Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1307 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.2e-22 109.0 58 100.0
RcHm_v2.0_Chr6g0275831 Rosa chinensis HOM05D005180 ORTHO05D006136 2.4e-18 94.7 57 89.5
FvH4_2g13990 Fragaria vesca HOM05D005180 ORTHO05D006136 1.2e-17 92.4 57 87.7
FAN15G0398 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.2e-17 92.4 57 87.7
FAN20G0932 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.2e-17 92.4 57 87.7
FAN24G0415 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.2e-17 92.4 57 87.7
FAN27G2246 Fragaria x ananassa HOM05D005180 ORTHO05D006136 2.0e-17 91.7 57 87.7
FvH4_4g00100 Fragaria vesca HOM05D005180 ORTHO05D006136 1.3e-16 89.0 57 86.0
MD10G1023900 Malus domestica HOM05D005180 ORTHO05D006136 5.0e-16 87.0 57 82.5
Prupe.8G027400 Prunus persica HOM05D005180 ORTHO05D006136 3.3e-15 84.3 57 80.7
FAN23G2223 Fragaria x ananassa HOM05D001255 ORTHO05D006136 4.7e-14 80.5 49 89.8
MD05G1022700 Malus domestica HOM05D005180 ORTHO05D006136 2.3e-13 78.2 56 75.0
MD05G1023000 Malus domestica HOM05D005180 ORTHO05D006136 7.5e-12 73.2 57 73.7
Sabra13G0072900 Salix brachista HOM05D005180 ORTHO05D006136 6.4e-11 70.1 62 66.1
FAN23G1155 Fragaria x ananassa HOM05D001255 ORTHO05D011996 2.4e-10 68.2 55 74.5
Potri.013G080200 Populus trichocarpa HOM05D005180 ORTHO05D006136 3.2e-10 67.8 62 64.5
Lalb_Chr20g0121321 Lupinus albus HOM05D005180 ORTHO05D006136 5.4e-10 67.0 62 64.5
Aqoxy5G01637 Aquilegia oxysepala HOM05D005180 ORTHO05D006136 7.1e-10 66.6 62 66.1
vmacro07270 Vaccinium macrocarpon HOM05D005180 ORTHO05D006136 7.1e-10 66.6 62 67.7
CsaV3_2G036420 Cucumis sativus L. HOM05D005180 ORTHO05D006136 1.6e-09 65.5 62 64.5
Prupe.8G026900 Prunus persica HOM05D005180 ORTHO05D006136 2.1e-09 65.1 41 85.4
MELO3C021887.2 Cucumis melo HOM05D005180 ORTHO05D006136 3.5e-09 64.3 62 62.9
FAN20G1163 Fragaria x ananassa HOM05D001255 ORTHO05D006136 3.5e-09 64.3 41 80.5
HanXRQChr01g0020751 Helianthus annuus HOM05D005180 ORTHO05D006136 1.7e-08 62.0 64 60.9
AUR62005241 Chenopodium quinoa HOM05D005180 ORTHO05D006136 2.3e-08 61.6 63 57.1
Ciclev10021949m.g Citrus clementina HOM05D005180 ORTHO05D006136 5.1e-08 60.5 61 62.3
ECA240G0118 Erigeron canadensis HOM05D005180 ORTHO05D006136 5.1e-08 60.5 62 59.7
AUR62000723 Chenopodium quinoa HOM05D005180 ORTHO05D006136 6.6e-08 60.1 63 55.6
Sc24g0001580 Simmondsia chinensis HOM05D005180 ORTHO05D006136 6.6e-08 60.1 62 61.3
Sed0003176 Sechium edule HOM05D005180 ORTHO05D006136 8.6e-08 59.7 62 58.1
Lsat_1_v5_gn_1_93761 Lactuca sativa HOM05D005180 ORTHO05D006136 1.1e-07 59.3 68 60.3
Nitab4.5_0000428g0030 Nicotiana tabacum HOM05D005180 ORTHO05D006136 1.1e-07 59.3 63 58.7
Ah.04g161260 Amaranthus hybridus HOM05D005180 ORTHO05D006136 1.5e-07 58.9 62 53.2
Sp3g02010 Schrenkiella parvula HOM05D005180 ORTHO05D006136 1.5e-07 58.9 57 61.4
CARHR196370 Cardamine hirsuta HOM05D005180 ORTHO05D006136 1.9e-07 58.5 57 56.1
AL3G12410 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 3.3e-07 57.8 57 61.4
Carub.0003s0208 Capsella rubella HOM05D005180 ORTHO05D006136 3.3e-07 57.8 57 59.6
Thhalv10021437m.g Eutrema salsugineum HOM05D005180 ORTHO05D006136 3.3e-07 57.8 57 59.6
PGR004G2116 Punica granatum HOM05D005180 ORTHO05D006136 5.6e-07 57.0 53 64.2
AT3G02950 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 7.3e-07 56.6 57 57.9
CARHR076980 Cardamine hirsuta HOM05D005180 ORTHO05D006136 9.5e-07 56.2 57 57.9
PSO063G1868 Papaver somniferum HOM05D005180 ORTHO05D006136 9.5e-07 56.2 54 63.0
PGSC0003DMG400022705 Solanum tuberosum HOM05D005180 ORTHO05D006136 9.5e-07 56.2 63 57.1
CAN.G714.6 Capsicum annuum HOM05D005180 ORTHO05D006136 2.1e-06 55.1 63 57.1
Nitab4.5_0002915g0060 Nicotiana tabacum HOM05D005180 ORTHO05D006136 2.1e-06 55.1 63 55.6
AL6G27810 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 2.8e-06 54.7 51 58.8
AT5G16790 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 2.8e-06 54.7 51 58.8
C05p63850 Brassica napus HOM05D005180 ORTHO05D006136 2.8e-06 54.7 57 57.9
BolC5t35050H Brassica oleracea HOM05D005180 ORTHO05D006136 2.8e-06 54.7 57 57.9
Nitab4.5_0002161g0010 Nicotiana tabacum HOM05D005180 ORTHO05D006136 4.7e-06 53.9 63 55.6
unitig_62.g23868 Utricularia gibba HOM05D005180 ORTHO05D006136 4.7e-06 53.9 63 52.4
unitig_64.g29770 Utricularia gibba HOM05D005180 ORTHO05D006136 4.7e-06 53.9 63 52.4
ClCG09G016930 Citrullus lanatus HOM05D005180 ORTHO05D006136 6.2e-06 53.5 62 56.5
Solyc11g072180.3 Solanum lycopersicum HOM05D005180 ORTHO05D006136 6.2e-06 53.5 63 55.6


User provided reference genes

Program Settings