Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1631 Fragaria x ananassa HOM05D003919 ORTHO05D004906 2.0e-158 562.4 283 100.0
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 3.8e-149 531.6 273 97.8
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.8e-149 531.6 273 97.8
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 5.5e-148 527.7 269 98.1
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 4.3e-145 518.1 263 98.9
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 2.4e-143 512.3 267 95.9
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 3.9e-138 495.0 270 90.4
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 2.4e-135 485.7 269 89.2
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 2.8e-128 462.2 271 82.7
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 8.2e-128 460.7 267 84.3
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 3.1e-127 458.8 267 83.9
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 6.9e-127 457.6 273 83.2
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 4.5e-126 454.9 273 82.8
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 7.7e-126 454.1 265 83.4
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 3.8e-125 451.8 273 82.4
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 5.0e-125 451.4 266 82.3
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 8.5e-125 450.7 266 82.0
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 8.5e-125 450.7 268 81.7
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 3.2e-124 448.7 266 81.6
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 1.6e-123 446.4 267 80.1
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 3.6e-123 445.3 267 80.9
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 4.7e-123 444.9 265 81.9
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 6.1e-123 444.5 265 81.5
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 6.1e-123 444.5 273 80.6
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 2.3e-122 442.6 269 79.9
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 3.9e-122 441.8 263 81.7
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 6.7e-122 441.0 267 79.4
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 2.0e-121 439.5 273 78.8
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 2.0e-121 439.5 263 81.4
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 3.3e-121 438.7 263 81.4
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 4.4e-121 438.3 263 81.4
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 4.4e-121 438.3 273 77.7
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 7.4e-121 437.6 267 80.1
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 7.4e-121 437.6 267 79.4
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 9.7e-121 437.2 265 80.8
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 1.3e-120 436.8 267 79.4
VMungo0251G1503 Vigna mungo HOM05D003919 ORTHO05D004906 1.7e-120 436.4 265 80.0
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 2.2e-120 436.0 261 79.7
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 2.8e-120 435.6 263 81.0
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 2.8e-120 435.6 263 79.5
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 3.7e-120 435.3 273 78.8
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 4.8e-120 434.9 263 81.0
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 4.8e-120 434.9 263 80.2
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 1.1e-119 433.7 262 80.9
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 1.1e-119 433.7 267 79.8
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 2.4e-119 432.6 269 79.9
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 3.1e-119 432.2 267 78.3
arahy.Tifrunner.gnm1.ann1.5S361I Arachis hypogaea HOM05D003919 ORTHO05D004906 6.9e-119 431.0 265 78.5
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 1.2e-118 430.3 265 78.1
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 1.2e-118 430.3 262 79.8
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 2.0e-118 429.5 263 79.8
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 2.0e-118 429.5 263 79.8
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 2.0e-118 429.5 263 79.1
TAR374G0728 Trochodendron aralioides HOM05D003919 ORTHO05D004906 2.6e-118 429.1 263 80.2
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 7.7e-118 427.6 269 76.2
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 1.3e-117 426.8 267 77.5
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 2.2e-117 426.0 263 79.5
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 1.4e-116 423.3 273 78.4
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 5.5e-116 421.4 273 77.7
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 5.5e-116 421.4 261 79.3
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 2.7e-115 419.1 269 76.6
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 4.7e-115 418.3 357 63.3
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 6.1e-115 417.9 269 76.2
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 3.3e-113 412.1 262 76.7
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 6.3e-112 407.9 267 76.0
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 8.2e-112 407.5 263 76.0
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 1.8e-111 406.4 273 73.3
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 1.2e-110 403.7 273 72.2
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 3.5e-110 402.1 263 74.1
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 4.5e-110 401.7 268 72.0
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 1.0e-109 400.6 262 74.4
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 5.0e-109 398.3 267 74.9
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 1.1e-108 397.1 260 74.6
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 1.5e-108 396.7 274 72.3
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 2.5e-108 396.0 263 76.0
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 3.2e-100 369.0 265 70.9
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 7.2e-100 367.9 259 68.7
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 3.0e-98 362.5 259 68.3
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 6.8e-98 361.3 258 68.6
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 1.5e-97 360.1 267 68.5
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 2.6e-97 359.4 267 68.9
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 8.3e-96 354.4 267 68.9
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 4.1e-95 352.1 259 65.3
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 4.2e-92 342.0 342 56.1
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 1.2e-78 297.4 250 56.4
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 1.0e-77 294.3 264 56.4
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 5.2e-66 255.4 154 77.3
MBI03_g34502_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 8.9e-66 254.6 154 77.3
Cpa.g.sc0.157 Carica papaya HOM05D003919 ORTHO05D004906 2.4e-63 246.5 154 74.0
FAN25G1432 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.1e-60 237.7 121 97.5
FAN14G1298 Fragaria x ananassa HOM05D003919 ORTHO05D004906 2.5e-60 236.5 119 99.2
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 3.3e-60 236.1 249 45.4
SEGI_14080 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 3.3e-60 236.1 249 45.4
FAN27G1315 Fragaria x ananassa HOM05D003919 ORTHO05D004906 2.8e-59 233.0 119 98.3
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 1.1e-58 231.1 241 46.9
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 4.4e-57 225.7 246 45.1
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 9.9e-57 224.6 249 43.4
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 1.3e-56 224.2 246 45.5
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 2.9e-56 223.0 246 44.7
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 1.4e-55 220.7 246 43.9
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 3.2e-55 219.5 246 43.5
Gohir.A12G133950 Gossypium hirsutum HOM05D003919 ORTHO05D004906 4.1e-55 219.2 246 43.1
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 4.1e-55 219.2 255 43.5
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 5.4e-55 218.8 241 45.2
Cpa.g.sc0.159 Carica papaya HOM05D003919 ORTHO05D004906 2.2e-48 196.8 119 81.5
COL.COLO4_13756 Corchorus olitorius HOM05D003919 ORTHO05D004906 2.2e-48 196.8 113 87.6
C07p44430 Brassica napus HOM05D003919 ORTHO05D004906 4.9e-48 195.7 109 89.0
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 1.5e-44 184.1 251 37.5
Oeu055860.1 Olea europaea HOM05D003919 ORTHO05D004906 3.3e-44 183.0 107 85.0
MBI03_g34501_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 1.6e-43 180.6 113 81.4
HPP92_012883 Vanilla planifolia HOM05D000456 ORTHO05D004906 4.5e-41 172.6 106 78.3
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 9.9e-41 171.4 248 37.9
SEGI_22186 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 3.8e-40 169.5 119 70.6
HPP92_012910 Vanilla planifolia HOM05D003919 ORTHO05D004906 9.6e-36 154.8 92 79.3
Psat0s1455g0040 Pisum sativum HOM05D003919 ORTHO05D004906 2.1e-22 110.5 202 33.2
FvH4_5g39264 Fragaria vesca HOM05D000731 ORTHO05D004906 3.7e-19 99.8 56 92.9
FAN08G1746 Fragaria x ananassa HOM05D003919 ORTHO05D005006 1.1e-18 98.2 56 91.1
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 5.3e-18 95.9 141 38.3
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 1.2e-17 94.7 248 31.0
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 2.9e-16 90.1 250 28.4
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 2.6e-09 67.0 101 36.6
HPP92_012877 Vanilla planifolia HOM05D003919 ORTHO05D004906 4.2e-07 59.7 155 31.0
Eucgr.H02759 Eucalyptus grandis HOM05D002342 ORTHO05D002407 4.7e-06 56.2 160 28.1
AUR62034979 Chenopodium quinoa HOM05D001677 ORTHO05D001682 6.1e-06 55.8 155 31.0


User provided reference genes

Program Settings