Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 8.5e-203 710.3 404 100.0
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.5e-188 661.4 398 96.0
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.2e-184 647.9 400 94.0
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 2.2e-182 642.5 398 94.0
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 1.8e-168 596.3 399 84.2
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 1.8e-165 586.3 399 82.5
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.1e-144 517.3 314 83.1
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 7.1e-133 478.0 360 70.0
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 1.7e-131 473.4 346 71.1
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.2e-129 467.2 341 71.0
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.6e-129 466.8 385 66.2
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 5.1e-123 445.3 354 65.8
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 8.7e-123 444.5 341 68.3
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.5e-122 443.7 359 66.6
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 2.8e-121 439.5 337 66.8
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.1e-120 437.6 354 64.4
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 3.1e-120 436.0 335 69.0
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.2e-119 434.1 354 65.0
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 2.0e-119 433.3 354 65.5
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 2.0e-119 433.3 320 69.4
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.0e-119 433.3 342 66.1
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 4.5e-119 432.2 354 64.4
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 4.5e-119 432.2 355 65.4
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 5.8e-119 431.8 344 65.1
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 7.6e-119 431.4 316 71.5
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 1.3e-118 430.6 343 65.9
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.3e-118 430.6 343 66.2
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.7e-118 430.3 341 66.3
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.7e-118 430.3 343 65.9
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 3.8e-118 429.1 342 65.8
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 4.9e-118 428.7 320 70.0
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 8.4e-118 427.9 339 66.1
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.1e-117 427.6 343 65.0
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.4e-117 427.2 325 68.3
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 2.4e-117 426.4 342 64.9
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 2.4e-117 426.4 340 66.8
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 4.2e-117 425.6 370 61.6
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 4.2e-117 425.6 344 65.1
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 2.1e-116 423.3 286 75.9
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 4.6e-116 422.2 341 66.6
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 1.8e-115 420.2 342 64.3
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.3e-115 419.9 340 65.6
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 6.7e-115 418.3 344 64.0
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 1.5e-114 417.2 392 58.9
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.5e-114 417.2 342 63.5
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 2.5e-114 416.4 344 63.7
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 3.3e-114 416.0 345 65.5
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 3.3e-114 416.0 320 67.8
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 3.3e-114 416.0 342 65.2
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 4.3e-114 415.6 320 67.8
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 5.6e-114 415.2 320 67.5
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 9.6e-114 414.5 345 64.9
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.6e-113 413.7 345 63.8
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 2.8e-113 412.9 427 55.0
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.7e-113 412.5 344 63.4
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 4.8e-113 412.1 331 64.7
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 8.1e-113 411.4 345 64.6
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 1.1e-112 411.0 331 65.0
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 9.0e-112 407.9 343 64.7
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 3.4e-111 406.0 363 63.4
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 9.9e-111 404.4 344 62.5
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 3.8e-110 402.5 344 63.7
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 6.4e-110 401.7 341 62.8
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 1.4e-109 400.6 317 67.5
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.4e-109 400.6 363 61.4
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 3.2e-109 399.4 354 59.6
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 3.2e-109 399.4 343 62.4
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 1.2e-108 397.5 338 61.8
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.6e-108 397.1 322 65.5
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.6e-108 397.1 340 62.6
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 2.1e-108 396.7 354 60.2
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 2.7e-108 396.4 356 59.0
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 4.6e-108 395.6 337 62.3
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 6.0e-108 395.2 356 59.3
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 7.9e-108 394.8 287 71.8
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 1.0e-107 394.4 334 61.7
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.0e-107 394.4 340 62.1
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 1.3e-107 394.0 352 59.1
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.8e-107 393.7 330 63.6
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 8.7e-107 391.3 303 66.0
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 8.7e-107 391.3 349 61.6
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 2.8e-105 386.3 319 63.3
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 6.2e-105 385.2 337 60.8
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 4.0e-104 382.5 317 64.4
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 6.9e-104 381.7 341 59.8
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.2e-103 380.9 341 60.1
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 2.0e-103 380.2 339 60.2
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.4e-103 379.4 339 59.6
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 8.4e-102 374.8 337 61.7
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.0e-99 367.9 344 60.5
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 4.3e-98 362.5 314 61.1
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 4.1e-96 355.9 213 84.0
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 7.6e-95 351.7 283 67.1
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.1e-91 339.0 185 93.5
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 1.0e-86 324.7 265 66.0
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 2.6e-79 300.1 340 52.4
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 4.5e-79 299.3 345 51.0
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 3.0e-75 286.6 356 47.5
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 2.2e-73 280.4 334 51.5
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.8e-72 277.3 332 49.4
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 8.0e-60 235.3 269 48.7
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 9.8e-58 228.4 179 66.5
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 9.1e-56 221.9 224 54.9
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 1.6e-55 221.1 185 65.9
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 4.5e-55 219.5 264 44.3
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 5.9e-55 219.2 267 48.3
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 1.8e-51 207.6 265 45.3
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 2.9e-46 190.3 167 64.1
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 1.9e-40 171.0 172 54.7
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.1e-28 131.0 276 33.7
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 9.9e-26 122.1 75 82.7
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 5.1e-22 109.8 102 60.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.5e-21 108.2 93 63.4
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 2.7e-15 87.4 100 50.0
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.3e-14 85.1 119 42.0
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 1.3e-14 85.1 264 27.7
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 2.3e-14 84.3 194 30.4
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 7.6e-10 69.3 287 26.5


User provided reference genes

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