Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2565 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.5e-98 362.1 179 100.0
FAN26G0189 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.7e-91 339.3 171 97.1
FAN27G1735 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.7e-91 339.3 171 97.1
FAN19G0322 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.0e-91 338.6 170 96.5
FAN09G2363 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.5e-90 336.3 171 95.9
FAN13G0077 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.9e-90 335.9 171 95.9
FAN18G3338 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.5e-90 335.5 171 95.9
FAN28G0341 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.3e-90 335.1 171 95.9
FAN08G2891 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.3e-90 334.7 171 95.3
FAN18G3329 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.3e-90 334.7 171 95.3
FAN05G4307 Fragaria x ananassa HOM05D004532 ORTHO05D000028 7.3e-90 334.0 170 95.9
FAN04G1122 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.1e-89 332.4 171 94.7
FAN19G2172 Fragaria x ananassa HOM05D004532 ORTHO05D000028 6.2e-89 330.9 171 95.3
FvH4_5g38110 Fragaria vesca HOM05D004532 ORTHO05D000028 4.0e-88 328.2 171 95.3
FAN24G0851 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.5e-87 326.2 172 93.6
RcHm_v2.0_Chr7g0240061 Rosa chinensis HOM05D004532 ORTHO05D000028 1.5e-87 326.2 171 94.2
FAN18G0149 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.0e-80 301.6 153 96.7
FAN24G1193 Fragaria x ananassa HOM05D004532 ORTHO05D000028 8.4e-78 293.9 164 90.2
Prupe.1G511300 Prunus persica HOM05D004532 ORTHO05D000028 6.0e-68 261.2 172 78.5
MD15G1362500 Malus domestica HOM05D004532 ORTHO05D000028 1.2e-63 246.9 172 73.8
FAN14G3786 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.0e-63 246.1 171 77.2
MD08G1177100 Malus domestica HOM05D004532 ORTHO05D000028 2.8e-49 199.1 179 63.1
Ciclev10003964m.g Citrus clementina HOM05D004532 ORTHO05D000028 6.1e-36 154.8 173 51.4
Manes.02G156400 Manihot esculenta HOM05D004532 ORTHO05D000028 3.9e-35 152.1 179 51.4
Haze_00565 Corylus avellana HOM05D004532 ORTHO05D000028 2.8e-33 146.0 165 50.9
Phvul.008G170400 Phaseolus vulgaris HOM05D004532 ORTHO05D000028 2.1e-28 129.8 163 48.5
Sabra02G0072700 Salix brachista HOM05D004532 ORTHO05D000028 2.7e-28 129.4 180 46.1
Glyma.13G086400 Glycine max HOM05D004532 ORTHO05D000028 3.6e-28 129.0 174 49.4
Glyma.14G168700 Glycine max HOM05D004532 ORTHO05D000028 8.0e-28 127.9 163 49.7
Potri.002G092300 Populus trichocarpa HOM05D004532 ORTHO05D000028 1.0e-27 127.5 180 45.6
CiPaw.06G022500 Carya illinoinensis HOM05D004532 ORTHO05D000028 5.7e-26 121.7 159 44.0
Lj1g0009703 Lotus japonicus HOM05D004532 ORTHO05D000028 1.3e-25 120.6 159 47.2
Gohir.D02G082700 Gossypium hirsutum HOM05D004532 ORTHO05D000028 1.1e-24 117.5 175 45.1
Nn1g08850 Nelumbo nucifera HOM05D004532 ORTHO05D000028 1.4e-24 117.1 174 42.5
Gohir.A02G075600 Gossypium hirsutum HOM05D004532 ORTHO05D000028 1.2e-23 114.0 176 45.5
Gorai.005G093000 Gossypium raimondii HOM05D004532 ORTHO05D000028 1.2e-23 114.0 175 44.0
Thecc.08G112900 Theobroma cacao HOM05D004532 ORTHO05D000028 1.6e-23 113.6 172 43.0
TWI36G0956 Tripterygium wilfordii HOM05D004532 ORTHO05D000028 4.5e-23 112.1 179 48.6
Atru.chr13.1272 Acer truncatum HOM05D004532 ORTHO05D000028 7.7e-23 111.3 138 50.0
Psat2g075120 Pisum sativum HOM05D004532 ORTHO05D000028 2.2e-22 109.8 178 41.6
Ca_05235_v3 Cicer arietinum L. HOM05D004532 ORTHO05D000028 2.9e-22 109.4 174 39.7
Lalb_Chr10g0102161 Lupinus albus HOM05D004532 ORTHO05D000028 8.5e-22 107.8 173 44.5
QL12p035808 Quercus lobata HOM05D004532 ORTHO05D000028 8.5e-22 107.8 130 48.5
TAR376G0693 Trochodendron aralioides HOM05D004532 ORTHO05D000028 1.9e-21 106.7 160 42.5
Medtr5g061740 Medicago truncatula HOM05D004532 ORTHO05D000028 3.2e-21 105.9 164 42.1
Medtr4g084740 Medicago truncatula HOM05D004532 ORTHO05D000028 7.2e-21 104.8 174 41.4
GSVIVG01022182001 Vitis vinifera HOM05D004532 ORTHO05D000028 6.1e-20 101.7 175 40.0
Lalb_Chr23g0270701 Lupinus albus HOM05D004532 ORTHO05D000028 8.0e-20 101.3 174 41.4
arahy.Tifrunner.gnm1.ann1.GBX0EQ Arachis hypogaea HOM05D004532 ORTHO05D000028 3.0e-19 99.4 158 42.4
THA.LOC104800165 Tarenaya hassleriana HOM05D004532 ORTHO05D000028 5.2e-19 98.6 173 38.7
arahy.Tifrunner.gnm1.ann1.XXIH72 Arachis hypogaea HOM05D004532 ORTHO05D000028 1.5e-18 97.1 158 42.4
AL1G35570 Arabidopsis lyrata HOM05D004532 ORTHO05D000028 4.4e-18 95.5 172 37.2
TAR629G1408 Trochodendron aralioides HOM05D000042 ORTHO05D000028 4.4e-18 95.5 126 46.8
CARHR022480 Cardamine hirsuta HOM05D004532 ORTHO05D000028 1.3e-17 94.0 172 37.8
Dinv13046 Davidia involucrata HOM05D004532 ORTHO05D000028 1.3e-17 94.0 138 42.0
BolC8t49778H Brassica oleracea HOM05D004532 ORTHO05D000028 1.7e-17 93.6 173 36.4
AT1G22130 Arabidopsis thaliana HOM05D004532 ORTHO05D000028 3.7e-17 92.4 172 36.6
Thhalv10008637m.g Eutrema salsugineum HOM05D004532 ORTHO05D000028 4.8e-17 92.0 172 36.6
Carub.0001s2168 Capsella rubella HOM05D004532 ORTHO05D000028 1.4e-16 90.5 170 40.0
BcaC07g39146 Brassica carinata HOM05D004532 ORTHO05D000028 5.4e-16 88.6 172 36.0
C08p21390 Brassica napus HOM05D004532 ORTHO05D000028 5.4e-16 88.6 172 36.0
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 1.6e-15 87.0 172 35.5
BcaB03g14232 Brassica carinata HOM05D004532 ORTHO05D000028 2.0e-15 86.7 172 36.0
BraA08t34789Z Brassica rapa HOM05D004532 ORTHO05D000028 2.0e-15 86.7 172 35.5
Eucgr.H00917 Eucalyptus grandis HOM05D004532 ORTHO05D000028 5.9e-15 85.1 151 41.7
A07p14740 Brassica napus HOM05D004532 ORTHO05D000028 1.0e-14 84.3 173 36.4
BraA07t29219Z Brassica rapa HOM05D004532 ORTHO05D000028 1.0e-14 84.3 173 36.4
BcaC06g34931 Brassica carinata HOM05D004532 ORTHO05D000028 1.3e-14 84.0 173 37.0
C07p21680 Brassica napus HOM05D004532 ORTHO05D000028 1.3e-14 84.0 173 37.0
BolC7t42699H Brassica oleracea HOM05D004532 ORTHO05D000028 2.9e-14 82.8 173 36.4
Sp1g19630 Schrenkiella parvula HOM05D004532 ORTHO05D000028 2.5e-13 79.7 104 44.2
COL.COLO4_16480 Corchorus olitorius HOM05D004532 ORTHO05D000028 7.2e-13 78.2 175 37.7
QL06p050456 Quercus lobata HOM05D004532 ORTHO05D000028 3.6e-12 75.9 174 32.2
Cpa.g.sc66.98 Carica papaya HOM05D004532 ORTHO05D000028 4.7e-12 75.5 129 38.8
Thecc.01G107200 Theobroma cacao HOM05D004532 ORTHO05D000028 8.0e-12 74.7 176 36.4
PSO447G0055 Papaver somniferum HOM05D004532 ORTHO05D000028 1.8e-11 73.6 171 37.4
PSO210G0302 Papaver somniferum HOM05D004532 ORTHO05D000028 3.0e-11 72.8 162 38.3
Sp5g33120 Schrenkiella parvula HOM05D004532 ORTHO05D000028 4.0e-11 72.4 175 36.0
COL.COLO4_03634 Corchorus olitorius HOM05D004532 ORTHO05D000028 6.8e-11 71.6 179 32.4
BcaC08g47635 Brassica carinata HOM05D004532 ORTHO05D000028 2.6e-10 69.7 175 34.9
C06p51890 Brassica napus HOM05D004532 ORTHO05D000028 2.6e-10 69.7 175 34.9
BolC6t40212H Brassica oleracea HOM05D004532 ORTHO05D000028 2.6e-10 69.7 175 34.9
A07p43210 Brassica napus HOM05D004532 ORTHO05D000028 4.4e-10 68.9 175 34.9
BraA07t31843Z Brassica rapa HOM05D004532 ORTHO05D000028 4.4e-10 68.9 175 34.9
Thhalv10019686m.g Eutrema salsugineum HOM05D004532 ORTHO05D000028 7.5e-10 68.2 173 32.9
Hma1.2p1_0120F.1_g056970 Hydrangea macrophylla HOM05D004532 ORTHO05D000028 2.2e-09 66.6 48 60.4
BcaB03g15964 Brassica carinata HOM05D000269 ORTHO05D017431 2.8e-09 66.2 157 36.3
Carub.0002s2487 Capsella rubella HOM05D004532 ORTHO05D000028 4.9e-09 65.5 177 32.8
ClCG07G009420 Citrullus lanatus HOM05D004532 ORTHO05D000028 2.4e-08 63.2 173 32.4
AL2G38240 Arabidopsis lyrata HOM05D004532 ORTHO05D000028 2.7e-07 59.7 177 32.8
CARHR071440 Cardamine hirsuta HOM05D004532 ORTHO05D000028 5.9e-07 58.5 175 32.0
AT1G77980 Arabidopsis thaliana HOM05D004532 ORTHO05D000028 7.7e-07 58.2 177 33.3
TPR.G11085 Trifolium pratense HOM05D004532 ORTHO05D000028 1.0e-06 57.8 51 58.8
Sed0009551 Sechium edule HOM05D004532 ORTHO05D000028 8.6e-06 54.7 184 27.7


User provided reference genes

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