Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 0.0e+00 1158.3 577 100.0
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 5.1e-286 987.3 528 93.2
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.8e-284 980.7 527 92.4
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.6e-279 964.5 530 91.5
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.6e-263 911.4 466 95.3
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 1.7e-241 839.3 539 80.5
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.5e-192 676.0 547 64.4
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 2.6e-165 586.3 400 72.8
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 2.2e-156 556.6 558 53.6
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 4.8e-151 538.9 553 54.1
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.7e-148 530.4 542 53.5
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 2.9e-148 529.6 546 52.7
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 5.0e-148 528.9 569 51.5
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 1.5e-147 527.3 543 53.2
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 4.8e-143 512.3 548 52.7
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 7.2e-139 498.4 618 47.7
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.3e-137 493.4 546 49.5
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 1.3e-135 487.6 515 49.7
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 2.8e-135 486.5 556 49.5
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 3.7e-135 486.1 553 48.6
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 6.3e-135 485.3 542 49.3
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.4e-134 484.2 425 57.6
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 7.0e-134 481.9 542 49.3
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.2e-133 481.1 520 50.6
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.6e-133 480.7 542 48.5
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 7.7e-133 478.4 556 47.8
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.8e-132 476.1 554 48.6
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 4.2e-131 472.6 592 44.9
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 7.2e-131 471.9 517 50.1
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 2.1e-130 470.3 547 49.5
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 4.7e-130 469.2 532 49.2
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.2e-128 464.5 550 48.0
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.3e-127 461.1 608 45.6
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 1.7e-127 460.7 553 45.8
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 6.3e-127 458.8 539 47.1
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 8.3e-127 458.4 543 47.0
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 8.3e-127 458.4 548 48.4
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 9.2e-126 454.9 476 51.5
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 1.2e-125 454.5 520 49.4
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 2.0e-125 453.8 544 47.4
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 2.7e-125 453.4 508 49.0
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 2.7e-125 453.4 544 47.4
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 3.8e-124 449.5 552 45.8
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 8.6e-124 448.4 547 45.9
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.1e-123 448.0 560 45.5
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.5e-123 447.6 544 47.1
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 4.3e-123 446.0 559 45.4
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 5.6e-123 445.7 449 53.0
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 7.3e-123 445.3 544 47.1
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 1.2e-122 444.5 544 46.7
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 2.1e-122 443.7 534 46.8
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 5.2e-121 439.1 533 47.3
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 7.5e-120 435.3 396 55.6
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 6.4e-119 432.2 552 44.9
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 1.9e-118 430.6 488 48.8
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.0e-116 424.9 541 43.8
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 8.6e-116 421.8 582 43.3
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 1.2e-114 417.9 525 45.1
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.3e-113 413.7 355 55.5
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 8.9e-113 411.8 515 46.0
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 1.2e-112 411.4 532 43.2
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.2e-112 411.4 515 45.0
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 3.7e-111 406.4 492 46.5
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 6.4e-111 405.6 478 46.7
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 6.0e-109 399.1 502 47.6
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 7.8e-109 398.7 517 44.1
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.0e-108 398.3 622 38.9
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.9e-107 394.0 469 46.9
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 2.8e-106 390.2 390 51.3
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 2.8e-106 390.2 538 45.5
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.3e-103 381.3 444 46.4
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 6.4e-103 379.0 400 49.8
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.4e-102 377.9 577 40.7
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 5.4e-102 375.9 396 50.8
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 1.2e-101 374.8 422 48.3
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.7e-101 373.6 486 44.7
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 7.8e-101 372.1 423 47.3
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.2e-98 364.8 437 45.3
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 1.6e-98 364.4 562 42.2
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 1.6e-98 364.4 708 34.9
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 6.2e-98 362.5 581 41.5
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.4e-97 360.5 416 47.1
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 3.8e-95 353.2 426 47.2
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 2.4e-94 350.5 379 49.9
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 4.2e-94 349.7 372 51.3
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 1.6e-93 347.8 406 47.8
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 6.0e-93 345.9 568 38.6
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.3e-92 344.0 398 46.5
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 1.2e-90 338.2 522 41.6
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 5.3e-89 332.8 393 46.1
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 4.8e-82 309.7 380 46.3
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 6.2e-82 309.3 381 44.9
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 5.6e-75 286.2 291 49.8
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.2e-69 268.5 320 45.9
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 2.6e-64 250.8 344 41.6
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 1.3e-55 221.9 240 48.3
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 1.4e-52 211.8 504 31.3
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 6.7e-52 209.5 533 30.6
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 2.8e-50 204.1 209 53.1
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 3.1e-49 200.7 280 42.9
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 6.7e-36 156.4 210 42.4
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.6e-32 145.2 225 39.6
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 7.2e-30 136.3 395 28.1
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 8.3e-26 122.9 174 43.1
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 5.2e-20 103.6 135 40.0
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 7.5e-19 99.8 133 39.1
Aqoxy4G01848 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 5.5e-14 83.6 104 44.2
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 2.1e-13 81.6 150 37.3
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 1.8e-12 78.6 145 40.0
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 3.7e-10 70.9 86 46.5
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 4.9e-10 70.5 86 46.5
FAN26G2612 Fragaria x ananassa HOM05D002703 ORTHO05D002921 5.4e-09 67.0 37 97.3
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 4.5e-08 63.9 65 50.8
HPP92_007178 Vanilla planifolia HOM05D006967 ORTHO05D008692 5.0e-07 60.5 91 38.5
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 9.5e-06 56.2 44 56.8


User provided reference genes

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