Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G2125 Fragaria x ananassa HOM05D002236 ORTHO05D204452 5.9e-138 494.2 250 100.0
FAN17G2485 Fragaria x ananassa HOM05D002236 ORTHO05D002341 1.3e-31 141.0 126 68.3
arahy.Tifrunner.gnm1.ann1.JMY4T5 Arachis hypogaea HOM05D002236 ORTHO05D002341 5.4e-14 82.4 122 45.9
FvH4_3g34190 Fragaria vesca HOM05D002236 ORTHO05D002341 7.0e-14 82.0 128 43.0
Dinv32807 Davidia involucrata HOM05D002236 ORTHO05D002341 9.1e-14 81.6 128 44.5
FvH4_3g33730 Fragaria vesca HOM05D002236 ORTHO05D002341 1.6e-13 80.9 119 46.2
GSVIVG01025114001 Vitis vinifera HOM05D002236 ORTHO05D002341 2.0e-13 80.5 130 44.6
CSS0008713 Camellia sinensis var. sinensis HOM05D002236 ORTHO05D002341 3.5e-13 79.7 122 41.8
CARHR150000 Cardamine hirsuta HOM05D002236 ORTHO05D002341 4.5e-13 79.3 128 42.2
Medtr2g093200 Medicago truncatula HOM05D002236 ORTHO05D002341 7.7e-13 78.6 118 47.5
Solyc11g072540.3 Solanum lycopersicum HOM05D002236 ORTHO05D002341 7.7e-13 78.6 122 41.0
Sopen11g030190 Solanum pennellii HOM05D002236 ORTHO05D002341 7.7e-13 78.6 122 41.0
PGSC0003DMG400025376 Solanum tuberosum HOM05D002236 ORTHO05D002341 7.7e-13 78.6 122 41.0
TAR623G1208 Trochodendron aralioides HOM05D002236 ORTHO05D002341 7.7e-13 78.6 123 46.3
Aqoxy4G03190 Aquilegia oxysepala HOM05D002236 ORTHO05D002341 1.3e-12 77.8 150 40.7
Carub.0005s1147 Capsella rubella HOM05D002236 ORTHO05D002341 1.3e-12 77.8 128 42.2
Glyma.15G044600 Glycine max HOM05D002236 ORTHO05D002341 1.3e-12 77.8 135 43.0
Cc01_g11710 Coffea canephora HOM05D002236 ORTHO05D002341 1.7e-12 77.4 132 37.9
Psat5g276880 Pisum sativum HOM05D002236 ORTHO05D002341 2.3e-12 77.0 120 44.2
Atru.chr3.3721 Acer truncatum HOM05D002236 ORTHO05D002341 2.9e-12 76.6 128 43.0
Ca_01443_v3 Cicer arietinum L. HOM05D002236 ORTHO05D002341 2.9e-12 76.6 118 46.6
CsaV3_6G021810 Cucumis sativus L. HOM05D002236 ORTHO05D002341 3.8e-12 76.3 134 39.6
Sed0019617 Sechium edule HOM05D002236 ORTHO05D002341 3.8e-12 76.3 144 38.9
Atru.chr3.3726 Acer truncatum HOM05D002236 ORTHO05D002341 5.0e-12 75.9 128 42.2
TPR.G11602 Trifolium pratense HOM05D002236 ORTHO05D002341 5.0e-12 75.9 118 44.9
BcaC01g01964 Brassica carinata HOM05D002236 ORTHO05D002341 8.6e-12 75.1 128 43.8
C03p70070 Brassica napus HOM05D002236 ORTHO05D002341 8.6e-12 75.1 128 43.8
FAN16G1888 Fragaria x ananassa HOM05D002236 ORTHO05D002341 1.5e-11 74.3 84 51.2
HanXRQChr13g0402011 Helianthus annuus HOM05D002236 ORTHO05D002341 1.5e-11 74.3 136 40.4
Nitab4.5_0000533g0090 Nicotiana tabacum HOM05D002236 ORTHO05D002341 1.5e-11 74.3 122 39.3
Peaxi162Scf00389g00411 Petunia axillaris HOM05D002236 ORTHO05D002341 1.9e-11 73.9 119 41.2
Nitab4.5_0007369g0030 Nicotiana tabacum HOM05D002236 ORTHO05D002341 2.5e-11 73.6 129 38.0
Hma1.2p1_2156F.1_g315440 Hydrangea macrophylla HOM05D002236 ORTHO05D002341 3.2e-11 73.2 128 39.8
Nn2g12989 Nelumbo nucifera HOM05D002236 ORTHO05D002341 3.2e-11 73.2 128 39.8
Nitab4.5_0000888g0090 Nicotiana tabacum HOM05D002236 ORTHO05D002341 4.2e-11 72.8 122 39.3
FAN21G3956 Fragaria x ananassa HOM05D002236 ORTHO05D002341 5.5e-11 72.4 75 52.0
Phvul.005G137900 Phaseolus vulgaris HOM05D002236 ORTHO05D002341 5.5e-11 72.4 135 40.7
vmacro14481 Vaccinium macrocarpon HOM05D002236 ORTHO05D002341 5.5e-11 72.4 128 39.8
FAN16G3001 Fragaria x ananassa HOM05D002236 ORTHO05D002341 7.2e-11 72.0 75 53.3
PGSC0003DMG400012099 Solanum tuberosum HOM05D002236 ORTHO05D002341 7.2e-11 72.0 129 38.0
ClCG02G020800 Citrullus lanatus HOM05D002236 ORTHO05D002341 9.5e-11 71.6 134 38.8
DCAR_006033 Daucus carota HOM05D002236 ORTHO05D002341 9.5e-11 71.6 93 49.5
Lalb_Chr02g0143541 Lupinus albus HOM05D002236 ORTHO05D002341 9.5e-11 71.6 133 36.8
Nn2g10651 Nelumbo nucifera HOM05D002236 ORTHO05D002341 9.5e-11 71.6 128 39.8
Lj5C176T2 Lonicera japonica HOM05D002236 ORTHO05D002341 1.2e-10 71.2 116 41.4
Thhalv10002508m.g Eutrema salsugineum HOM05D002236 ORTHO05D002341 1.6e-10 70.9 128 40.6
Gohir.D08G018000 Gossypium hirsutum HOM05D002236 ORTHO05D002341 1.6e-10 70.9 128 41.4
MBI05_g18070_MAGBIO Magnolia biondii HOM05D002236 ORTHO05D002341 2.1e-10 70.5 119 41.2
PSO063G4571 Papaver somniferum HOM05D002236 ORTHO05D002341 2.1e-10 70.5 141 36.2
A06p21330 Brassica napus HOM05D002236 ORTHO05D002341 2.8e-10 70.1 128 41.4
CSS0036513 Camellia sinensis var. sinensis HOM05D002236 ORTHO05D002341 2.8e-10 70.1 121 39.7
Cpa.g.sc139.59 Carica papaya HOM05D002236 ORTHO05D002341 2.8e-10 70.1 128 40.6
QL01p036421 Quercus lobata HOM05D002236 ORTHO05D002341 2.8e-10 70.1 128 39.8
BcaB01g01081 Brassica carinata HOM05D002236 ORTHO05D002341 4.7e-10 69.3 125 40.8
FAN11G1937 Fragaria x ananassa HOM05D002236 ORTHO05D002341 4.7e-10 69.3 75 52.0
Nitab4.5_0000022g0280 Nicotiana tabacum HOM05D002236 ORTHO05D002341 4.7e-10 69.3 129 37.2
CSS0046234 Camellia sinensis var. sinensis HOM05D002236 ORTHO05D002341 6.1e-10 68.9 121 38.8
FAN21G2444 Fragaria x ananassa HOM05D002236 ORTHO05D002341 6.1e-10 68.9 70 52.9
Gohir.A08G008000 Gossypium hirsutum HOM05D002236 ORTHO05D002341 8.0e-10 68.6 141 38.3
A08p24210 Brassica napus HOM05D002236 ORTHO05D002341 1.0e-09 68.2 116 37.9
BraA08t34375Z Brassica rapa HOM05D002236 ORTHO05D002341 1.0e-09 68.2 116 37.9
Gorai.004G012500 Gossypium raimondii HOM05D002236 ORTHO05D002341 1.0e-09 68.2 128 40.6
MBI08_g38602_MAGBIO Magnolia biondii HOM05D002236 ORTHO05D002341 1.0e-09 68.2 172 30.8
VMungo1080G0838 Vigna mungo HOM05D002236 ORTHO05D002341 1.0e-09 68.2 149 36.9
BcaC01g00224 Brassica carinata HOM05D002236 ORTHO05D002341 1.4e-09 67.8 116 37.1
Haze_23946 Corylus avellana HOM05D002236 ORTHO05D002341 1.4e-09 67.8 121 41.3
Lj2A1039T64 Lonicera japonica HOM05D002236 ORTHO05D002341 1.4e-09 67.8 94 43.6
C03p77110 Brassica napus HOM05D002236 ORTHO05D002341 1.8e-09 67.4 116 37.1
BolC3t19963H Brassica oleracea HOM05D002236 ORTHO05D002341 1.8e-09 67.4 116 37.1
Oeu062272.2 Olea europaea HOM05D002236 ORTHO05D002341 1.8e-09 67.4 117 38.5
Sed0000019 Sechium edule HOM05D002236 ORTHO05D002341 1.8e-09 67.4 131 36.6
BcaC01g00232 Brassica carinata HOM05D002236 ORTHO05D002341 2.3e-09 67.0 116 37.1
CANSAT54G1605 Cannabis sativa HOM05D002236 ORTHO05D002341 2.3e-09 67.0 128 39.1
PGR102G2556 Punica granatum HOM05D002236 ORTHO05D002341 2.3e-09 67.0 104 44.2
AT3G45620 Arabidopsis thaliana HOM05D002236 ORTHO05D002341 3.0e-09 66.6 143 36.4
Ciclev10028345m.g Citrus clementina HOM05D002236 ORTHO05D002341 3.0e-09 66.6 121 37.2
Aa31LG4G14810 Aethionema arabicum HOM05D002236 ORTHO05D002341 4.0e-09 66.2 128 39.1
TAR376G0644 Trochodendron aralioides HOM05D002236 ORTHO05D002341 4.0e-09 66.2 133 36.1
Actinidia07105 Actinidia chinensis HOM05D002236 ORTHO05D002341 5.2e-09 65.9 121 38.0
ECA234G2527 Erigeron canadensis HOM05D002236 ORTHO05D002341 5.2e-09 65.9 139 38.1
TAR636G1624 Trochodendron aralioides HOM05D002236 ORTHO05D002341 1.2e-08 64.7 113 42.5
SalBow1G8665 Salvia bowleyana HOM05D002236 ORTHO05D002341 1.5e-08 64.3 117 36.8
MELO3C025729.2 Cucumis melo HOM05D002236 ORTHO05D002341 2.0e-08 63.9 142 35.2
Lalb_Chr24g0394411 Lupinus albus HOM05D002236 ORTHO05D002341 3.4e-08 63.2 118 39.8
Psat6g232800 Pisum sativum HOM05D002236 ORTHO05D002341 3.4e-08 63.2 116 37.9
Thecc.09G262300 Theobroma cacao HOM05D002236 ORTHO05D002341 3.4e-08 63.2 109 42.2
TPR.G2449 Trifolium pratense HOM05D002236 ORTHO05D002341 4.4e-08 62.8 126 35.7
HanXRQChr02g0051401 Helianthus annuus HOM05D002236 ORTHO05D002341 7.5e-08 62.0 131 36.6
BolC3t19265H Brassica oleracea HOM05D002236 ORTHO05D002341 1.3e-07 61.2 154 36.4
Migut.B00047 Erythranthe guttata HOM05D002236 ORTHO05D002341 1.7e-07 60.8 117 37.6
SalBow3G0887 Salvia bowleyana HOM05D002236 ORTHO05D002341 2.2e-07 60.5 117 34.2
AUR62040508 Chenopodium quinoa HOM05D002236 ORTHO05D002341 2.8e-07 60.1 108 39.8
HanXRQChr17g0552831 Helianthus annuus HOM05D002236 ORTHO05D002341 2.8e-07 60.1 94 45.7
COL.COLO4_25270 Corchorus olitorius HOM05D002236 ORTHO05D002341 3.7e-07 59.7 111 37.8
Gohir.A03G206300 Gossypium hirsutum HOM05D002236 ORTHO05D002341 3.7e-07 59.7 116 33.6
Ah.01g002350 Amaranthus hybridus HOM05D002236 ORTHO05D002341 8.3e-07 58.5 113 38.9
Sp5g15870 Schrenkiella parvula HOM05D002236 ORTHO05D002341 8.3e-07 58.5 111 38.7
Duzib248G0624 Durio zibethinus HOM05D002236 ORTHO05D002341 1.8e-06 57.4 111 34.2
BraA06t25221Z Brassica rapa HOM05D002236 ORTHO05D002341 7.0e-06 55.5 125 36.8
PGR042G3186 Punica granatum HOM05D002236 ORTHO05D002341 7.0e-06 55.5 135 31.1
HPP92_003606 Vanilla planifolia HOM05D002236 ORTHO05D002341 9.2e-06 55.1 126 38.9


User provided reference genes

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