Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2564 Fragaria x ananassa HOM05D018240 ORTHO05D025480 4.4e-92 341.3 173 100.0
FAN10G2051 Fragaria x ananassa HOM05D000147 ORTHO05D007841 4.1e-45 185.3 119 83.2
FAN27G1480 Fragaria x ananassa HOM05D018240 ORTHO05D025480 1.0e-40 170.6 88 98.9
FAN06G1411 Fragaria x ananassa HOM05D018240 ORTHO05D025480 5.1e-40 168.3 87 97.7
FAN27G0399 Fragaria x ananassa HOM05D018240 ORTHO05D025480 8.8e-40 167.5 87 96.6
FAN04G0052 Fragaria x ananassa HOM05D003928 ORTHO05D011217 5.5e-26 121.7 131 59.5
FAN06G3234 Fragaria x ananassa HOM05D003928 ORTHO05D011217 1.2e-25 120.6 131 60.3
FAN22G1848 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.2e-25 120.6 131 58.8
FvH4_4g13941 Fragaria vesca HOM05D018240 ORTHO05D000002 2.3e-24 116.3 88 72.7
FAN10G1023 Fragaria x ananassa HOM05D003928 ORTHO05D007133 2.3e-24 116.3 131 58.0
FvH4_3g16330 Fragaria vesca HOM05D018240 ORTHO05D025480 4.4e-23 112.1 67 83.6
FAN09G3858 Fragaria x ananassa HOM05D001482 ORTHO05D001499 2.4e-21 106.3 81 71.6
FvH4_2g13381 Fragaria vesca HOM05D003928 ORTHO05D009025 2.6e-20 102.8 104 62.5
FAN08G0705 Fragaria x ananassa HOM05D003928 ORTHO05D007133 4.2e-18 95.5 75 69.3
Sabra15G0040100 Salix brachista HOM05D003928 ORTHO05D007133 7.2e-18 94.7 75 68.0
Duzib068G1360 Durio zibethinus HOM05D003928 ORTHO05D007133 9.4e-18 94.4 48 95.8
FAN13G0494 Fragaria x ananassa HOM05D003928 ORTHO05D007133 9.4e-18 94.4 48 95.8
MD14G1228200 Malus domestica HOM05D003928 ORTHO05D007133 1.2e-17 94.0 48 93.8
Potri.015G045600 Populus trichocarpa HOM05D003928 ORTHO05D007133 1.2e-17 94.0 75 66.7
Duzib084G0756 Durio zibethinus HOM05D003928 ORTHO05D007133 1.6e-17 93.6 47 97.9
MD06G1218100 Malus domestica HOM05D003928 ORTHO05D007133 2.1e-17 93.2 48 91.7
RcHm_v2.0_Chr7g0185741 Rosa chinensis HOM05D003928 ORTHO05D007133 2.1e-17 93.2 47 95.7
Haze_18702 Corylus avellana HOM05D003928 ORTHO05D007133 3.6e-17 92.4 47 95.7
FvH4_5g11850 Fragaria vesca HOM05D003928 ORTHO05D007133 3.6e-17 92.4 48 93.8
FAN18G2650 Fragaria x ananassa HOM05D003928 ORTHO05D007133 3.6e-17 92.4 48 93.8
FAN18G3471 Fragaria x ananassa HOM05D003928 ORTHO05D007133 3.6e-17 92.4 48 93.8
SGA_v2.0_scaffold25G10975 Striga asiatica HOM05D003928 ORTHO05D007133 3.6e-17 92.4 84 63.1
CANSAT80G1256 Cannabis sativa HOM05D003928 ORTHO05D007133 4.7e-17 92.0 48 91.7
Nitab4.5_0008233g0010 Nicotiana tabacum HOM05D003928 ORTHO05D007133 4.7e-17 92.0 48 91.7
Glyma.05G237400 Glycine max HOM05D003928 ORTHO05D007133 6.1e-17 91.7 48 87.5
PSO017G5964 Papaver somniferum HOM05D003928 ORTHO05D007133 6.1e-17 91.7 48 89.6
PSO478G2973 Papaver somniferum HOM05D003928 ORTHO05D007133 6.1e-17 91.7 48 89.6
Thecc.03G037800 Theobroma cacao HOM05D003928 ORTHO05D007133 6.1e-17 91.7 48 91.7
Manes.05G124730 Manihot esculenta HOM05D003928 ORTHO05D007133 8.0e-17 91.3 48 91.7
Oeu000997.1 Olea europaea HOM05D003928 ORTHO05D007133 8.0e-17 91.3 48 89.6
Potri.012G055000 Populus trichocarpa HOM05D003928 ORTHO05D007133 8.0e-17 91.3 84 61.9
Cpa.g.sc3.486 Carica papaya HOM05D003928 ORTHO05D007133 1.0e-16 90.9 48 89.6
Cfa019749 Carpinus fangiana HOM05D003928 ORTHO05D007133 1.0e-16 90.9 47 93.6
CiPaw.16G051800 Carya illinoinensis HOM05D003928 ORTHO05D007133 1.0e-16 90.9 47 93.6
TWI81G1044 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 1.0e-16 90.9 48 91.7
arahy.Tifrunner.gnm1.ann1.2TSU5I Arachis hypogaea HOM05D003928 ORTHO05D007133 1.4e-16 90.5 48 87.5
Lalb_Chr24g0397881 Lupinus albus HOM05D003928 ORTHO05D007133 1.4e-16 90.5 47 89.4
Ciclev10018705m.g Citrus clementina HOM05D003928 ORTHO05D007133 1.8e-16 90.1 48 91.7
Cc04_g07000 Coffea canephora HOM05D003928 ORTHO05D007133 1.8e-16 90.1 84 59.5
MBI16_g28239_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D007133 1.8e-16 90.1 48 87.5
Medtr8g104380 Medicago truncatula HOM05D003928 ORTHO05D007133 1.8e-16 90.1 48 87.5
Psat7g010840 Pisum sativum HOM05D003928 ORTHO05D007133 1.8e-16 90.1 48 87.5
Sed0028203 Sechium edule HOM05D003928 ORTHO05D007133 1.8e-16 90.1 48 89.6
Glyma.08G044600 Glycine max HOM05D003928 ORTHO05D007133 2.3e-16 89.7 47 87.2
PGR044G0175 Punica granatum HOM05D003928 ORTHO05D007133 2.3e-16 89.7 48 89.6
Eucgr.K02232 Eucalyptus grandis HOM05D003928 ORTHO05D007133 3.0e-16 89.4 48 87.5
Lj5A151T51 Lonicera japonica HOM05D003928 ORTHO05D007133 3.0e-16 89.4 48 85.4
Rhsim08G0131700 Rhododendron simsii HOM05D003928 ORTHO05D007133 3.0e-16 89.4 48 85.4
Solyc03g119270.1 Solanum lycopersicum HOM05D003928 ORTHO05D007133 3.0e-16 89.4 48 87.5
Sopen03g038150 Solanum pennellii HOM05D003928 ORTHO05D007133 3.0e-16 89.4 48 87.5
PGSC0003DMG400005647 Solanum tuberosum HOM05D003928 ORTHO05D007133 3.0e-16 89.4 48 87.5
TWI15G0374 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 3.0e-16 89.4 48 87.5
CSS0042498 Camellia sinensis var. sinensis HOM05D003928 ORTHO05D007133 4.0e-16 89.0 48 87.5
Duzib205G0965 Durio zibethinus HOM05D003928 ORTHO05D007133 4.0e-16 89.0 48 89.6
Migut.I00406 Erythranthe guttata HOM05D003928 ORTHO05D007133 4.0e-16 89.0 48 87.5
Prupe.5G223200 Prunus persica HOM05D003928 ORTHO05D007133 4.0e-16 89.0 48 85.4
Atru.chr9.882 Acer truncatum HOM05D003928 ORTHO05D007133 6.8e-16 88.2 48 87.5
Actinidia02661 Actinidia chinensis HOM05D003928 ORTHO05D007133 6.8e-16 88.2 47 85.1
Ca_25458_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 6.8e-16 88.2 48 85.4
Lalb_Chr22g0353161 Lupinus albus HOM05D003928 ORTHO05D007133 6.8e-16 88.2 48 83.3
Sabra12G0038700 Salix brachista HOM05D003928 ORTHO05D007133 6.8e-16 88.2 84 60.7
CAN.G1425.25 Capsicum annuum HOM05D003928 ORTHO05D007133 8.8e-16 87.8 48 85.4
Gohir.A12G266900 Gossypium hirsutum HOM05D003928 ORTHO05D007133 8.8e-16 87.8 48 87.5
Gohir.D12G267400 Gossypium hirsutum HOM05D003928 ORTHO05D007133 8.8e-16 87.8 48 87.5
Aqoxy3G00241 Aquilegia oxysepala HOM05D003928 ORTHO05D007133 1.2e-15 87.4 48 87.5
ECA233G2967 Erigeron canadensis HOM05D003928 ORTHO05D007133 1.2e-15 87.4 84 57.1
QL10p025782 Quercus lobata HOM05D003928 ORTHO05D007133 1.2e-15 87.4 48 87.5
vmacro17703 Vaccinium macrocarpon HOM05D003928 ORTHO05D007133 1.2e-15 87.4 48 83.3
Phvul.002G317900 Phaseolus vulgaris HOM05D003928 ORTHO05D007133 1.5e-15 87.0 48 83.3
Sc04g0003430 Simmondsia chinensis HOM05D003928 ORTHO05D007133 1.5e-15 87.0 48 79.2
VMungo0251G0737 Vigna mungo HOM05D003928 ORTHO05D007133 1.5e-15 87.0 48 83.3
GSVIVG01008318001 Vitis vinifera HOM05D003928 ORTHO05D007133 1.5e-15 87.0 48 87.5
Gorai.008G287400 Gossypium raimondii HOM05D003928 ORTHO05D007133 2.0e-15 86.7 48 85.4
Lsat_1_v5_gn_8_145181 Lactuca sativa HOM05D003928 ORTHO05D007133 2.0e-15 86.7 48 85.4
ClCG00G001070 Citrullus lanatus HOM05D003928 ORTHO05D007133 2.6e-15 86.3 48 83.3
ClCG04G011000 Citrullus lanatus HOM05D003928 ORTHO05D007133 2.6e-15 86.3 48 83.3
MELO3C002096.2 Cucumis melo HOM05D003928 ORTHO05D007133 2.6e-15 86.3 48 83.3
CsaV3_1G006710 Cucumis sativus L. HOM05D003928 ORTHO05D007133 2.6e-15 86.3 48 83.3
Lj6g0007940 Lotus japonicus HOM05D003928 ORTHO05D007133 2.6e-15 86.3 48 81.2
Peaxi162Scf00683g00003 Petunia axillaris HOM05D003928 ORTHO05D007133 2.6e-15 86.3 63 71.4
Dinv15697 Davidia involucrata HOM05D003928 ORTHO05D007133 4.4e-15 85.5 47 87.2
ATR1125G015 Amborella trichopoda HOM05D003928 ORTHO05D007133 5.7e-15 85.1 47 85.1
A05p31370 Brassica napus HOM05D003928 ORTHO05D007133 5.7e-15 85.1 48 81.2
C05p47670 Brassica napus HOM05D003928 ORTHO05D007133 5.7e-15 85.1 48 81.2
BolC5t33475H Brassica oleracea HOM05D003928 ORTHO05D007133 5.7e-15 85.1 48 81.2
BraA05t21975Z Brassica rapa HOM05D003928 ORTHO05D007133 5.7e-15 85.1 48 81.2
Nn6g34767 Nelumbo nucifera HOM05D003928 ORTHO05D007133 5.7e-15 85.1 46 87.0
Carub.0003s1806 Capsella rubella HOM05D003928 ORTHO05D007133 7.5e-15 84.7 48 83.3
CARHR093630 Cardamine hirsuta HOM05D003928 ORTHO05D007133 7.5e-15 84.7 48 83.3
Thhalv10020046m.g Eutrema salsugineum HOM05D003928 ORTHO05D007133 7.5e-15 84.7 48 83.3
SHI26956 Sapria himalayana HOM05D003928 ORTHO05D007133 1.3e-14 84.0 71 63.4
Aa31LG8G5140 Aethionema arabicum HOM05D003928 ORTHO05D007133 2.8e-14 82.8 47 83.0
HanXRQChr17g0558301 Helianthus annuus HOM05D003928 ORTHO05D007133 2.8e-14 82.8 48 81.2
SEGI_04687 Sequoiadendron giganteum HOM05D003928 ORTHO05D007133 2.8e-14 82.8 48 79.2
Aa31LG10G4780 Aethionema arabicum HOM05D003928 ORTHO05D007133 3.7e-14 82.4 48 81.2
AL3G31520 Arabidopsis lyrata HOM05D003928 ORTHO05D007133 6.3e-14 81.6 48 81.2
AL1G55480 Arabidopsis lyrata HOM05D003928 ORTHO05D007133 1.1e-13 80.9 48 79.2
Ah.15g090400 Amaranthus hybridus HOM05D003928 ORTHO05D007133 1.4e-13 80.5 48 77.1
Carub.0001s3791 Capsella rubella HOM05D003928 ORTHO05D007133 1.4e-13 80.5 47 80.9
AT1G48760 Arabidopsis thaliana HOM05D003928 ORTHO05D007133 1.8e-13 80.1 48 79.2
CDE04G1035 Ceratophyllum demersum HOM05D003928 ORTHO05D007133 2.4e-13 79.7 46 82.6
FAN26G0544 Fragaria x ananassa HOM05D016052 ORTHO05D011217 2.4e-13 79.7 77 63.6
THA.LOC104820383 Tarenaya hassleriana HOM05D003928 ORTHO05D007133 2.4e-13 79.7 48 79.2
TPR.G32710 Trifolium pratense HOM05D003928 ORTHO05D007133 2.4e-13 79.7 48 75.0
AUR62029899 Chenopodium quinoa HOM05D003928 ORTHO05D007133 3.1e-13 79.3 48 77.1
AUR62033807 Chenopodium quinoa HOM05D003928 ORTHO05D007133 3.1e-13 79.3 48 77.1
EL10Ac4g08652 Beta vulgaris HOM05D003928 ORTHO05D007133 5.4e-13 78.6 48 77.1
CARHR038730 Cardamine hirsuta HOM05D003928 ORTHO05D007133 9.1e-13 77.8 48 77.1
BcaC05g27555 Brassica carinata HOM05D003928 ORTHO05D007133 1.6e-12 77.0 47 76.6
C05p35390 Brassica napus HOM05D003928 ORTHO05D007133 1.6e-12 77.0 47 76.6
Sp3g16410 Schrenkiella parvula HOM05D003928 ORTHO05D007133 2.0e-12 76.6 48 75.0
BraA05t20995Z Brassica rapa HOM05D003928 ORTHO05D007133 2.7e-12 76.3 47 76.6
DCAR_023214 Daucus carota HOM05D003928 ORTHO05D007133 2.7e-12 76.3 45 77.8
A05p20900 Brassica napus HOM05D003928 ORTHO05D007133 1.0e-11 74.3 47 74.5
Sp1g35680 Schrenkiella parvula HOM05D003928 ORTHO05D007133 3.8e-11 72.4 47 74.5
HPP92_023134 Vanilla planifolia HOM05D003928 ORTHO05D007133 5.0e-11 72.0 48 58.3
FAN18G0466 Fragaria x ananassa HOM05D007766 ORTHO05D009733 8.5e-11 71.2 47 72.3
FAN18G1064 Fragaria x ananassa HOM05D007766 ORTHO05D009733 8.5e-11 71.2 47 72.3
Mapoly0001s0514 Marchantia polymorpha HOM05D003928 ORTHO05D007133 1.9e-10 70.1 48 64.6
MCO13G008 Micromonas commoda HOM05D003928 ORTHO05D007133 1.6e-09 67.0 48 60.4
SMO367G0105 Selaginella moellendorffii HOM05D003928 ORTHO05D007133 1.6e-09 67.0 46 63.0
Os01g0512200 Oryza sativa ssp. japonica HOM05D003928 ORTHO05D007133 2.7e-09 66.2 46 60.9
Zm00001eb410080 Zea mays HOM05D003928 ORTHO05D007133 3.6e-09 65.9 46 60.9
Zm00001eb137140 Zea mays HOM05D003928 ORTHO05D007133 6.1e-09 65.1 46 58.7
AagrBONN_evm.TU.Sc2ySwM_368.2497 Anthoceros agrestis HOM05D003928 ORTHO05D007133 1.4e-08 63.9 48 62.5
FvH4_7g24551 Fragaria vesca HOM05D003928 ORTHO05D011217 5.7e-07 58.5 93 47.3
CBR_g44606 Chara braunii HOM05D003928 ORTHO05D007133 7.5e-07 58.2 46 52.2
Hund10276 Selenicereus undatus HOM05D003928 ORTHO05D007133 2.8e-06 56.2 31 80.6


User provided reference genes

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