Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.3e-92 342.0 153 100.0
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 6.5e-79 297.4 153 89.5
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 3.7e-74 281.6 153 85.6
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 6.3e-74 280.8 149 85.2
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.8e-73 279.3 149 84.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.5e-70 267.7 157 79.6
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 1.6e-64 249.6 149 75.8
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 2.2e-63 245.7 149 74.5
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.5e-54 216.5 153 68.6
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 4.7e-53 211.5 98 100.0
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 2.2e-50 202.6 148 64.9
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 6.3e-50 201.1 156 60.3
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.4e-49 199.9 154 60.4
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.8e-49 199.5 154 61.0
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 2.4e-49 199.1 156 59.6
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 9.1e-49 197.2 153 61.4
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 9.1e-49 197.2 151 62.9
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.6e-48 196.4 151 62.3
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 2.0e-48 196.1 148 60.8
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 4.5e-48 194.9 148 61.5
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 5.9e-48 194.5 156 62.2
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 2.9e-47 192.2 148 60.8
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 2.9e-47 192.2 150 61.3
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 3.8e-47 191.8 151 59.6
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 8.5e-47 190.7 155 57.4
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 8.5e-47 190.7 154 59.7
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 8.5e-47 190.7 154 59.7
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.5e-46 189.1 148 60.1
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 2.5e-46 189.1 150 58.0
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 4.2e-46 188.3 156 57.7
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.6e-45 186.4 148 58.8
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 2.1e-45 186.0 148 56.1
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.1e-45 186.0 148 58.1
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.1e-45 186.0 149 59.7
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 2.1e-45 186.0 152 57.9
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 3.6e-45 185.3 148 60.1
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 4.7e-45 184.9 128 65.6
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.0e-44 183.7 150 60.0
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.4e-44 183.3 128 61.7
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.3e-44 182.6 126 63.5
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 3.0e-44 182.2 136 60.3
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 3.0e-44 182.2 148 58.8
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 4.0e-44 181.8 142 56.3
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 5.2e-44 181.4 122 64.8
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 6.8e-44 181.0 122 63.9
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 6.8e-44 181.0 122 64.8
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 8.8e-44 180.6 130 62.3
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.2e-43 180.3 150 57.3
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.0e-43 179.5 142 57.7
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 4.4e-43 178.3 149 57.0
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 4.4e-43 178.3 126 61.9
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 5.7e-43 177.9 175 52.0
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.3e-42 176.8 158 55.7
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.3e-42 176.8 149 57.0
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 1.7e-42 176.4 148 55.4
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 2.8e-42 175.6 154 57.8
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 4.9e-42 174.9 194 47.4
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 4.9e-42 174.9 186 48.9
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.1e-41 173.7 149 55.0
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.1e-41 173.7 149 55.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.1e-41 173.7 149 55.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.1e-41 173.7 149 55.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.1e-41 173.7 149 55.0
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.4e-41 173.3 152 55.9
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.4e-41 173.3 151 56.3
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 1.4e-41 173.3 151 56.3
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 1.8e-41 172.9 152 52.6
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.8e-41 172.9 149 57.0
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 1.2e-40 170.2 152 52.0
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 1.2e-40 170.2 118 60.2
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.2e-40 170.2 118 60.2
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.2e-40 170.2 154 54.5
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.6e-40 169.9 116 61.2
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 1.6e-40 169.9 151 55.0
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 2.7e-40 169.1 119 59.7
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.7e-40 169.1 116 61.2
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 3.5e-40 168.7 149 54.4
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 4.5e-40 168.3 116 60.3
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 4.5e-40 168.3 116 60.3
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 4.5e-40 168.3 117 59.8
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 1.3e-39 166.8 128 60.2
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 1.7e-39 166.4 152 52.0
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.7e-39 166.4 114 62.3
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 2.9e-39 165.6 164 52.4
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 6.6e-39 164.5 137 54.0
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 1.5e-38 163.3 130 61.5
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 2.5e-38 162.5 129 54.3
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 7.3e-38 161.0 103 67.0
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 7.3e-38 161.0 149 55.0
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 9.5e-38 160.6 128 56.2
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.2e-37 160.2 144 50.7
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 2.1e-37 159.5 129 53.5
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 2.1e-37 159.5 157 47.8
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.0e-36 157.1 126 55.6
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.3e-36 156.0 148 48.0
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.6e-35 152.5 151 49.0
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 3.4e-35 152.1 132 59.1
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.2e-33 145.6 122 54.1
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 3.2e-33 145.6 152 52.6
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 7.0e-33 144.4 131 47.3
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 9.2e-33 144.1 126 55.6
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.9e-30 136.3 140 52.9
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.3e-30 135.6 99 67.7
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 3.3e-30 135.6 99 67.7
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 4.7e-29 131.7 128 50.8
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.0e-28 130.6 90 62.2
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 2.3e-28 129.4 106 59.4
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 4.0e-28 128.6 95 64.2
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 6.8e-28 127.9 95 65.3
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 2.0e-27 126.3 90 58.9
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 2.6e-27 125.9 166 45.2
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 7.5e-27 124.4 97 63.9
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 6.4e-26 121.3 102 55.9
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.4e-25 120.2 78 71.8
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 7.0e-25 117.9 99 60.6
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 6.0e-24 114.8 96 58.3
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 3.0e-23 112.5 101 56.4
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 5.2e-20 101.7 109 41.3
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 6.0e-16 88.2 69 56.5
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 9.2e-09 64.3 37 75.7
arahy.Tifrunner.gnm1.ann1.W44VBU Arachis hypogaea HOM05D043198 ORTHO05D007777 3.9e-07 58.9 39 66.7
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.1e-06 57.4 68 48.5
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.5e-06 57.0 66 47.0
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 1.9e-06 56.6 63 49.2


User provided reference genes

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