Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1035 Fragaria x ananassa HOM05D015988 ORTHO05D016310 7.9e-72 273.9 157 100.0
FvH4_4g13800 Fragaria vesca HOM05D015988 ORTHO05D016310 2.3e-71 272.3 157 99.4
FAN07G0226 Fragaria x ananassa HOM05D015988 ORTHO05D016310 2.3e-71 272.3 157 99.4
FAN17G2948 Fragaria x ananassa HOM05D015988 ORTHO05D016310 2.3e-71 272.3 157 99.4
RcHm_v2.0_Chr4g0414721 Rosa chinensis HOM05D015988 ORTHO05D016310 3.2e-65 251.9 155 92.3
FAN12G1832 Fragaria x ananassa HOM05D015988 ORTHO05D016310 7.5e-22 107.8 156 44.9
MD04G1010500 Malus domestica HOM05D015988 ORTHO05D016310 2.8e-21 105.9 97 52.6
Prupe.1G010200 Prunus persica HOM05D015988 ORTHO05D016310 4.2e-17 92.0 83 55.4
Prupe.1G009100 Prunus persica HOM05D015988 ORTHO05D016310 5.9e-11 71.6 87 43.7
FAN12G2523 Fragaria x ananassa HOM05D054090 ORTHO05D016310 1.1e-09 67.4 83 41.0
FAN22G0825 Fragaria x ananassa HOM05D054090 ORTHO05D016310 1.5e-09 67.0 83 39.8
Eucgr.I01884 Eucalyptus grandis HOM05D000629 ORTHO05D000576 1.0e-07 60.8 101 31.7
Lalb_Chr06g0176551 Lupinus albus HOM05D000629 ORTHO05D000576 3.0e-07 59.3 97 32.0
Lalb_Chr21g0319171 Lupinus albus HOM05D000629 ORTHO05D000576 3.0e-07 59.3 97 32.0
TPR.G32588 Trifolium pratense HOM05D000629 ORTHO05D000576 3.0e-07 59.3 101 31.7
arahy.Tifrunner.gnm1.ann1.38NBAQ Arachis hypogaea HOM05D000629 ORTHO05D000576 6.8e-07 58.2 77 31.2
arahy.Tifrunner.gnm1.ann1.TFL5QC Arachis hypogaea HOM05D000629 ORTHO05D000576 6.8e-07 58.2 77 31.2
Os01g0109700 Oryza sativa ssp. japonica HOM05D000629 ORTHO05D000576 8.9e-07 57.8 77 37.7
Phvul.004G022900 Phaseolus vulgaris HOM05D000629 ORTHO05D000576 8.9e-07 57.8 77 32.5
SGA_v2.0_scaffold30G12504 Striga asiatica HOM05D000629 ORTHO05D000576 8.9e-07 57.8 81 38.3
VMungo0464G1995 Vigna mungo HOM05D000629 ORTHO05D000576 8.9e-07 57.8 77 32.5
Zm00001eb126360 Zea mays HOM05D000629 ORTHO05D000576 8.9e-07 57.8 77 39.0
Zm00001eb334400 Zea mays HOM05D000629 ORTHO05D000576 8.9e-07 57.8 77 39.0
Medtr6g008995 Medicago truncatula HOM05D000629 ORTHO05D000576 1.2e-06 57.4 96 32.3
Nn3g17050 Nelumbo nucifera HOM05D000629 ORTHO05D000576 1.2e-06 57.4 77 35.1
GSVIVG01020136001 Vitis vinifera HOM05D000629 ORTHO05D000576 1.5e-06 57.0 77 36.4
Dinv24925 Davidia involucrata HOM05D000629 ORTHO05D000576 2.0e-06 56.6 77 35.1
Prupe.3G276300 Prunus persica HOM05D000629 ORTHO05D000576 2.0e-06 56.6 101 31.7
TAR629G1864 Trochodendron aralioides HOM05D000629 ORTHO05D000576 2.6e-06 56.2 77 36.4
Ca_04238_v3 Cicer arietinum L. HOM05D000629 ORTHO05D000576 3.4e-06 55.8 88 31.8
PGR142G2915 Punica granatum HOM05D000629 ORTHO05D000576 3.4e-06 55.8 77 33.8
Medtr6g008970 Medicago truncatula HOM05D000629 ORTHO05D000576 4.4e-06 55.5 77 32.5
EL10Ac6g13094 Beta vulgaris HOM05D000629 ORTHO05D000576 5.8e-06 55.1 76 38.2
Dinv31135 Davidia involucrata HOM05D000629 ORTHO05D000576 5.8e-06 55.1 76 35.5
Glyma.13G067800 Glycine max HOM05D000629 ORTHO05D000576 5.8e-06 55.1 86 30.2
Lju41A28G115 Lonicera japonica HOM05D000629 ORTHO05D000576 5.8e-06 55.1 77 35.1
RcHm_v2.0_Chr2g0169931 Rosa chinensis HOM05D000629 ORTHO05D000576 5.8e-06 55.1 101 30.7
SGA_v2.0_scaffold224G42970 Striga asiatica HOM05D000629 ORTHO05D000576 5.8e-06 55.1 77 37.7
CARHR075690 Cardamine hirsuta HOM05D000629 ORTHO05D000576 7.5e-06 54.7 78 33.3
Manes.17G117254 Manihot esculenta HOM05D000629 ORTHO05D000576 7.5e-06 54.7 101 29.7
CAN.G206.76 Capsicum annuum HOM05D000629 ORTHO05D000576 9.8e-06 54.3 85 34.1
TWI36G1084 Tripterygium wilfordii HOM05D000629 ORTHO05D000576 9.8e-06 54.3 101 27.7


User provided reference genes

Program Settings