Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.1e-202 709.9 384 100.0
FAN28G0966 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.4e-186 655.6 405 89.6
FAN08G1236 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.4e-185 651.7 405 89.1
FAN20G2401 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.9e-184 647.9 405 88.4
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.3e-178 627.9 405 86.9
FAN09G4582 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.5e-159 565.8 318 96.2
FAN28G0502 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.8e-155 552.4 318 92.8
FvH4_2g04883 Fragaria vesca HOM05D007993 ORTHO05D000898 6.9e-154 547.7 325 91.1
FAN03G2392 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.5e-153 546.6 318 92.1
FAN13G1402 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.3e-152 543.5 318 91.8
FvH4_5g37871 Fragaria vesca HOM05D007993 ORTHO05D000898 2.9e-152 542.3 325 90.2
FAN27G2741 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.3e-151 537.3 318 91.2
FAN12G2805 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.1e-150 536.2 325 89.2
FAN03G3466 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.7e-150 535.8 318 91.8
FvH4_4g10125 Fragaria vesca HOM05D007993 ORTHO05D000898 1.2e-145 520.4 298 93.3
FAN04G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.1e-138 495.4 318 85.2
FAN05G4402 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-136 490.0 318 85.5
FAN12G1044 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.7e-134 482.6 318 83.0
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.1e-130 467.6 255 92.5
FvH4_1g29141 Fragaria vesca HOM05D007993 ORTHO05D000898 8.5e-128 461.1 319 81.2
FAN07G0486 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.5e-127 459.5 269 94.1
FAN04G2812 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.0e-125 454.1 255 93.3
FvH4_4g28760 Fragaria vesca HOM05D007993 ORTHO05D000898 3.7e-91 339.3 325 63.1
FAN23G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 7.3e-71 271.9 186 82.8
FAN28G2534 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.1e-69 268.1 139 96.4
FAN16G1291 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.9e-59 232.6 147 88.4
FAN28G0532 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.8e-56 224.2 147 88.4
RcHm_v2.0_Chr7g0204351 Rosa chinensis HOM05D007993 ORTHO05D000898 8.7e-32 142.1 157 47.1
FAN23G1795 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.9e-31 141.0 72 97.2
FAN07G1300 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.6e-30 137.9 72 95.8
FAN17G1429 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.2e-25 121.7 165 38.8
FvH4_3g26550 Fragaria vesca HOM05D007993 ORTHO05D000898 2.2e-22 110.9 181 33.7
FAN23G1871 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.8e-21 107.8 53 96.2
FAN28G2991 Fragaria x ananassa HOM05D008674 ORTHO05D000898 9.1e-21 105.5 188 32.4
FAN27G3022 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.6e-20 104.0 158 36.1
FAN21G3110 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.0e-19 102.1 188 31.9
FAN10G0819 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.3e-19 101.7 188 31.4
FAN04G1327 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.8e-19 100.1 174 32.8
FAN06G0315 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.0e-19 99.8 153 35.9
FAN08G3199 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.0e-19 99.8 188 30.9
FvH4_5g30680 Fragaria vesca HOM05D007993 ORTHO05D000898 2.5e-18 97.4 153 35.9
FAN16G3666 Fragaria x ananassa HOM05D008674 ORTHO05D000898 9.4e-18 95.5 172 31.4
FvH4_7g12893 Fragaria vesca HOM05D007993 ORTHO05D000898 6.1e-17 92.8 155 34.8
FAN09G2500 Fragaria x ananassa HOM05D008674 ORTHO05D000898 7.9e-17 92.4 311 27.0
FvH4_7g03531 Fragaria vesca HOM05D007993 ORTHO05D000898 1.0e-16 92.0 155 35.5
FAN04G2605 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.0e-16 90.5 188 31.9
FAN28G0955 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.2e-16 89.7 175 30.9
FAN07G0508 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.5e-15 88.2 105 42.9
FAN06G1622 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.3e-15 87.0 99 42.4
FAN25G0376 Fragaria x ananassa HOM05D008674 ORTHO05D000898 4.4e-15 86.7 154 33.8
FAN27G2446 Fragaria x ananassa HOM05D008674 ORTHO05D000898 4.4e-15 86.7 172 32.0
FAN03G1695 Fragaria x ananassa HOM05D008674 ORTHO05D000898 2.2e-14 84.3 318 25.8
FAN09G2370 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.8e-14 83.2 134 36.6
FAN13G3014 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.1e-13 80.1 147 31.3
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.5e-12 77.0 134 34.3
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.5e-12 77.0 134 35.1
FAN25G3499 Fragaria x ananassa HOM05D008674 ORTHO05D000898 3.5e-12 77.0 308 26.3
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.5e-12 76.6 134 35.1
FAN28G0320 Fragaria x ananassa HOM05D008674 ORTHO05D000898 4.5e-12 76.6 116 33.6
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 1.0e-11 75.5 134 34.3
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 1.7e-11 74.7 169 30.2
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 6.5e-11 72.8 130 32.3
FAN17G1842 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.9e-10 71.2 330 25.8
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 1.9e-10 71.2 134 33.6
Ciclev10033783m.g Citrus clementina HOM05D008396 ORTHO05D000898 2.5e-10 70.9 147 33.3
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 2.5e-10 70.9 146 31.5
FAN06G1954 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.5e-10 69.7 146 28.8
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.2e-10 69.3 140 28.6
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 9.4e-10 68.9 146 31.5
Ciclev10021259m.g Citrus clementina HOM05D008396 ORTHO05D000898 9.4e-10 68.9 158 31.0
Ciclev10002333m.g Citrus clementina HOM05D008396 ORTHO05D000898 1.2e-09 68.6 158 31.0
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 2.7e-09 67.4 146 30.8
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.7e-09 66.6 146 28.1
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.0e-08 65.5 133 33.1
FAN27G2070 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.0e-08 65.5 148 27.7
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 1.8e-08 64.7 161 28.0
QL03p022565 Quercus lobata HOM05D007651 ORTHO05D000898 1.8e-08 64.7 144 23.6
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 2.3e-08 64.3 133 33.1
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 3.0e-08 63.9 133 33.1
Dinv07106 Davidia involucrata HOM05D008396 ORTHO05D000898 4.0e-08 63.5 138 29.0
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 4.0e-08 63.5 136 30.9
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 4.0e-08 63.5 146 30.8
FAN25G3804 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.2e-08 63.2 91 35.2
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 5.2e-08 63.2 133 32.3
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 5.2e-08 63.2 133 30.8
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 6.7e-08 62.8 133 30.1
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 6.7e-08 62.8 151 23.8
Dinv40248 Davidia involucrata HOM05D008396 ORTHO05D000898 8.8e-08 62.4 94 34.0
Dinv14218 Davidia involucrata HOM05D008396 ORTHO05D000898 1.2e-07 62.0 137 28.5
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.2e-07 62.0 146 29.5
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 1.5e-07 61.6 146 30.1
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 1.5e-07 61.6 148 29.7
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 2.0e-07 61.2 146 29.5
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 2.6e-07 60.8 133 31.6
Dinv00223 Davidia involucrata HOM05D008396 ORTHO05D000898 2.6e-07 60.8 130 28.5
Dinv10433 Davidia involucrata HOM05D008396 ORTHO05D000898 2.6e-07 60.8 130 28.5
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.6e-07 60.8 133 30.1
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 2.6e-07 60.8 133 31.6
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 3.3e-07 60.5 146 30.8
Dinv10220 Davidia involucrata HOM05D008396 ORTHO05D000898 3.3e-07 60.5 137 28.5
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 3.3e-07 60.5 146 29.5
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 3.3e-07 60.5 133 32.3
RcHm_v2.0_Chr2g0155601 Rosa chinensis HOM05D004096 ORTHO05D000898 3.3e-07 60.5 92 32.6
FAN01G3042 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.4e-07 60.1 91 35.2
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 4.4e-07 60.1 133 30.8
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 5.7e-07 59.7 146 30.1
Dinv09269 Davidia involucrata HOM05D008396 ORTHO05D000898 5.7e-07 59.7 132 28.0
Dinv13152 Davidia involucrata HOM05D008396 ORTHO05D000898 5.7e-07 59.7 132 28.0
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 5.7e-07 59.7 133 31.6
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 5.7e-07 59.7 179 26.8
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 5.7e-07 59.7 133 30.8
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 7.5e-07 59.3 133 31.6
Dinv12671 Davidia involucrata HOM05D008396 ORTHO05D000898 1.3e-06 58.5 137 29.2
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 1.7e-06 58.2 138 26.8
RcHm_v2.0_Chr6g0268131 Rosa chinensis HOM05D010142 ORTHO05D012232 2.2e-06 57.8 105 27.6
Dinv15468 Davidia involucrata HOM05D008396 ORTHO05D000898 2.8e-06 57.4 131 29.8
Dinv35892 Davidia involucrata HOM05D008396 ORTHO05D000898 6.3e-06 56.2 80 33.8
FAN15G0550 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.2e-06 55.8 98 34.7
FAN25G1450 Fragaria x ananassa HOM05D008674 ORTHO05D000898 8.2e-06 55.8 81 34.6


User provided reference genes

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