Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.5e-242 842.4 414 100.0
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.6e-239 831.6 414 98.8
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 3.9e-235 817.8 411 98.1
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.5e-234 815.8 415 97.3
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 7.5e-231 803.5 438 92.2
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 3.4e-215 751.5 416 90.9
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 2.1e-193 679.1 423 82.0
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 8.1e-193 677.2 414 82.1
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 8.1e-193 677.2 414 82.1
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.1e-192 676.8 414 82.1
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.4e-192 676.4 418 82.3
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 7.6e-191 670.6 418 81.3
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 2.1e-185 652.5 421 77.4
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 2.7e-180 635.6 414 77.3
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 5.1e-179 631.3 421 76.0
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 1.3e-177 626.7 419 75.7
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 1.6e-177 626.3 421 77.0
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 1.1e-176 623.6 421 76.0
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 9.0e-176 620.5 419 75.4
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 3.4e-175 618.6 414 74.6
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 4.5e-175 618.2 424 75.5
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 4.5e-175 618.2 414 74.4
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 5.9e-175 617.8 409 76.8
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.0e-174 617.1 427 73.3
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.0e-174 617.1 421 76.7
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.3e-174 616.7 417 75.1
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.5e-173 612.5 421 75.5
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 7.2e-173 610.9 426 74.2
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 7.2e-173 610.9 421 75.3
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 3.6e-172 608.6 421 74.6
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 7.9e-172 607.4 417 74.6
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 1.4e-171 606.7 428 73.6
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 6.7e-171 604.4 416 74.5
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 1.1e-170 603.6 427 72.4
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 5.7e-170 601.3 416 74.3
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.3e-169 600.1 427 73.8
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.1e-168 597.0 420 72.6
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.4e-168 596.7 414 72.5
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 3.1e-168 595.5 414 73.9
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 4.1e-168 595.1 416 73.3
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.0e-167 592.8 414 71.7
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 2.2e-166 589.3 424 70.8
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.9e-166 589.0 417 72.7
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.1e-165 587.0 415 72.5
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.4e-165 586.6 417 70.3
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 1.2e-164 583.6 424 72.2
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.0e-163 580.5 415 72.3
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 3.9e-163 578.6 417 71.5
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 8.8e-163 577.4 416 72.1
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 2.0e-162 576.2 415 72.3
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 4.4e-162 575.1 414 72.5
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 1.7e-161 573.2 419 72.1
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 4.1e-160 568.5 418 68.9
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 5.3e-160 568.2 415 71.8
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 4.5e-159 565.1 418 68.2
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 5.9e-159 564.7 421 69.1
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 1.0e-158 563.9 418 67.2
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 2.2e-158 562.8 419 67.8
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 5.0e-158 561.6 419 68.5
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 6.5e-158 561.2 418 67.5
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 6.5e-158 561.2 419 67.5
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 4.2e-157 558.5 414 69.1
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 5.5e-157 558.1 422 68.0
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 1.4e-155 553.5 414 68.1
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 5.2e-155 551.6 420 67.4
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.1e-154 550.4 420 67.4
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 3.3e-154 548.9 420 66.9
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 3.3e-154 548.9 420 66.9
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 3.3e-154 548.9 420 66.9
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 7.5e-154 547.7 414 67.6
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 3.1e-152 542.3 421 66.3
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 7.2e-149 531.2 415 67.2
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 4.7e-148 528.5 415 66.7
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 4.7e-148 528.5 415 66.7
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.4e-147 526.9 416 67.5
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.2e-146 523.9 416 66.1
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 1.6e-143 513.5 419 65.6
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.3e-142 510.4 414 66.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 2.2e-142 509.6 415 66.0
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 2.9e-142 509.2 415 66.3
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 2.5e-141 506.1 420 64.5
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.2e-141 505.8 423 63.6
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 2.1e-140 503.1 424 63.0
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 2.7e-140 502.7 414 65.5
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 8.0e-140 501.1 415 65.1
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.0e-139 500.7 419 64.4
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 1.4e-139 500.4 416 63.9
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.8e-139 500.0 417 65.7
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 3.0e-139 499.2 407 66.1
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.2e-135 487.3 481 58.2
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.9e-133 479.9 384 67.2
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.8e-131 473.4 404 63.4
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 2.3e-131 473.0 413 62.2
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 7.8e-127 458.0 362 65.7
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 5.2e-123 445.3 413 59.3
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.4e-120 437.2 257 84.4
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.6e-119 433.7 258 84.1
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 6.0e-111 405.2 463 49.0
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.3e-110 404.1 276 74.6
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.6e-106 389.8 241 81.3
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 1.7e-97 360.5 466 44.0
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.8e-97 359.4 277 70.0
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 7.1e-96 355.1 417 48.9
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.1e-94 349.0 246 74.8
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 6.4e-89 332.0 418 47.1
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 2.4e-88 330.1 466 42.3
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 2.4e-75 287.0 438 42.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 3.8e-73 279.6 271 56.8
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.1e-72 278.1 184 76.6
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 1.5e-45 188.0 165 53.3
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 1.8e-38 164.5 182 50.5
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 4.1e-35 153.3 191 48.2
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 2.7e-34 150.6 501 25.3
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 5.9e-34 149.4 440 28.6
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.9e-33 147.1 494 25.7
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 4.2e-32 143.3 194 42.3
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 2.7e-26 124.0 98 67.3
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.7e-25 121.3 70 84.3
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 8.8e-22 109.0 108 51.9
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 2.0e-13 81.3 106 43.4


User provided reference genes

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