Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 6.1e-74 281.6 253 100.0
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.4e-40 169.5 221 92.8
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.1e-33 146.4 81 92.6
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.2e-31 140.2 85 88.2
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 3.0e-28 129.8 86 81.4
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.9e-27 127.1 85 82.4
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 1.4e-25 120.9 95 72.6
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 9.9e-24 114.8 95 68.4
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.7e-23 114.0 95 68.4
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 1.9e-22 110.5 91 69.2
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 1.9e-22 110.5 82 72.0
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 3.5e-21 106.3 86 67.4
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 4.6e-21 105.9 91 64.8
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 1.0e-20 104.8 85 68.2
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 1.0e-20 104.8 89 62.9
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 3.0e-20 103.2 86 67.4
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 3.9e-20 102.8 93 65.6
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 8.6e-20 101.7 91 61.5
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 8.6e-20 101.7 87 66.7
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.1e-19 101.3 80 68.8
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.5e-19 100.9 80 68.8
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.9e-19 100.5 85 68.2
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 2.5e-19 100.1 94 60.6
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 2.5e-19 100.1 82 64.6
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.5e-19 100.1 87 63.2
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 3.3e-19 99.8 77 70.1
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 4.3e-19 99.4 91 62.6
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 4.3e-19 99.4 87 66.7
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 7.3e-19 98.6 84 69.0
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 9.5e-19 98.2 85 67.1
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 9.5e-19 98.2 95 58.9
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 3.6e-18 96.3 93 58.1
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 3.6e-18 96.3 81 66.7
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 3.6e-18 96.3 86 64.0
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 4.7e-18 95.9 94 60.6
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 4.7e-18 95.9 86 65.1
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 4.7e-18 95.9 98 57.1
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 6.2e-18 95.5 86 62.8
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 8.1e-18 95.1 94 59.6
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 8.1e-18 95.1 95 57.9
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 1.4e-17 94.4 93 57.0
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.4e-17 94.4 96 57.3
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 1.4e-17 94.4 96 57.3
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 1.8e-17 94.0 87 62.1
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 2.4e-17 93.6 90 62.2
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 2.4e-17 93.6 90 62.2
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 2.4e-17 93.6 90 62.2
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 3.1e-17 93.2 86 60.5
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 4.0e-17 92.8 88 58.0
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 5.2e-17 92.4 80 62.5
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 6.8e-17 92.0 77 64.9
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 8.9e-17 91.7 54 83.3
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 1.2e-16 91.3 81 65.4
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 2.0e-16 90.5 91 56.0
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 2.0e-16 90.5 78 62.8
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.6e-16 90.1 83 61.4
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 2.6e-16 90.1 47 89.4
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 3.4e-16 89.7 88 58.0
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 5.8e-16 89.0 89 56.2
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 5.8e-16 89.0 80 61.2
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 9.9e-16 88.2 46 91.3
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 9.9e-16 88.2 90 56.7
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 1.3e-15 87.8 102 53.9
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 1.7e-15 87.4 92 56.5
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 2.2e-15 87.0 82 57.3
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 4.9e-15 85.9 91 53.8
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 4.9e-15 85.9 78 62.8
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 6.4e-15 85.5 84 59.5
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 1.1e-14 84.7 80 62.5
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 1.1e-14 84.7 46 87.0
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 2.4e-14 83.6 47 83.0
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 3.2e-14 83.2 82 56.1
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 3.2e-14 83.2 80 61.2
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 4.1e-14 82.8 46 84.8
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 4.1e-14 82.8 46 84.8
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 9.2e-14 81.6 46 82.6
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 1.2e-13 81.3 62 69.4
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.6e-13 80.9 80 57.5
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 1.6e-13 80.9 51 76.5
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 2.1e-13 80.5 74 60.8
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 3.5e-13 79.7 47 78.7
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 3.5e-13 79.7 86 57.0
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 6.0e-13 79.0 84 56.0
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 6.0e-13 79.0 51 74.5
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 7.8e-13 78.6 78 56.4
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 1.3e-12 77.8 75 58.7
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 6.6e-12 75.5 37 94.6
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.1e-11 74.7 38 89.5
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 1.9e-11 73.9 50 76.0
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 8.1e-10 68.6 74 52.7
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 6.9e-09 65.5 96 44.8
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.5e-08 64.3 50 66.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 5.8e-08 62.4 89 47.2
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 5.8e-08 62.4 46 65.2


User provided reference genes

Program Settings