Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN19G2172 Fragaria x ananassa HOM05D004532 ORTHO05D000028 6.6e-96 354.0 174 100.0
FAN19G0322 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.4e-93 346.3 173 98.3
FAN26G0189 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.4e-93 346.3 174 98.3
FAN27G1735 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.4e-93 346.3 174 98.3
FAN08G2891 Fragaria x ananassa HOM05D004532 ORTHO05D000028 9.0e-93 343.6 174 97.1
FAN09G2363 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.2e-92 343.2 174 97.1
FAN18G3338 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.0e-92 342.4 174 97.1
FAN28G0341 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.6e-92 342.0 174 97.1
FAN13G0077 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.5e-92 341.3 174 96.6
FAN05G4307 Fragaria x ananassa HOM05D004532 ORTHO05D000028 5.8e-92 340.9 173 97.1
FAN24G0851 Fragaria x ananassa HOM05D004532 ORTHO05D000028 9.9e-92 340.1 169 98.2
FAN04G1122 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.8e-91 338.2 174 95.4
FAN18G3329 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.9e-91 337.8 174 96.0
FvH4_5g38110 Fragaria vesca HOM05D004532 ORTHO05D000028 2.4e-90 335.5 174 96.6
FAN19G2565 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.5e-89 331.6 171 95.3
RcHm_v2.0_Chr7g0240061 Rosa chinensis HOM05D004532 ORTHO05D000028 3.5e-89 331.6 173 95.4
FAN18G0149 Fragaria x ananassa HOM05D004532 ORTHO05D000028 8.7e-80 300.4 154 96.1
FAN24G1193 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.4e-77 293.1 166 89.2
Prupe.1G511300 Prunus persica HOM05D004532 ORTHO05D000028 1.1e-69 266.9 175 79.4
MD15G1362500 Malus domestica HOM05D004532 ORTHO05D000028 6.1e-65 251.1 175 73.7
FAN14G3786 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.1e-63 246.9 174 77.6
MD08G1177100 Malus domestica HOM05D004532 ORTHO05D000028 1.4e-50 203.4 175 65.7
Manes.02G156400 Manihot esculenta HOM05D004532 ORTHO05D000028 2.2e-38 162.9 175 54.9
Ciclev10003964m.g Citrus clementina HOM05D004532 ORTHO05D000028 3.7e-38 162.2 175 53.7
Haze_00565 Corylus avellana HOM05D004532 ORTHO05D000028 3.5e-36 155.6 168 53.6
Sabra02G0072700 Salix brachista HOM05D004532 ORTHO05D000028 1.2e-31 140.6 183 48.1
Potri.002G092300 Populus trichocarpa HOM05D004532 ORTHO05D000028 1.7e-30 136.7 183 47.5
Phvul.008G170400 Phaseolus vulgaris HOM05D004532 ORTHO05D000028 2.8e-30 136.0 166 50.6
Glyma.13G086400 Glycine max HOM05D004532 ORTHO05D000028 6.3e-30 134.8 177 50.8
CiPaw.06G022500 Carya illinoinensis HOM05D004532 ORTHO05D000028 8.3e-30 134.4 161 48.4
Glyma.14G168700 Glycine max HOM05D004532 ORTHO05D000028 3.1e-29 132.5 147 54.4
Gohir.D02G082700 Gossypium hirsutum HOM05D004532 ORTHO05D000028 3.8e-27 125.6 179 47.5
Lj1g0009703 Lotus japonicus HOM05D004532 ORTHO05D000028 5.0e-27 125.2 162 48.8
Gohir.A02G075600 Gossypium hirsutum HOM05D004532 ORTHO05D000028 4.2e-26 122.1 180 47.8
Gorai.005G093000 Gossypium raimondii HOM05D004532 ORTHO05D000028 4.2e-26 122.1 179 46.4
Nn1g08850 Nelumbo nucifera HOM05D004532 ORTHO05D000028 7.2e-26 121.3 176 44.3
Thecc.08G112900 Theobroma cacao HOM05D004532 ORTHO05D000028 7.2e-26 121.3 175 44.6
QL12p035808 Quercus lobata HOM05D004532 ORTHO05D000028 4.7e-25 118.6 133 51.9
Atru.chr13.1272 Acer truncatum HOM05D004532 ORTHO05D000028 2.3e-24 116.3 138 51.4
TWI36G0956 Tripterygium wilfordii HOM05D004532 ORTHO05D000028 5.2e-24 115.2 181 47.5
Ca_05235_v3 Cicer arietinum L. HOM05D004532 ORTHO05D000028 8.9e-24 114.4 176 42.0
Medtr5g061740 Medicago truncatula HOM05D004532 ORTHO05D000028 8.9e-24 114.4 167 44.9
Psat2g075120 Pisum sativum HOM05D004532 ORTHO05D000028 8.9e-24 114.4 172 43.6
Lalb_Chr10g0102161 Lupinus albus HOM05D004532 ORTHO05D000028 1.5e-23 113.6 176 44.9
Lalb_Chr23g0270701 Lupinus albus HOM05D004532 ORTHO05D000028 3.4e-23 112.5 151 47.0
TAR376G0693 Trochodendron aralioides HOM05D004532 ORTHO05D000028 3.7e-22 109.0 163 43.6
arahy.Tifrunner.gnm1.ann1.GBX0EQ Arachis hypogaea HOM05D004532 ORTHO05D000028 8.3e-22 107.8 167 44.3
Medtr4g084740 Medicago truncatula HOM05D004532 ORTHO05D000028 8.3e-22 107.8 177 42.4
THA.LOC104800165 Tarenaya hassleriana HOM05D004532 ORTHO05D000028 1.8e-21 106.7 176 39.8
arahy.Tifrunner.gnm1.ann1.XXIH72 Arachis hypogaea HOM05D004532 ORTHO05D000028 1.6e-20 103.6 167 43.7
AL1G35570 Arabidopsis lyrata HOM05D004532 ORTHO05D000028 2.7e-20 102.8 175 38.3
Dinv13046 Davidia involucrata HOM05D004532 ORTHO05D000028 2.7e-20 102.8 141 44.0
GSVIVG01022182001 Vitis vinifera HOM05D004532 ORTHO05D000028 3.5e-20 102.4 177 40.7
CARHR022480 Cardamine hirsuta HOM05D004532 ORTHO05D000028 7.8e-20 101.3 175 38.9
AT1G22130 Arabidopsis thaliana HOM05D004532 ORTHO05D000028 2.3e-19 99.8 175 38.3
BolC8t49778H Brassica oleracea HOM05D004532 ORTHO05D000028 2.9e-19 99.4 176 37.5
Carub.0001s2168 Capsella rubella HOM05D004532 ORTHO05D000028 1.1e-18 97.4 177 40.7
Thhalv10008637m.g Eutrema salsugineum HOM05D004532 ORTHO05D000028 1.5e-18 97.1 175 37.7
TAR629G1408 Trochodendron aralioides HOM05D000042 ORTHO05D000028 9.5e-18 94.4 129 45.7
BcaC07g39146 Brassica carinata HOM05D004532 ORTHO05D000028 1.2e-17 94.0 175 37.1
C08p21390 Brassica napus HOM05D004532 ORTHO05D000028 1.2e-17 94.0 175 37.1
BcaB03g14232 Brassica carinata HOM05D004532 ORTHO05D000028 2.1e-17 93.2 177 37.3
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 3.6e-17 92.4 175 36.6
BraA08t34789Z Brassica rapa HOM05D004532 ORTHO05D000028 4.7e-17 92.0 175 36.6
A07p14740 Brassica napus HOM05D004532 ORTHO05D000028 1.4e-16 90.5 176 36.9
BraA07t29219Z Brassica rapa HOM05D004532 ORTHO05D000028 1.4e-16 90.5 176 36.9
BcaC06g34931 Brassica carinata HOM05D004532 ORTHO05D000028 1.8e-16 90.1 176 37.5
C07p21680 Brassica napus HOM05D004532 ORTHO05D000028 1.8e-16 90.1 176 37.5
BolC7t42699H Brassica oleracea HOM05D004532 ORTHO05D000028 4.0e-16 89.0 176 36.9
Sp1g19630 Schrenkiella parvula HOM05D004532 ORTHO05D000028 2.6e-15 86.3 107 45.8
COL.COLO4_16480 Corchorus olitorius HOM05D004532 ORTHO05D000028 1.7e-14 83.6 178 39.3
MBI05_g00776_MAGBIO Magnolia biondii HOM05D004532 ORTHO05D000028 2.2e-14 83.2 129 45.7
Cpa.g.sc66.98 Carica papaya HOM05D004532 ORTHO05D000028 2.9e-14 82.8 132 40.9
Eucgr.H00917 Eucalyptus grandis HOM05D004532 ORTHO05D000028 3.7e-14 82.4 151 39.7
Thecc.01G107200 Theobroma cacao HOM05D004532 ORTHO05D000028 4.9e-14 82.0 178 38.2
COL.COLO4_03634 Corchorus olitorius HOM05D004532 ORTHO05D000028 1.1e-13 80.9 181 34.3
QL06p050456 Quercus lobata HOM05D004532 ORTHO05D000028 3.2e-13 79.3 169 33.7
Sp5g33120 Schrenkiella parvula HOM05D004532 ORTHO05D000028 7.0e-13 78.2 176 35.8
PSO447G0055 Papaver somniferum HOM05D004532 ORTHO05D000028 1.2e-12 77.4 173 39.9
Thhalv10019686m.g Eutrema salsugineum HOM05D004532 ORTHO05D000028 2.0e-12 76.6 174 34.5
PSO210G0302 Papaver somniferum HOM05D004532 ORTHO05D000028 3.5e-12 75.9 164 39.0
Hma1.2p1_0120F.1_g056970 Hydrangea macrophylla HOM05D004532 ORTHO05D000028 7.8e-12 74.7 50 66.0
BcaC08g47635 Brassica carinata HOM05D004532 ORTHO05D000028 3.9e-11 72.4 177 35.0
C06p51890 Brassica napus HOM05D004532 ORTHO05D000028 3.9e-11 72.4 177 35.0
BolC6t40212H Brassica oleracea HOM05D004532 ORTHO05D000028 3.9e-11 72.4 177 35.0
Aqoxy6G00549 Aquilegia oxysepala HOM05D004532 ORTHO05D000028 5.0e-11 72.0 177 35.6
A07p43210 Brassica napus HOM05D004532 ORTHO05D000028 6.6e-11 71.6 177 35.0
BraA07t31843Z Brassica rapa HOM05D004532 ORTHO05D000028 6.6e-11 71.6 177 35.0
Gohir.D11G224800 Gossypium hirsutum HOM05D004532 ORTHO05D000028 6.6e-11 71.6 158 36.1
Carub.0002s2487 Capsella rubella HOM05D004532 ORTHO05D000028 1.1e-10 70.9 179 33.5
ClCG07G009420 Citrullus lanatus HOM05D004532 ORTHO05D000028 2.5e-10 69.7 178 33.7
BcaB03g15964 Brassica carinata HOM05D000269 ORTHO05D017431 3.3e-10 69.3 137 38.7
AL2G38240 Arabidopsis lyrata HOM05D004532 ORTHO05D000028 3.6e-09 65.9 178 33.1
CARHR071440 Cardamine hirsuta HOM05D004532 ORTHO05D000028 4.7e-09 65.5 177 32.8
AT1G77980 Arabidopsis thaliana HOM05D004532 ORTHO05D000028 1.1e-08 64.3 178 33.1
Aa31LG4G8020 Aethionema arabicum HOM05D004532 ORTHO05D000028 3.1e-08 62.8 183 31.7
Sed0009551 Sechium edule HOM05D004532 ORTHO05D000028 4.4e-07 58.9 189 27.5


User provided reference genes

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