Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.9e-177 623.6 307 100.0
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.8e-176 622.5 307 99.7
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.7e-176 620.5 307 99.3
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.7e-176 620.5 307 99.3
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.7e-176 620.5 307 99.3
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 2.2e-171 605.5 307 96.7
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 3.5e-156 555.1 298 89.3
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 6.1e-153 544.3 307 85.0
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 8.0e-153 543.9 307 85.3
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 4.4e-151 538.1 307 84.4
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 5.7e-151 537.7 306 84.6
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.8e-150 534.6 301 85.4
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 2.4e-149 532.3 306 84.6
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.4e-149 532.3 306 84.3
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 3.1e-149 531.9 307 83.1
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.1e-149 531.6 301 85.0
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 7.0e-149 530.8 307 83.1
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 5.9e-148 527.7 301 84.4
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-147 526.2 306 83.7
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 3.8e-147 525.0 303 81.8
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 5.0e-147 524.6 298 84.2
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.1e-146 523.5 307 82.7
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.5e-146 523.1 307 80.8
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.5e-146 522.3 303 82.5
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.2e-146 521.5 293 83.6
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 9.4e-146 520.4 306 81.4
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.2e-145 520.0 300 83.0
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.6e-145 519.6 306 82.4
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 2.1e-145 519.2 303 80.9
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 4.7e-145 518.1 300 81.0
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 4.7e-145 518.1 306 81.4
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 8.0e-145 517.3 306 81.0
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 3.0e-144 515.4 300 80.3
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 3.0e-144 515.4 306 80.4
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 4.0e-144 515.0 306 80.7
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.2e-143 513.5 306 80.7
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.5e-143 513.1 302 80.5
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.0e-143 512.7 317 77.3
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 2.6e-143 512.3 315 77.8
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 4.4e-143 511.5 303 77.9
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 5.7e-143 511.1 298 80.2
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 9.8e-143 510.4 291 83.2
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.7e-142 509.6 306 80.1
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 2.8e-142 508.8 303 79.5
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 4.9e-142 508.1 324 76.9
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 6.3e-142 507.7 302 79.5
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 8.3e-142 507.3 289 83.0
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.1e-141 506.9 306 79.7
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 5.4e-141 504.6 278 87.4
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 7.0e-141 504.2 301 80.1
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 7.0e-141 504.2 306 80.1
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 4.5e-140 501.5 324 75.9
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.7e-139 499.6 303 79.2
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 5.0e-139 498.0 307 79.2
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 5.6e-138 494.6 303 76.9
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 5.6e-138 494.6 298 76.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 4.7e-137 491.5 302 76.5
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 8.0e-137 490.7 260 89.6
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.4e-136 490.0 302 76.5
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 3.0e-136 488.8 354 67.8
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 4.0e-136 488.4 292 76.4
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 4.0e-136 488.4 299 76.3
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 6.8e-136 487.6 303 77.6
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 8.9e-136 487.3 292 77.1
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 5.7e-135 484.6 302 75.5
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 9.8e-135 483.8 299 75.9
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 9.8e-135 483.8 337 70.9
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 1.3e-134 483.4 292 76.0
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.2e-134 482.6 299 75.9
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 2.9e-134 482.3 301 77.7
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 4.9e-134 481.5 296 77.0
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 4.9e-134 481.5 298 75.5
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.1e-133 480.3 307 72.3
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.1e-133 480.3 300 75.3
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 1.4e-133 479.9 296 76.7
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 1.8e-133 479.6 296 76.7
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 4.1e-133 478.4 296 76.4
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 4.1e-133 478.4 296 76.4
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.1e-133 478.4 295 78.3
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 1.6e-132 476.5 299 75.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 2.0e-132 476.1 307 71.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 5.9e-132 474.6 299 75.3
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 8.6e-131 470.7 292 74.3
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 5.6e-130 468.0 301 73.4
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 6.2e-129 464.5 321 70.4
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 7.5e-127 457.6 299 71.9
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 7.5e-127 457.6 296 70.9
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.4e-125 452.6 300 70.0
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.6e-124 449.9 303 74.9
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.7e-123 446.4 300 71.7
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 7.3e-122 441.0 290 70.7
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 2.8e-121 439.1 268 74.6
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 3.5e-116 422.2 297 68.4
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 5.2e-104 381.7 224 78.6
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 7.6e-103 377.9 302 59.9
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 7.1e-101 371.3 294 59.2
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 4.8e-97 358.6 202 84.7
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.4e-96 357.1 300 59.3
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 8.4e-94 347.8 287 59.9
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.2e-92 344.0 204 76.5
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.2e-87 327.4 198 75.8
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.2e-79 300.8 187 75.9
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.8e-72 276.9 170 79.4
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.3e-70 270.8 259 51.4
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 4.5e-63 245.7 145 78.6
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 7.2e-61 238.4 151 72.2
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 6.9e-56 221.9 152 72.4
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.2e-53 212.6 142 76.1
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 8.2e-41 171.8 109 75.2
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.3e-38 164.5 100 77.0
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 5.9e-31 139.0 79 86.1
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 1.5e-29 134.4 83 77.1
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.4e-27 127.9 121 59.5
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.8e-25 120.2 73 74.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.9e-25 119.4 75 80.0
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.4e-24 117.9 332 26.2
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 2.0e-23 114.0 326 27.0
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 9.5e-21 105.1 296 24.0
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.2e-10 71.6 41 78.0


User provided reference genes

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