Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.5e-220 767.3 382 100.0
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.2e-212 741.1 382 97.1
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.3e-210 735.3 382 96.3
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.6e-201 705.3 375 94.1
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.5e-196 688.7 382 91.6
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 3.9e-181 638.3 382 85.1
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 2.5e-143 512.7 372 69.6
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 1.9e-140 503.1 374 67.6
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 3.9e-133 478.8 377 66.3
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 3.2e-127 459.1 384 62.8
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 1.6e-126 456.8 386 62.4
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 2.1e-126 456.4 384 62.5
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 2.0e-124 449.9 376 62.8
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 9.7e-124 447.6 381 60.6
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.7e-123 446.8 382 62.0
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 8.2e-123 444.5 379 62.0
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.1e-122 444.1 386 60.6
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.6e-121 439.5 380 60.3
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.4e-119 433.7 380 59.2
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 5.5e-119 431.8 380 58.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 9.4e-119 431.0 382 58.4
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 9.4e-119 431.0 382 59.7
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.6e-118 430.3 373 59.5
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.7e-118 429.5 378 57.4
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.7e-118 429.5 378 57.4
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 3.6e-118 429.1 373 59.0
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 3.6e-118 429.1 382 58.9
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.3e-117 426.4 378 56.9
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 3.9e-117 425.6 375 58.4
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 8.8e-117 424.5 380 58.4
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 4.4e-116 422.2 375 58.7
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 5.7e-116 421.8 381 57.7
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.3e-115 420.6 380 58.7
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.7e-115 420.2 381 57.7
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.7e-115 420.2 363 57.6
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 8.2e-115 417.9 374 56.7
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 5.3e-114 415.2 390 57.2
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 4.5e-113 412.1 380 55.8
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 3.2e-111 406.0 389 55.8
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 7.2e-111 404.8 380 56.1
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.7e-110 402.9 378 54.8
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.0e-109 401.0 366 56.8
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 1.4e-109 400.6 383 55.4
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.9e-109 399.1 373 56.0
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 5.7e-108 395.2 327 61.8
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.2e-107 393.3 382 54.2
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 1.4e-106 390.6 388 55.2
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.8e-106 390.2 380 55.0
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.1e-106 389.4 373 55.0
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 9.1e-106 387.9 375 52.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.7e-104 383.6 378 53.2
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.1e-103 380.9 373 54.4
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.1e-103 380.9 379 54.6
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.5e-103 380.6 382 52.9
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 2.5e-103 379.8 379 54.4
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 8.0e-102 374.8 374 52.1
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 1.4e-101 374.0 375 54.4
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 2.0e-100 370.2 373 50.1
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.8e-98 363.6 380 51.3
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 4.1e-98 362.5 374 54.0
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 4.1e-98 362.5 383 49.9
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.2e-97 360.9 375 50.4
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.2e-97 360.9 443 49.0
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 4.2e-95 352.4 337 57.0
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 4.0e-93 345.9 393 50.9
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 7.5e-92 341.7 437 43.5
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.3e-91 340.9 360 51.7
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 5.4e-90 335.5 380 48.4
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.6e-89 334.0 369 47.2
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 7.7e-89 331.6 385 47.0
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 3.3e-87 326.2 426 44.8
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 3.4e-84 316.2 385 47.8
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.4e-82 310.8 356 48.0
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 2.4e-82 310.1 385 46.2
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 4.1e-82 309.3 384 44.8
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.7e-81 306.6 354 45.5
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.3e-80 304.3 381 45.9
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.1e-79 301.2 279 57.0
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 4.3e-79 299.3 382 45.0
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 3.4e-76 289.7 305 51.1
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 7.5e-76 288.5 379 43.3
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 7.5e-76 288.5 380 43.2
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 1.3e-75 287.7 352 46.6
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.2e-73 281.2 380 42.6
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 8.6e-72 275.0 304 48.7
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 7.3e-71 271.9 381 42.0
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 7.3e-71 271.9 430 40.5
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 9.5e-71 271.6 380 40.0
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.6e-70 270.8 284 51.8
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 1.8e-69 267.3 385 41.6
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.9e-67 260.0 379 40.4
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 4.9e-67 259.2 298 46.6
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 1.2e-62 244.6 380 36.1
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 1.2e-52 211.5 329 39.8
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.6e-49 201.1 208 51.4
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.1e-49 200.7 213 49.8
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 4.3e-47 193.0 422 33.2
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.1e-46 190.7 216 52.3
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 6.2e-46 189.1 192 54.2
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.7e-43 181.0 282 37.2
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.4e-42 177.2 91 97.8
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.0e-40 170.2 373 30.3
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 6.6e-40 169.1 231 45.9
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.8e-37 161.0 171 53.8
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.2e-33 148.3 302 34.1
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 4.2e-26 123.2 370 26.8
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 9.3e-26 122.1 370 27.8
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 7.9e-25 119.0 321 29.6
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 3.0e-24 117.1 225 32.4
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 5.5e-18 96.3 96 50.0
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 6.1e-17 92.8 101 49.5
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.5e-12 76.6 64 53.1
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.0e-11 75.5 95 43.2
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.7e-11 74.7 63 54.0
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 6.5e-11 72.8 266 24.4
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.1e-10 72.0 64 51.6
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 3.6e-09 67.0 52 59.6


User provided reference genes

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