Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.3e-290 1001.5 509 100.0
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 3.4e-233 811.6 509 85.3
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.7e-232 809.3 509 83.3
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.9e-232 808.5 510 83.1
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.3e-227 793.1 509 84.7
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 3.2e-223 778.5 474 83.3
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 3.3e-212 741.9 473 78.6
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 3.1e-210 735.3 474 77.8
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 7.6e-209 730.7 474 78.1
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.7e-208 729.6 474 77.4
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 6.5e-208 727.6 475 76.8
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.4e-207 726.5 475 76.8
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 2.5e-207 725.7 474 76.2
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 5.5e-207 724.5 475 77.1
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 5.5e-207 724.5 475 76.4
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.6e-206 723.0 473 76.7
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 6.0e-206 721.1 472 76.5
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 6.0e-206 721.1 475 76.2
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 7.9e-206 720.7 475 76.2
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.3e-205 719.9 475 75.8
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 2.3e-205 719.2 475 75.8
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.3e-205 719.2 472 76.7
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.3e-205 719.2 473 76.3
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 3.9e-205 718.4 475 75.8
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 5.1e-205 718.0 473 75.3
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.1e-205 718.0 474 74.7
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 8.7e-205 717.2 472 76.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 8.7e-205 717.2 472 75.8
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.1e-204 716.8 470 76.6
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.5e-204 716.5 475 76.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.9e-204 716.1 510 72.2
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.5e-204 715.7 472 76.1
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 3.3e-204 715.3 475 75.6
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 3.3e-204 715.3 475 75.4
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 4.3e-204 714.9 476 75.0
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 5.7e-204 714.5 472 76.3
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 5.7e-204 714.5 475 75.4
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 4.8e-203 711.4 478 74.9
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.4e-202 709.9 473 75.1
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.4e-202 709.1 478 74.5
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.4e-202 709.1 478 74.5
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 5.3e-202 708.0 475 74.1
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 6.9e-202 707.6 476 74.6
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.2e-201 706.8 473 75.3
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.5e-201 706.4 478 74.1
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.5e-201 706.4 475 74.3
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 4.5e-201 704.9 478 74.1
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 4.5e-201 704.9 475 74.7
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 5.9e-201 704.5 472 75.4
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.0e-200 703.7 478 73.8
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.7e-200 703.0 478 73.8
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 2.2e-200 702.6 478 73.6
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.2e-200 702.6 473 74.0
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 2.9e-200 702.2 478 73.6
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 5.0e-200 701.4 473 74.2
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 6.5e-200 701.0 473 72.9
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.1e-199 700.3 478 73.4
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.1e-199 700.3 473 73.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.4e-199 699.9 473 73.4
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 2.5e-199 699.1 478 73.4
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.5e-199 699.1 473 73.4
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 7.2e-199 697.6 476 73.1
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.2e-198 696.8 504 70.8
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.6e-198 696.4 491 72.7
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 2.3e-197 692.6 472 73.5
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 2.3e-197 692.6 475 72.2
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 3.9e-197 691.8 470 72.8
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 5.1e-197 691.4 472 72.5
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 8.8e-197 690.6 479 72.7
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.1e-196 690.3 463 74.3
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 2.6e-193 679.1 497 68.6
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 5.9e-193 677.9 474 73.6
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 7.7e-193 677.6 466 72.1
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.7e-192 676.4 471 71.8
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 8.5e-192 674.1 473 70.8
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 2.1e-190 669.5 493 70.4
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 3.0e-189 665.6 470 70.0
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 3.3e-188 662.1 449 75.1
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 3.7e-187 658.7 471 69.4
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 5.3e-186 654.8 472 70.1
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 2.5e-183 646.0 539 64.4
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.2e-183 645.6 474 67.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 5.5e-183 644.8 472 69.5
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 9.4e-183 644.0 471 67.7
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 4.7e-182 641.7 468 67.7
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.3e-181 639.4 468 68.2
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 8.8e-181 637.5 449 71.7
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.6e-177 625.9 476 68.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 7.7e-177 624.4 492 67.3
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.3e-176 623.6 430 74.7
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 8.8e-173 610.9 452 72.3
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 5.0e-168 595.1 571 58.7
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.9e-167 593.2 473 64.9
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 7.2e-167 591.3 447 66.9
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 6.8e-165 584.7 413 71.9
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.2e-164 583.9 437 69.1
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 3.4e-164 582.4 471 61.1
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.7e-161 572.8 425 69.9
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 3.8e-160 568.9 405 72.6
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 9.8e-156 554.3 473 59.2
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 9.5e-151 537.7 476 56.9
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 8.6e-144 514.6 538 55.4
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.3e-139 500.7 272 87.1
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 6.4e-139 498.4 264 89.8
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 6.6e-136 488.4 268 87.3
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.1e-117 426.4 475 50.5
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 4.0e-117 426.0 422 53.3
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.9e-115 419.9 224 90.2
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 6.3e-54 216.1 127 81.1
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.0e-47 194.5 127 72.4
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.1e-45 188.7 237 48.1
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.0e-39 167.9 90 83.3
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 6.2e-25 119.8 79 69.6
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 7.8e-20 102.8 57 82.5
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 8.1e-17 92.8 49 89.8
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 2.1e-12 78.2 44 84.1
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.1e-09 68.2 49 67.3
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.1e-09 68.2 42 76.2
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.4e-08 65.5 42 71.4
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 3.8e-06 57.4 40 72.5


User provided reference genes

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