Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2747 Fragaria x ananassa HOM05D003032 ORTHO05D198947 1.3e-120 436.4 223 100.0
FAN02G2443 Fragaria x ananassa HOM05D003032 ORTHO05D000039 6.9e-29 131.7 223 39.5
RcHm_v2.0_Chr3g0458461 Rosa chinensis HOM05D003032 ORTHO05D003456 1.7e-27 127.1 294 36.7
RcHm_v2.0_Chr3g0458451 Rosa chinensis HOM05D003032 ORTHO05D003456 1.1e-26 124.4 305 33.8
RcHm_v2.0_Chr2g0123521 Rosa chinensis HOM05D003032 ORTHO05D003456 1.6e-25 120.6 303 33.7
FvH4_5g09390 Fragaria vesca HOM05D003032 ORTHO05D003456 1.8e-24 117.1 302 33.1
FAN18G1730 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.8e-24 117.1 302 33.1
MD15G1167200 Malus domestica HOM05D003032 ORTHO05D003456 5.6e-23 112.1 282 32.3
MD01G1175000 Malus domestica HOM05D003032 ORTHO05D003456 1.6e-22 110.5 285 33.0
FvH4_6g07700 Fragaria vesca HOM05D003032 ORTHO05D003456 2.8e-22 109.8 302 32.1
FAN14G4334 Fragaria x ananassa HOM05D003032 ORTHO05D003456 2.8e-22 109.8 302 32.1
RcHm_v2.0_Chr3g0461521 Rosa chinensis HOM05D003032 ORTHO05D003456 3.6e-22 109.4 298 30.9
RcHm_v2.0_Chr7g0233181 Rosa chinensis HOM05D003032 ORTHO05D000039 3.1e-21 106.3 291 30.9
FAN27G2259 Fragaria x ananassa HOM05D003032 ORTHO05D003456 4.5e-20 102.4 284 33.1
FvH4_5g33841 Fragaria vesca HOM05D003032 ORTHO05D003456 5.8e-20 102.1 298 30.9
RcHm_v2.0_Chr2g0111631 Rosa chinensis HOM05D003032 ORTHO05D003456 4.6e-17 92.4 304 29.9
RcHm_v2.0_Chr2g0120621 Rosa chinensis HOM05D003032 ORTHO05D003456 1.3e-14 84.3 313 29.7
FAN20G1368 Fragaria x ananassa HOM05D003032 ORTHO05D003456 2.1e-14 83.6 182 36.8
FAN08G1675 Fragaria x ananassa HOM05D003032 ORTHO05D000039 1.1e-13 81.3 181 33.7
FvH4_1g19120 Fragaria vesca HOM05D003032 ORTHO05D003456 1.4e-13 80.9 300 29.0
RcHm_v2.0_Chr4g0398421 Rosa chinensis HOM05D003032 ORTHO05D003456 1.8e-13 80.5 159 38.4
MD02G1024300 Malus domestica HOM05D038687 ORTHO05D246112 3.1e-13 79.7 220 34.1
RcHm_v2.0_Chr2g0110231 Rosa chinensis HOM05D003032 ORTHO05D003456 3.1e-13 79.7 306 28.1
MD15G1167700 Malus domestica HOM05D003032 ORTHO05D003456 5.3e-13 79.0 156 37.2
MD15G1167500 Malus domestica HOM05D003032 ORTHO05D003456 4.5e-12 75.9 164 36.0
RcHm_v2.0_Chr2g0110151 Rosa chinensis HOM05D003032 ORTHO05D003456 1.0e-11 74.7 304 28.3
RcHm_v2.0_Chr2g0111591 Rosa chinensis HOM05D003032 ORTHO05D003456 1.7e-11 73.9 186 32.8
FAN18G4311 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.9e-10 70.5 167 33.5
FvH4_6g07730 Fragaria vesca HOM05D003032 ORTHO05D003456 4.2e-10 69.3 159 34.0
CiPaw.09G133800 Carya illinoinensis HOM05D003032 ORTHO05D003456 5.5e-10 68.9 157 32.5
CiPaw.09G133700 Carya illinoinensis HOM05D003032 ORTHO05D003456 9.3e-10 68.2 157 32.5
FAN14G5725 Fragaria x ananassa HOM05D003032 ORTHO05D003456 9.3e-10 68.2 159 33.3
RcHm_v2.0_Chr3g0457371 Rosa chinensis HOM05D003032 ORTHO05D003456 9.3e-10 68.2 156 35.3
Cfa001065 Carpinus fangiana HOM05D003032 ORTHO05D003456 1.2e-09 67.8 157 31.8
AUR62044129 Chenopodium quinoa HOM05D003032 ORTHO05D003456 1.2e-09 67.8 112 36.6
FAN25G2432 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.2e-09 67.8 162 30.9
MD10G1271300 Malus domestica HOM05D003032 ORTHO05D003456 1.2e-09 67.8 152 32.2
Gohir.D06G140200 Gossypium hirsutum HOM05D003032 ORTHO05D003456 2.1e-09 67.0 152 30.9
Gorai.010G163600 Gossypium raimondii HOM05D003032 ORTHO05D003456 2.1e-09 67.0 152 30.9
RcHm_v2.0_Chr3g0456931 Rosa chinensis HOM05D003032 ORTHO05D003456 2.1e-09 67.0 140 37.1
Thecc.06G161100 Theobroma cacao HOM05D003032 ORTHO05D003456 2.1e-09 67.0 198 28.8
AUR62035853 Chenopodium quinoa HOM05D003032 ORTHO05D003456 3.5e-09 66.2 111 34.2
AUR62044133 Chenopodium quinoa HOM05D003032 ORTHO05D003456 3.5e-09 66.2 111 34.2
COL.COLO4_22831 Corchorus olitorius HOM05D003032 ORTHO05D003456 3.5e-09 66.2 166 31.9
RcHm_v2.0_Chr5g0012411 Rosa chinensis HOM05D003032 ORTHO05D003456 3.5e-09 66.2 162 30.9
vmacro10933 Vaccinium macrocarpon HOM05D003032 ORTHO05D003456 3.5e-09 66.2 173 28.3
FAN14G0181 Fragaria x ananassa HOM05D003032 ORTHO05D003456 6.0e-09 65.5 52 63.5
Rhsim11G0122800 Rhododendron simsii HOM05D003032 ORTHO05D003456 6.0e-09 65.5 159 29.6
Gohir.A06G122300 Gossypium hirsutum HOM05D003032 ORTHO05D003456 7.9e-09 65.1 152 30.9
TAR624G1316 Trochodendron aralioides HOM05D003032 ORTHO05D003456 7.9e-09 65.1 152 32.9
FAN11G3274 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.0e-08 64.7 165 29.1
Prupe.4G070300 Prunus persica HOM05D003032 ORTHO05D003456 1.0e-08 64.7 164 31.1
TWI09G1589 Tripterygium wilfordii HOM05D003032 ORTHO05D003456 1.0e-08 64.7 161 28.0
FAN09G1547 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.3e-08 64.3 51 66.7
FAN16G0417 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.3e-08 64.3 156 30.8
FAN21G3139 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.3e-08 64.3 165 29.7
FAN21G3669 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.3e-08 64.3 165 29.7
MD10G1271200 Malus domestica HOM05D003032 ORTHO05D003456 1.8e-08 63.9 154 30.5
RcHm_v2.0_Chr3g0456921 Rosa chinensis HOM05D003032 ORTHO05D003456 1.8e-08 63.9 156 31.4
Oeu040942.1 Olea europaea HOM05D003032 ORTHO05D003456 2.3e-08 63.5 167 30.5
FAN02G3614 Fragaria x ananassa HOM05D003032 ORTHO05D003456 3.9e-08 62.8 159 32.1
FAN02G4431 Fragaria x ananassa HOM05D002572 ORTHO05D002800 3.9e-08 62.8 50 66.0
TWI73G0283 Tripterygium wilfordii HOM05D003032 ORTHO05D003456 3.9e-08 62.8 161 28.6
Duzib160G0697 Durio zibethinus HOM05D003032 ORTHO05D003456 6.7e-08 62.0 152 30.3
CSS0022910 Camellia sinensis var. sinensis HOM05D003032 ORTHO05D003456 1.1e-07 61.2 145 30.3
Lsat_1_v5_gn_7_26960 Lactuca sativa HOM05D003032 ORTHO05D003456 1.1e-07 61.2 152 29.6
Peaxi162Scf01055g00115 Petunia axillaris HOM05D003032 ORTHO05D003456 1.1e-07 61.2 153 30.1
Sabra11G0062800 Salix brachista HOM05D003032 ORTHO05D003456 1.1e-07 61.2 157 29.3
Nitab4.5_0005138g0080 Nicotiana tabacum HOM05D003032 ORTHO05D003456 1.5e-07 60.8 157 28.7
SalBow8G3374 Salvia bowleyana HOM05D003032 ORTHO05D003456 1.5e-07 60.8 157 29.3
FvH4_6g06860 Fragaria vesca HOM05D003032 ORTHO05D003456 1.9e-07 60.5 144 32.6
FAN14G0246 Fragaria x ananassa HOM05D003032 ORTHO05D003456 1.9e-07 60.5 54 64.8
GSVIVG01021300001 Vitis vinifera HOM05D003032 ORTHO05D003456 1.9e-07 60.5 152 28.9
CANSAT35G0490 Cannabis sativa HOM05D003032 ORTHO05D003456 2.5e-07 60.1 152 29.6
Eucgr.E02848 Eucalyptus grandis HOM05D003032 ORTHO05D003456 2.5e-07 60.1 160 27.5
Hma1.2p1_0336F.1_g129000 Hydrangea macrophylla HOM05D003032 ORTHO05D003456 2.5e-07 60.1 157 28.7
Prupe.6G314300 Prunus persica HOM05D003032 ORTHO05D003456 2.5e-07 60.1 145 29.7
Sopen02g020740 Solanum pennellii HOM05D003032 ORTHO05D003456 2.5e-07 60.1 157 28.7
PGSC0003DMG400028444 Solanum tuberosum HOM05D003032 ORTHO05D003456 2.5e-07 60.1 157 28.7
FvH4_6g07320 Fragaria vesca HOM05D003032 ORTHO05D003456 3.3e-07 59.7 178 30.9
Rhsim02G0150300 Rhododendron simsii HOM05D003032 ORTHO05D003456 3.3e-07 59.7 129 31.8
MD02G1024700 Malus domestica HOM05D038687 ORTHO05D248948 4.3e-07 59.3 117 37.6
Potri.011G075600 Populus trichocarpa HOM05D003032 ORTHO05D003456 4.3e-07 59.3 45 66.7
arahy.Tifrunner.gnm1.ann1.H1W4M4 Arachis hypogaea HOM05D003032 ORTHO05D003456 5.7e-07 58.9 152 28.3
arahy.Tifrunner.gnm1.ann1.KAT3SX Arachis hypogaea HOM05D003032 ORTHO05D003456 5.7e-07 58.9 152 28.3
FAN09G3748 Fragaria x ananassa HOM05D003032 ORTHO05D003456 5.7e-07 58.9 55 54.5
MD03G1052800 Malus domestica HOM05D003032 ORTHO05D003456 5.7e-07 58.9 45 68.9
Peaxi162Scf00047g00922 Petunia axillaris HOM05D003032 ORTHO05D003456 5.7e-07 58.9 153 29.4
QL05p049864 Quercus lobata HOM05D003032 ORTHO05D003456 5.7e-07 58.9 45 66.7
QL05p052162 Quercus lobata HOM05D003032 ORTHO05D003456 5.7e-07 58.9 45 66.7
CAN.G1537.16 Capsicum annuum HOM05D003032 ORTHO05D003456 7.4e-07 58.5 153 28.1
Migut.M00987 Erythranthe guttata HOM05D003032 ORTHO05D003456 7.4e-07 58.5 152 27.6
Manes.17G061800 Manihot esculenta HOM05D003032 ORTHO05D003456 7.4e-07 58.5 157 28.0
Solyc02g071750.3 Solanum lycopersicum HOM05D003032 ORTHO05D003456 7.4e-07 58.5 157 28.0
Ciclev10016833m.g Citrus clementina HOM05D003032 ORTHO05D003456 9.6e-07 58.2 167 29.9
Dinv12722 Davidia involucrata HOM05D003032 ORTHO05D003456 9.6e-07 58.2 152 28.9
Eucgr.E02852 Eucalyptus grandis HOM05D003032 ORTHO05D003456 9.6e-07 58.2 160 26.9
HanXRQChr04g0112231 Helianthus annuus HOM05D003032 ORTHO05D003456 9.6e-07 58.2 45 64.4
Lj1A1178T70 Lonicera japonica HOM05D003032 ORTHO05D003456 9.6e-07 58.2 152 28.3
FvH4_6g07310 Fragaria vesca HOM05D003032 ORTHO05D003456 1.3e-06 57.8 156 30.8
FvH4_6g07680 Fragaria vesca HOM05D003032 ORTHO05D003456 1.3e-06 57.8 44 70.5
Nitab4.5_0007204g0010 Nicotiana tabacum HOM05D003032 ORTHO05D003456 1.3e-06 57.8 158 27.8
QL05p052148 Quercus lobata HOM05D003032 ORTHO05D003456 1.3e-06 57.8 45 64.4
Aqoxy1G01906 Aquilegia oxysepala HOM05D003032 ORTHO05D003456 1.6e-06 57.4 161 26.7
CAN.G411.4 Capsicum annuum HOM05D003032 ORTHO05D003456 1.6e-06 57.4 157 27.4
Sed0025293 Sechium edule HOM05D003032 ORTHO05D003456 1.6e-06 57.4 162 29.6
Solyc03g005930.3 Solanum lycopersicum HOM05D003032 ORTHO05D003456 1.6e-06 57.4 153 27.5
Sopen03g001940 Solanum pennellii HOM05D003032 ORTHO05D003456 1.6e-06 57.4 153 27.5
Actinidia07660 Actinidia chinensis HOM05D003032 ORTHO05D003456 2.1e-06 57.0 45 60.0
Aqoxy1G01907 Aquilegia oxysepala HOM05D003032 ORTHO05D003456 2.1e-06 57.0 152 28.9
ECA236G0712 Erigeron canadensis HOM05D003032 ORTHO05D003456 2.1e-06 57.0 45 62.2
CAN.G1569.21 Capsicum annuum HOM05D003032 ORTHO05D003456 2.8e-06 56.6 45 60.0
Nitab4.5_0002507g0070 Nicotiana tabacum HOM05D003032 ORTHO05D003456 2.8e-06 56.6 45 62.2
Sc05g0006760 Simmondsia chinensis HOM05D003032 ORTHO05D003456 2.8e-06 56.6 146 27.4
Zm00001eb293070 Zea mays HOM05D003032 ORTHO05D003456 2.8e-06 56.6 114 32.5
Nn1g07285 Nelumbo nucifera HOM05D003032 ORTHO05D003456 3.7e-06 56.2 45 57.8
Nitab4.5_0000982g0010 Nicotiana tabacum HOM05D003032 ORTHO05D003456 3.7e-06 56.2 45 62.2
Sabra16G0207000 Salix brachista HOM05D003032 ORTHO05D003456 3.7e-06 56.2 153 29.4
Sc05g0006770 Simmondsia chinensis HOM05D003032 ORTHO05D003456 3.7e-06 56.2 152 27.6
Oeu041756.1 Olea europaea HOM05D003032 ORTHO05D003456 4.8e-06 55.8 107 33.6
Sabra17G0056300 Salix brachista HOM05D003032 ORTHO05D003456 4.8e-06 55.8 45 60.0
SGA_v2.0_scaffold16G07719 Striga asiatica HOM05D003032 ORTHO05D003456 4.8e-06 55.8 152 27.6
MSTRG.16186 Avicennia marina HOM05D003032 ORTHO05D003456 6.3e-06 55.5 152 28.9
DCAR_027964 Daucus carota HOM05D003032 ORTHO05D003456 6.3e-06 55.5 45 60.0
Lj4g0005760 Lotus japonicus HOM05D003032 ORTHO05D003456 6.3e-06 55.5 45 57.8
EL10Ac8g19855 Beta vulgaris HOM05D003032 ORTHO05D003456 8.2e-06 55.1 152 26.3
FvH4_1g19142 Fragaria vesca HOM05D003032 ORTHO05D003456 8.2e-06 55.1 189 31.2
Oeu004267.1 Olea europaea HOM05D003032 ORTHO05D003456 8.2e-06 55.1 152 27.6
Sed0002907 Sechium edule HOM05D003032 ORTHO05D003456 8.2e-06 55.1 160 28.1


User provided reference genes

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