Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.0e-165 586.6 285 100.0
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.3e-136 490.0 489 57.1
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 6.1e-131 471.1 524 52.5
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.8e-127 459.5 524 51.9
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 1.8e-122 443.0 524 50.2
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 5.6e-92 341.7 472 44.7
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 2.0e-89 333.2 502 40.4
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 6.0e-86 321.6 502 39.4
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.1e-82 309.3 502 38.6
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 4.0e-82 308.9 502 38.0
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 5.2e-82 308.5 398 42.7
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 1.2e-81 307.4 502 38.6
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.6e-81 306.2 502 38.4
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.4e-81 305.8 502 38.4
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 3.8e-80 302.4 492 38.4
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 2.7e-78 296.2 506 37.2
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 8.7e-77 291.2 369 46.3
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 9.6e-76 287.7 505 36.2
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 1.5e-73 280.4 503 35.4
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 2.0e-73 280.0 503 35.8
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 2.2e-72 276.6 493 36.1
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 2.2e-72 276.6 494 37.0
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.9e-72 276.2 486 36.0
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 4.9e-72 275.4 503 35.0
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 8.4e-72 274.6 503 35.0
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 2.4e-71 273.1 476 36.3
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 2.4e-71 273.1 496 35.5
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 3.2e-71 272.7 513 34.9
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 7.1e-71 271.6 513 33.3
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 9.3e-71 271.2 491 35.2
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 6.0e-70 268.5 503 34.8
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 1.7e-69 266.9 516 33.9
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.7e-69 266.9 506 33.8
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.3e-69 266.5 481 34.9
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 8.7e-69 264.6 506 35.0
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 1.1e-68 264.2 503 34.8
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 1.5e-68 263.8 476 34.5
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 1.5e-68 263.8 476 34.5
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 1.5e-68 263.8 514 33.9
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 1.9e-68 263.5 476 34.5
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 1.9e-68 263.5 513 35.1
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 3.3e-68 262.7 253 56.1
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 5.6e-68 261.9 476 34.5
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 7.3e-68 261.5 499 34.7
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 1.3e-67 260.8 335 43.6
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 1.6e-67 260.4 476 34.2
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 2.1e-67 260.0 472 34.5
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 2.1e-67 260.0 516 34.3
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 4.8e-67 258.8 504 34.7
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 1.1e-66 257.7 525 32.8
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 1.8e-66 256.9 276 53.6
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 1.8e-66 256.9 485 36.1
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 2.4e-66 256.5 516 33.7
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 3.1e-66 256.1 496 34.3
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 4.0e-66 255.8 509 33.2
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 4.0e-66 255.8 478 35.8
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 5.3e-66 255.4 473 33.6
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 9.0e-66 254.6 154 76.0
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 9.0e-66 254.6 514 32.9
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 9.0e-66 254.6 156 75.0
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 1.2e-65 254.2 473 34.2
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 1.2e-65 254.2 172 69.8
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 3.4e-65 252.7 276 50.0
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 3.4e-65 252.7 276 50.0
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 4.5e-65 252.3 473 33.6
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 4.5e-65 252.3 470 34.3
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 4.5e-65 252.3 276 49.6
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 2.2e-64 250.0 267 52.1
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 4.9e-64 248.8 503 32.4
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 6.4e-64 248.4 154 76.6
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 1.1e-63 247.7 498 32.5
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 1.4e-63 247.3 503 32.0
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 1.9e-63 246.9 505 32.7
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 3.2e-63 246.1 278 47.8
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 7.1e-63 245.0 219 58.0
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.2e-62 244.2 497 33.0
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 1.6e-62 243.8 505 32.1
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 2.1e-62 243.4 501 32.5
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 2.1e-62 243.4 183 66.7
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 2.7e-62 243.0 508 32.9
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 3.5e-62 242.7 460 33.9
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.3e-61 240.7 225 55.6
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 3.0e-61 239.6 207 59.4
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 3.9e-61 239.2 503 31.6
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 5.1e-61 238.8 225 57.8
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 1.1e-60 237.7 431 38.7
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 2.5e-60 236.5 172 66.3
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 9.6e-60 234.6 487 31.8
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 1.3e-59 234.2 173 67.6
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 1.6e-59 233.8 500 31.6
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 1.6e-59 233.8 502 32.3
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 2.1e-59 233.4 493 31.6
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 4.8e-59 232.3 505 31.3
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 6.2e-59 231.9 168 65.5
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 6.2e-59 231.9 500 32.8
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 3.1e-58 229.6 504 31.2
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 5.3e-58 228.8 154 68.8
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 9.0e-58 228.0 261 47.5
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 2.6e-57 226.5 499 31.9
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 3.4e-57 226.1 510 31.2
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 3.4e-57 226.1 250 49.6
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 5.8e-57 225.3 154 69.5
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 9.9e-57 224.6 154 69.5
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 1.3e-56 224.2 152 66.4
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 3.8e-56 222.6 258 47.7
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 8.4e-56 221.5 155 68.4
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 1.1e-55 221.1 497 33.0
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 7.1e-55 218.4 498 30.7
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 9.3e-55 218.0 154 65.6
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 2.1e-54 216.9 172 61.6
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 6.7e-53 211.8 153 66.0
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.1e-52 211.1 504 30.0
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.1e-50 204.5 154 65.6
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 1.5e-49 200.7 188 55.3
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 3.4e-49 199.5 184 58.7
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 2.2e-48 196.8 156 60.9
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 4.9e-48 195.7 137 71.5
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 2.3e-45 186.8 139 61.9
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 5.1e-45 185.7 180 53.3
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 5.1e-45 185.7 180 53.3
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 8.7e-45 184.9 163 55.8
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 4.3e-44 182.6 465 31.0
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 5.3e-42 175.6 118 72.0
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 9.0e-42 174.9 157 57.3
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 6.3e-35 152.1 272 40.8
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 1.8e-34 150.6 119 58.0
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 3.1e-34 149.8 118 61.9
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 1.2e-33 147.9 100 67.0
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 1.5e-33 147.5 170 48.2
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 2.5e-31 140.2 89 75.3
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 6.1e-30 135.6 88 65.9
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 8.8e-29 131.7 192 39.6
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.4e-26 124.4 80 73.8
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 1.5e-25 120.9 81 66.7
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 3.5e-25 119.8 112 50.9
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 1.1e-23 114.8 467 24.6
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 6.7e-21 105.5 65 70.8
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 2.8e-19 100.1 111 43.2
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 2.4e-18 97.1 132 43.2
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.9e-15 87.4 87 44.8
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 4.0e-13 79.7 143 34.3
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 7.5e-12 75.5 90 40.0
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.3e-11 74.7 138 35.5
Sp4g05220 Schrenkiella parvula HOM05D003469 ORTHO05D004084 1.3e-11 74.7 51 62.7
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 5.3e-10 69.3 105 34.3
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 7.0e-10 68.9 63 55.6
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.2e-06 58.2 46 58.7
PRCOL_00004204 Prasinoderma coloniale HOM05D003469 ORTHO05D004084 1.6e-06 57.8 102 40.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 4.7e-06 56.2 69 37.7


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