636 Fragaria x ananassa HOM05D002273 ORTHO05D000818 5.5e-14 82.0 108 39.8
FAN03G0826 Fragaria x ananassa HOM05D002273 ORTHO05D000818 9.4e-14 81.3 100 43.0
FAN07G0910 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.6e-13 80.5 107 43.0
FvH4_4g13890 Fragaria vesca HOM05D002273 ORTHO05D000818 2.7e-13 79.7 107 43.0
FAN12G1031 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.7e-13 79.7 107 43.0
FvH4_7g19272 Fragaria vesca HOM05D002273 ORTHO05D000818 3.6e-13 79.3 104 39.4
FAN10G1670 Fragaria x ananassa HOM05D002273 ORTHO05D000818 4.6e-13 79.0 125 39.2
MD07G1173200 Malus domestica HOM05D002273 ORTHO05D000818 6.1e-13 78.6 101 35.6
RcHm_v2.0_Chr4g0415011 Rosa chinensis HOM05D002273 ORTHO05D000818 6.1e-13 78.6 104 45.2
FAN06G4436 Fragaria x ananassa HOM05D002273 ORTHO05D000818 3.9e-12 75.9 99 41.4
RcHm_v2.0_Chr1g0363121 Rosa chinensis HOM05D002273 ORTHO05D000818 1.5e-11 73.9 106 40.6
FAN03G1196 Fragaria x ananassa HOM05D000514 ORTHO05D000222 7.4e-11 71.6 168 35.7
RcHm_v2.0_Chr1g0363131 Rosa chinensis HOM05D002273 ORTHO05D000818 7.4e-11 71.6 101 37.6
FAN28G1576 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.3e-10 70.9 40 77.5
FAN03G1740 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.7e-10 70.5 100 38.0
Prupe.1G157300 Prunus persica HOM05D002273 ORTHO05D000818 2.2e-10 70.1 105 41.0
Prupe.1G157400 Prunus persica HOM05D002273 ORTHO05D000818 4.8e-10 68.9 101 39.6
Prupe.1G012700 Prunus persica HOM05D002273 ORTHO05D000818 6.3e-10 68.6 100 42.0
FAN02G1455 Fragaria x ananassa HOM05D002273 ORTHO05D000818 8.2e-10 68.2 112 38.4
Prupe.1G157500 Prunus persica HOM05D002273 ORTHO05D000818 8.2e-10 68.2 102 37.3
FvH4_4g13862 Fragaria vesca HOM05D002273 ORTHO05D000818 1.4e-09 67.4 102 37.3
FAN07G1205 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.4e-09 67.4 102 37.3
FvH4_4g13771 Fragaria vesca HOM05D002273 ORTHO05D000818 1.8e-09 67.0 101 38.6
RcHm_v2.0_Chr4g0414631 Rosa chinensis HOM05D002273 ORTHO05D000818 1.8e-09 67.0 103 41.7
DCAR_014540 Daucus carota HOM05D002273 ORTHO05D000818 2.4e-09 66.6 95 37.9
Duzib114G0913 Durio zibethinus HOM05D002273 ORTHO05D000818 3.1e-09 66.2 100 36.0
FAN05G1262 Fragaria x ananassa HOM05D002273 ORTHO05D000818 4.1e-09 65.9 112 37.5
FAN21G1597 Fragaria x ananassa HOM05D011613 ORTHO05D000818 4.1e-09 65.9 95 40.0
FvH4_3g12570 Fragaria vesca HOM05D002273 ORTHO05D000818 5.3e-09 65.5 95 40.0
FAN14G2176 Fragaria x ananassa HOM05D002273 ORTHO05D000818 5.3e-09 65.5 95 40.0
FAN25G0350 Fragaria x ananassa HOM05D002273 ORTHO05D000818 5.3e-09 65.5 95 40.0
Prupe.6G053000 Prunus persica HOM05D002273 ORTHO05D000818 5.3e-09 65.5 97 40.2
DCAR_027684 Daucus carota HOM05D002273 ORTHO05D000818 6.9e-09 65.1 97 34.0
FAN12G1649 Fragaria x ananassa HOM05D002747 ORTHO05D003069 9.1e-09 64.7 101 37.6
FvH4_7g19271 Fragaria vesca HOM05D002273 ORTHO05D000818 1.5e-08 63.9 83 44.6
Prupe.1G012400 Prunus persica HOM05D002273 ORTHO05D000818 1.5e-08 63.9 102 40.2
MD04G1010000 Malus domestica HOM05D002273 ORTHO05D000818 2.6e-08 63.2 99 39.4
Prupe.1G012600 Prunus persica HOM05D002273 ORTHO05D000818 2.6e-08 63.2 103 39.8
vmacro08618 Vaccinium macrocarpon HOM05D002273 ORTHO05D000818 2.6e-08 63.2 99 37.4
Prupe.1G158200 Prunus persica HOM05D002273 ORTHO05D000818 3.4e-08 62.8 101 39.6
RcHm_v2.0_Chr4g0415031 Rosa chinensis HOM05D002273 ORTHO05D000818 4.5e-08 62.4 99 35.4
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 5.9e-08 62.0 104 37.5
FAN08G2117 Fragaria x ananassa HOM05D000514 ORTHO05D000222 7.7e-08 61.6 37 73.0
FAN22G1558 Fragaria x ananassa HOM05D002273 ORTHO05D000818 7.7e-08 61.6 99 37.4
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 1.0e-07 61.2 104 36.5
Actinidia27496 Actinidia chinensis HOM05D002273 ORTHO05D000818 1.3e-07 60.8 102 38.2
CSS0003272 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 1.3e-07 60.8 104 36.5
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.3e-07 60.8 104 36.5
FAN17G0544 Fragaria x ananassa HOM05D002273 ORTHO05D000818 1.3e-07 60.8 41 63.4
CSS0050412 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 1.7e-07 60.5 104 36.5
Dinv27227 Davidia involucrata HOM05D002273 ORTHO05D000818 1.7e-07 60.5 101 35.6
FvH4_4g13901 Fragaria vesca HOM05D002273 ORTHO05D000818 1.7e-07 60.5 99 34.3
FAN12G3039 Fragaria x ananassa HOM05D000140 ORTHO05D000087 1.7e-07 60.5 99 34.3
FAN07G2327 Fragaria x ananassa HOM05D000140 ORTHO05D000087 2.2e-07 60.1 99 38.4
FAN15G2793 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.2e-07 60.1 65 49.2
Hma1.2p1_2122F.1_g314510 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 2.9e-07 59.7 104 37.5
Actinidia35859 Actinidia chinensis HOM05D002273 ORTHO05D000818 5.0e-07 58.9 102 39.2
Aqoxy6G01827 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 5.0e-07 58.9 102 36.3
Hma1.2p1_1223F.1_g268330 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 5.0e-07 58.9 104 36.5
CSS0048802 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 6.5e-07 58.5 103 35.9
DCAR_027683 Daucus carota HOM05D002273 ORTHO05D000818 6.5e-07 58.5 103 34.0
Dinv25029 Davidia involucrata HOM05D002273 ORTHO05D000818 1.1e-06 57.8 101 35.6
FvH4_6g07650 Fragaria vesca HOM05D002273 ORTHO05D000818 1.1e-06 57.8 69 47.8
GSVIVG01037129001 Vitis vinifera HOM05D002273 ORTHO05D000818 1.1e-06 57.8 104 32.7
GSVIVG01037123001 Vitis vinifera HOM05D002273 ORTHO05D000818 1.4e-06 57.4 101 29.7
FAN16G1476 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.5e-06 56.6 66 48.5
FAN22G1946 Fragaria x ananassa HOM05D002273 ORTHO05D000818 2.5e-06 56.6 102 33.3
Prupe.1G009600 Prunus persica HOM05D002273 ORTHO05D000818 3.2e-06 56.2 82 46.3
HPP92_019492 Vanilla planifolia HOM05D002273 ORTHO05D000818 3.2e-06 56.2 96 32.3
Hma1.2p1_0383F.1_g140320 Hydrangea macrophylla HOM05D002273 ORTHO05D000818 4.2e-06 55.8 102 35.3
GSVIVG01037125001 Vitis vinifera HOM05D000012 ORTHO05D003625 4.2e-06 55.8 105 31.4
CSS0000286 Camellia sinensis var. sinensis HOM05D002273 ORTHO05D000818 5.5e-06 55.5 100 35.0
GSVIVG01005600001 Vitis vinifera HOM05D002273 ORTHO05D000818 5.5e-06 55.5 104 33.7
Prupe.1G158000 Prunus persica HOM05D002273 ORTHO05D000818 9.4e-06 54.7 99 34.3
RcHm_v2.0_Chr3g0459831 Rosa chinensis HOM05D002273 ORTHO05D000818 9.4e-06 54.7 100 35.0


User provided reference genes

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