Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 4.2e-181 637.9 318 100.0
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 9.7e-178 626.7 318 98.1
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 2.6e-146 522.3 267 98.5
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 3.4e-146 521.9 267 98.5
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 1.7e-145 519.6 267 98.1
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 3.3e-125 452.2 267 88.4
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 1.4e-104 383.6 281 74.4
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 1.9e-104 383.3 280 75.7
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 3.9e-102 375.6 273 72.5
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 1.1e-99 367.5 233 78.5
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 1.4e-99 367.1 277 73.3
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 1.4e-99 367.1 276 73.9
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 1.8e-99 366.7 260 73.1
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 2.4e-99 366.3 221 82.8
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 3.1e-99 365.9 214 85.0
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 2.6e-98 362.8 270 71.9
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 5.8e-98 361.7 276 71.7
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 9.9e-98 360.9 259 75.7
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 9.9e-98 360.9 206 86.9
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 2.2e-97 359.8 228 81.1
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 2.2e-97 359.8 275 72.7
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 2.9e-97 359.4 221 81.4
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.8e-97 359.0 223 80.3
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 3.8e-97 359.0 274 70.8
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 3.8e-97 359.0 259 71.8
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 3.8e-97 359.0 272 70.2
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 6.4e-97 358.2 272 71.0
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 6.4e-97 358.2 270 71.5
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 8.4e-97 357.8 224 80.4
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 1.1e-96 357.5 273 70.3
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 1.1e-96 357.5 204 86.3
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 1.1e-96 357.5 274 69.7
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 1.4e-96 357.1 275 71.3
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 1.4e-96 357.1 220 80.0
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 1.4e-96 357.1 275 72.4
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 1.9e-96 356.7 271 69.7
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 1.9e-96 356.7 223 81.6
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 2.4e-96 356.3 271 71.2
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 3.2e-96 355.9 278 72.7
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 3.2e-96 355.9 272 72.1
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 3.2e-96 355.9 267 70.0
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 3.2e-96 355.9 242 77.7
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 4.2e-96 355.5 273 71.4
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 4.2e-96 355.5 220 81.4
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 4.2e-96 355.5 225 79.6
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 4.2e-96 355.5 275 71.3
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 4.2e-96 355.5 224 79.5
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 4.2e-96 355.5 203 86.2
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 5.4e-96 355.1 270 71.1
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 5.4e-96 355.1 269 71.7
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 9.3e-96 354.4 269 69.9
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 9.3e-96 354.4 272 70.2
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 9.3e-96 354.4 263 70.7
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 1.2e-95 354.0 267 68.9
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 1.2e-95 354.0 270 71.5
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 1.6e-95 353.6 271 68.3
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 1.6e-95 353.6 268 69.0
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 2.1e-95 353.2 276 69.6
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 2.1e-95 353.2 203 85.2
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 2.1e-95 353.2 269 69.9
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 2.1e-95 353.2 269 70.6
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 2.7e-95 352.8 244 74.2
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 3.5e-95 352.4 245 73.9
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 3.5e-95 352.4 269 70.3
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 4.6e-95 352.1 276 69.2
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 6.0e-95 351.7 269 71.4
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 6.0e-95 351.7 203 85.2
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 7.9e-95 351.3 212 81.1
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 7.9e-95 351.3 222 79.7
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 7.9e-95 351.3 191 89.0
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 1.0e-94 350.9 267 69.7
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.3e-94 350.5 270 70.0
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 1.8e-94 350.1 268 70.5
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 2.3e-94 349.7 269 69.5
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 3.0e-94 349.4 204 85.3
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 3.9e-94 349.0 261 71.3
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 3.9e-94 349.0 291 65.3
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 5.1e-94 348.6 223 78.5
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 5.1e-94 348.6 261 73.6
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 5.1e-94 348.6 288 68.4
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 5.1e-94 348.6 253 73.1
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 5.1e-94 348.6 258 72.9
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 5.1e-94 348.6 208 84.1
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 1.1e-93 347.4 293 65.9
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 1.5e-93 347.1 269 71.0
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 1.5e-93 347.1 258 72.5
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 1.9e-93 346.7 266 69.5
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 1.9e-93 346.7 274 70.1
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 2.5e-93 346.3 275 69.5
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 2.5e-93 346.3 207 83.6
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 2.5e-93 346.3 202 86.1
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 3.3e-93 345.9 206 82.5
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 3.3e-93 345.9 242 73.6
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 7.4e-93 344.7 225 77.8
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 7.4e-93 344.7 270 70.0
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 1.6e-92 343.6 205 83.4
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 1.6e-92 343.6 263 71.1
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 2.1e-92 343.2 206 82.0
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 4.8e-92 342.0 261 70.1
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 8.1e-92 341.3 267 67.0
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 1.1e-91 340.9 273 67.0
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 1.8e-91 340.1 250 70.0
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 2.4e-91 339.7 204 84.3
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 4.5e-90 335.5 272 68.4
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 5.8e-90 335.1 206 81.6
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 6.4e-89 331.6 343 56.0
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 2.4e-88 329.7 275 66.9
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 3.2e-88 329.3 267 66.3
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 7.1e-88 328.2 217 75.1
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 6.0e-87 325.1 213 75.1
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 1.0e-86 324.3 206 79.1
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 1.3e-86 323.9 280 67.1
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 1.3e-86 323.9 291 62.5
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 2.3e-86 323.2 188 82.4
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 3.0e-86 322.8 188 83.5
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.8e-83 313.5 271 65.7
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 3.1e-83 312.8 199 78.9
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 3.4e-82 309.3 229 70.7
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 2.9e-81 306.2 198 75.3
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 7.9e-79 298.1 335 54.0
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 1.3e-78 297.4 305 58.4
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 5.1e-78 295.4 223 67.3
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 6.7e-78 295.0 156 90.4
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 8.7e-78 294.7 233 68.2
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 2.5e-77 293.1 228 70.6
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 9.7e-77 291.2 269 63.9
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 4.8e-76 288.9 155 89.0
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 4.8e-76 288.9 194 73.7
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.0e-74 283.5 239 65.7
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 1.0e-73 281.2 169 79.3
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 2.9e-73 279.6 156 86.5
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 6.5e-73 278.5 205 66.8
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.1e-71 273.5 153 86.3
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.1e-70 268.9 280 57.5
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 1.7e-68 263.8 150 84.0
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 3.1e-67 259.6 182 73.6
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 1.5e-66 257.3 230 64.3
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.0e-66 256.9 273 56.4
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 2.9e-65 253.1 241 64.3
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 5.0e-65 252.3 188 68.1
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 4.2e-64 249.2 156 79.5
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 4.7e-63 245.7 283 54.8
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.1e-61 241.1 149 80.5
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 9.7e-61 238.0 200 65.0
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 2.5e-56 223.4 136 76.5
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 6.1e-55 218.8 206 59.7
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 6.1e-55 218.8 202 49.0
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 4.4e-53 212.6 157 71.3
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 2.2e-52 210.3 193 65.3
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 6.5e-49 198.7 173 64.2
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 1.5e-48 197.6 346 41.0
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 2.3e-46 190.3 125 75.2
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 1.4e-38 164.5 145 59.3
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 3.1e-35 153.3 180 42.8
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 7.7e-34 148.7 192 40.1
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 3.3e-32 143.3 208 39.4
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 8.9e-30 135.2 79 83.5
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 1.0e-22 111.7 62 85.5
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 5.2e-22 109.4 62 83.9
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 1.2e-18 98.2 59 83.1
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 2.0e-18 97.4 71 70.4
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.9e-12 77.0 42 88.1
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 6.4e-12 75.9 55 69.1
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 1.2e-10 71.6 118 38.1
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.5e-10 70.1 40 82.5
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.3e-09 68.2 36 86.1
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 1.3e-09 68.2 40 82.5
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 2.3e-09 67.4 80 50.0
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 1.5e-08 64.7 32 93.8
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 8.1e-07 58.9 42 66.7
Rhsim08G0128300 Rhododendron simsii HOM05D004138 ORTHO05D339665 2.3e-06 57.4 31 83.9
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 5.2e-06 56.2 34 76.5


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