Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 9.2e-158 560.5 341 100.0
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.3e-156 556.6 341 99.7
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 8.0e-146 520.8 370 87.3
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 6.6e-140 501.1 370 85.7
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.9e-126 456.4 337 84.0
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 5.4e-110 401.7 217 99.5
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 5.5e-86 322.0 295 63.1
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 7.2e-86 321.6 287 63.1
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 9.0e-81 304.7 275 62.9
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 3.4e-80 302.8 274 62.4
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 4.5e-80 302.4 279 63.8
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.3e-79 300.8 275 62.5
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 6.5e-79 298.5 259 62.5
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.5e-78 296.6 279 60.2
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 2.7e-77 293.1 286 59.8
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 7.9e-77 291.6 286 58.0
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 6.7e-76 288.5 286 57.7
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 4.4e-75 285.8 264 61.7
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 3.7e-74 282.7 290 57.2
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 6.3e-74 282.0 280 55.7
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 1.4e-73 280.8 278 56.1
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.4e-73 280.0 288 56.6
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 6.9e-73 278.5 277 58.5
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 5.9e-72 275.4 280 55.0
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 7.7e-72 275.0 293 58.4
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.3e-71 274.2 276 55.8
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.7e-71 273.9 273 57.1
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.0e-71 272.3 292 54.1
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.1e-70 271.2 268 58.2
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.4e-70 270.8 278 57.2
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.2e-70 269.2 278 59.0
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 7.2e-70 268.5 283 55.5
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 3.6e-69 266.2 276 59.1
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 4.7e-69 265.8 287 54.7
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 6.1e-69 265.4 279 55.6
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.4e-68 264.2 299 52.5
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.8e-68 263.8 280 55.0
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.8e-68 263.8 311 51.1
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 3.0e-68 263.1 294 54.1
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 3.9e-68 262.7 264 57.2
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.1e-67 261.2 265 56.6
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 2.0e-67 260.4 287 54.0
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 5.7e-67 258.8 287 53.7
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 9.7e-67 258.1 277 54.9
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.3e-66 257.7 278 57.2
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 1.7e-66 257.3 288 53.5
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 2.2e-66 256.9 291 53.3
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 2.2e-66 256.9 272 55.1
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 2.8e-66 256.5 278 56.5
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 4.8e-66 255.8 273 56.0
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 4.8e-66 255.8 281 55.5
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 6.3e-66 255.4 289 53.3
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.8e-65 253.8 259 55.6
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 4.1e-65 252.7 255 58.8
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.1e-65 252.7 251 56.6
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 5.3e-65 252.3 278 54.7
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 7.0e-65 251.9 275 54.2
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 7.0e-65 251.9 287 52.6
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.2e-64 251.1 270 55.6
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.6e-64 250.8 287 53.3
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 2.0e-64 250.4 253 58.9
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 2.6e-64 250.0 287 52.6
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.5e-64 249.6 261 54.4
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 4.5e-64 249.2 265 53.2
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.0e-63 248.1 283 50.5
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 1.0e-63 248.1 290 51.0
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.0e-63 248.1 296 51.7
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.3e-63 247.7 253 58.5
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.7e-63 247.3 287 51.2
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 2.2e-63 246.9 282 51.1
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 3.8e-63 246.1 249 57.8
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 5.5e-62 242.3 285 50.9
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 7.2e-62 241.9 263 55.1
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 9.4e-62 241.5 288 51.0
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 1.6e-61 240.7 258 56.2
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 2.1e-61 240.4 274 52.6
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 3.6e-61 239.6 258 54.7
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 4.7e-61 239.2 251 55.4
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 1.0e-60 238.0 286 50.7
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 8.8e-60 235.0 263 54.0
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 2.0e-59 233.8 287 48.4
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 2.6e-59 233.4 485 36.5
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 2.2e-58 230.3 290 47.6
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.1e-57 228.0 278 52.5
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.1e-57 228.0 204 62.7
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 4.1e-57 226.1 278 50.4
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.1e-54 218.0 285 48.1
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.9e-54 217.2 275 50.5
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 9.4e-54 214.9 257 50.2
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 9.4e-54 214.9 275 48.7
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.4e-52 211.1 338 42.3
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 1.5e-51 207.6 237 54.9
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 4.4e-51 206.1 277 48.4
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.8e-50 203.4 283 45.6
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.8e-49 200.7 220 53.2
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 5.4e-49 199.1 279 47.0
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 7.0e-49 198.7 283 47.0
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 9.1e-49 198.4 330 39.7
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.6e-48 197.6 256 48.4
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 5.9e-48 195.7 290 43.4
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 3.2e-46 189.9 314 41.4
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 4.2e-46 189.5 290 42.8
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 9.5e-46 188.3 275 42.9
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.5e-43 181.0 173 58.4
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 4.4e-43 179.5 156 61.5
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 5.0e-39 166.0 241 43.6
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.9e-38 164.1 249 44.6
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 2.0e-35 154.1 225 42.2
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 2.2e-34 150.6 258 39.5
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 9.2e-33 145.2 216 46.8
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 5.6e-30 136.0 247 35.6
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 3.2e-25 120.2 299 35.5
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 5.4e-25 119.4 277 33.9
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 5.4e-25 119.4 188 39.9
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 3.3e-22 110.2 184 40.8
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 3.6e-21 106.7 79 69.6
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 4.0e-20 103.2 295 34.9
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 2.0e-19 100.9 97 59.8
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.5e-14 84.0 101 52.5
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 1.9e-09 67.8 205 38.5
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 7.1e-09 65.9 204 38.2
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 1.3e-07 61.6 207 30.4
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 3.9e-07 60.1 211 30.8


User provided reference genes

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