Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0585 Fragaria x ananassa HOM05D000929 ORTHO05D004813 3.9e-31 137.5 69 100.0
FAN04G0569 Fragaria x ananassa HOM05D000929 ORTHO05D004813 3.3e-30 134.4 68 98.5
FAN08G3498 Fragaria x ananassa HOM05D000929 ORTHO05D004813 3.3e-30 134.4 68 98.5
FvH4_5g25110 Fragaria vesca HOM05D000929 ORTHO05D004813 7.3e-30 133.3 68 97.1
FAN18G2918 Fragaria x ananassa HOM05D000929 ORTHO05D004813 7.3e-30 133.3 68 97.1
RcHm_v2.0_Chr4g0407221 Rosa chinensis HOM05D000929 ORTHO05D004813 7.3e-30 133.3 68 97.1
RcHm_v2.0_Chr7g0215311 Rosa chinensis HOM05D000929 ORTHO05D004813 7.3e-30 133.3 68 97.1
Prupe.2G056200 Prunus persica HOM05D000929 ORTHO05D004813 4.7e-29 130.6 68 94.1
FAN13G0018 Fragaria x ananassa HOM05D000929 ORTHO05D004813 6.2e-29 130.2 68 97.1
Ciclev10010995m.g Citrus clementina HOM05D000929 ORTHO05D004813 1.8e-28 128.6 68 89.7
Atru.chr8.2611 Acer truncatum HOM05D000929 ORTHO05D004813 2.3e-28 128.3 68 89.7
Potri.004G235200 Populus trichocarpa HOM05D000929 ORTHO05D004813 2.3e-28 128.3 68 92.6
QL12p003602 Quercus lobata HOM05D000929 ORTHO05D004813 3.1e-28 127.9 68 91.2
Thecc.03G320400 Theobroma cacao HOM05D000929 ORTHO05D004813 3.1e-28 127.9 68 91.2
TWI60G0350 Tripterygium wilfordii HOM05D000929 ORTHO05D004813 4.0e-28 127.5 68 91.2
Dinv37432 Davidia involucrata HOM05D000929 ORTHO05D004813 5.2e-28 127.1 68 89.7
Dinv41800 Davidia involucrata HOM05D000929 ORTHO05D004813 5.2e-28 127.1 68 89.7
Cpa.g.sc24.17 Carica papaya HOM05D000929 ORTHO05D004813 6.8e-28 126.7 68 88.2
TAR362G0882 Trochodendron aralioides HOM05D000929 ORTHO05D004813 6.8e-28 126.7 68 88.2
Cfa012306 Carpinus fangiana HOM05D000929 ORTHO05D004813 8.9e-28 126.3 68 89.7
Haze_08424 Corylus avellana HOM05D000929 ORTHO05D004813 8.9e-28 126.3 68 89.7
CiPaw.12G055500 Carya illinoinensis HOM05D000929 ORTHO05D004813 1.2e-27 125.9 68 89.7
COL.COLO4_16747 Corchorus olitorius HOM05D000929 ORTHO05D004813 1.5e-27 125.6 68 88.2
MD02G1267100 Malus domestica HOM05D000929 ORTHO05D004813 1.5e-27 125.6 68 92.6
GSVIVG01036887001 Vitis vinifera HOM05D000929 ORTHO05D004813 1.5e-27 125.6 68 86.8
CiPaw.11G074100 Carya illinoinensis HOM05D000929 ORTHO05D004813 2.0e-27 125.2 68 88.2
ClCG11G016100 Citrullus lanatus HOM05D000929 ORTHO05D004813 2.0e-27 125.2 68 88.2
TWI32G0464 Tripterygium wilfordii HOM05D000929 ORTHO05D004813 2.0e-27 125.2 68 89.7
TAR636G3540 Trochodendron aralioides HOM05D000929 ORTHO05D004813 2.0e-27 125.2 68 85.3
Duzib068G0752 Durio zibethinus HOM05D000929 ORTHO05D004813 2.6e-27 124.8 68 88.2
Gohir.A08G148700 Gossypium hirsutum HOM05D000929 ORTHO05D004813 2.6e-27 124.8 68 88.2
Sed0024593 Sechium edule HOM05D000929 ORTHO05D004813 2.6e-27 124.8 68 86.8
Manes.17G001200 Manihot esculenta HOM05D000929 ORTHO05D004813 3.4e-27 124.4 68 88.2
Sed0019322 Sechium edule HOM05D000929 ORTHO05D004813 3.4e-27 124.4 68 86.8
HanXRQChr13g0412771 Helianthus annuus HOM05D000929 ORTHO05D004813 4.4e-27 124.0 68 88.2
Cc08_g05960 Coffea canephora HOM05D000929 ORTHO05D004813 5.8e-27 123.6 68 86.8
MD07G1052000 Malus domestica HOM05D000929 ORTHO05D004813 5.8e-27 123.6 68 89.7
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 5.8e-27 123.6 68 89.7
MELO3C010526.2 Cucumis melo HOM05D000929 ORTHO05D004813 7.6e-27 123.2 68 86.8
Migut.A00470 Erythranthe guttata HOM05D000929 ORTHO05D004813 7.6e-27 123.2 68 86.8
SGA_v2.0_scaffold89G27371 Striga asiatica HOM05D000929 ORTHO05D004813 7.6e-27 123.2 68 86.8
Actinidia32793 Actinidia chinensis HOM05D000929 ORTHO05D004813 1.3e-26 122.5 68 86.8
EL10Ac5g12482 Beta vulgaris HOM05D000929 ORTHO05D004813 1.3e-26 122.5 68 86.8
DCAR_004536 Daucus carota HOM05D000929 ORTHO05D004813 1.3e-26 122.5 68 83.8
Gohir.D08G169800 Gossypium hirsutum HOM05D000929 ORTHO05D004813 1.3e-26 122.5 68 86.8
Gorai.004G177000 Gossypium raimondii HOM05D000929 ORTHO05D004813 1.3e-26 122.5 68 86.8
Lj8C361G1 Lonicera japonica HOM05D000929 ORTHO05D004813 1.3e-26 122.5 68 86.8
Nn1g08153 Nelumbo nucifera HOM05D000929 ORTHO05D004813 1.3e-26 122.5 68 86.8
Actinidia01247 Actinidia chinensis HOM05D000929 ORTHO05D004813 1.7e-26 122.1 68 85.3
Duzib205G0211 Durio zibethinus HOM05D000929 ORTHO05D004813 1.7e-26 122.1 68 85.3
Lsat_1_v5_gn_6_77000 Lactuca sativa HOM05D000929 ORTHO05D004813 1.7e-26 122.1 68 86.8
Lalb_Chr05g0215171 Lupinus albus HOM05D000929 ORTHO05D004813 1.7e-26 122.1 68 83.8
CAN.G998.9 Capsicum annuum HOM05D000929 ORTHO05D004813 2.2e-26 121.7 68 85.3
Hma1.2p1_0262F.1_g105380 Hydrangea macrophylla HOM05D000929 ORTHO05D004813 2.2e-26 121.7 68 83.8
Peaxi162Scf00053g00316 Petunia axillaris HOM05D000929 ORTHO05D004813 2.2e-26 121.7 68 85.3
PGR031G1573 Punica granatum HOM05D000929 ORTHO05D004813 2.2e-26 121.7 68 85.3
Sc22g0002840 Simmondsia chinensis HOM05D000929 ORTHO05D004813 2.2e-26 121.7 68 82.4
Solyc08g075310.4 Solanum lycopersicum HOM05D000929 ORTHO05D004813 2.2e-26 121.7 68 85.3
Sopen08g023910 Solanum pennellii HOM05D000929 ORTHO05D004813 2.2e-26 121.7 68 85.3
MSTRG.25749 Avicennia marina HOM05D000929 ORTHO05D004813 3.8e-26 120.9 68 83.8
CDE06G2377 Ceratophyllum demersum HOM05D000929 ORTHO05D004813 3.8e-26 120.9 68 82.4
ECA240G1531 Erigeron canadensis HOM05D000929 ORTHO05D004813 3.8e-26 120.9 68 86.8
Nitab4.5_0000986g0030 Nicotiana tabacum HOM05D000929 ORTHO05D004813 3.8e-26 120.9 68 85.3
Rhsim11G0037600 Rhododendron simsii HOM05D000929 ORTHO05D004813 3.8e-26 120.9 68 85.3
SGA_v2.0_scaffold96G29109 Striga asiatica HOM05D000929 ORTHO05D004813 3.8e-26 120.9 68 85.3
Aqoxy2G03914 Aquilegia oxysepala HOM05D000929 ORTHO05D004813 4.9e-26 120.6 68 85.3
Hund14936 Selenicereus undatus HOM05D000929 ORTHO05D004813 4.9e-26 120.6 68 83.8
vmacro00098 Vaccinium macrocarpon HOM05D000929 ORTHO05D004813 4.9e-26 120.6 68 85.3
Medtr8g072250 Medicago truncatula HOM05D000929 ORTHO05D004813 6.4e-26 120.2 68 85.3
Ah.02g115480 Amaranthus hybridus HOM05D000929 ORTHO05D004813 8.4e-26 119.8 68 85.3
arahy.Tifrunner.gnm1.ann1.C95Z0S Arachis hypogaea HOM05D000929 ORTHO05D004813 8.4e-26 119.8 68 82.4
arahy.Tifrunner.gnm1.ann1.HVM0CV Arachis hypogaea HOM05D000929 ORTHO05D004813 8.4e-26 119.8 68 82.4
Eucgr.E01151 Eucalyptus grandis HOM05D000929 ORTHO05D004813 8.4e-26 119.8 68 79.4
HanXRQChr03g0084681 Helianthus annuus HOM05D000929 ORTHO05D004813 8.4e-26 119.8 68 86.8
PSO017G4228 Papaver somniferum HOM05D000929 ORTHO05D004813 8.4e-26 119.8 68 85.3
THA.LOC104798531 Tarenaya hassleriana HOM05D000929 ORTHO05D004813 8.4e-26 119.8 68 83.8
AL1G45800 Arabidopsis lyrata HOM05D000929 ORTHO05D004813 1.1e-25 119.4 68 83.8
AT1G31730 Arabidopsis thaliana HOM05D000929 ORTHO05D004813 1.1e-25 119.4 68 83.8
CDE02G1294 Ceratophyllum demersum HOM05D000929 ORTHO05D004813 1.4e-25 119.0 68 80.9
Glyma.16G109200 Glycine max HOM05D000929 ORTHO05D004813 1.4e-25 119.0 68 83.8
Lsat_1_v5_gn_3_20441 Lactuca sativa HOM05D000929 ORTHO05D004813 1.4e-25 119.0 68 83.8
PSO063G0460 Papaver somniferum HOM05D000929 ORTHO05D004813 1.9e-25 118.6 68 83.8
Hund10896 Selenicereus undatus HOM05D000929 ORTHO05D004813 1.9e-25 118.6 68 82.4
Carub.0001s3003 Capsella rubella HOM05D000929 ORTHO05D004813 2.4e-25 118.2 68 83.8
Gohir.D12G203900 Gossypium hirsutum HOM05D000929 ORTHO05D004813 2.4e-25 118.2 68 83.8
Gorai.008G218700 Gossypium raimondii HOM05D000929 ORTHO05D004813 2.4e-25 118.2 68 83.8
SalBow4G0955 Salvia bowleyana HOM05D000929 ORTHO05D004813 2.4e-25 118.2 68 82.4
TPR.G14264 Trifolium pratense HOM05D000929 ORTHO05D004813 2.4e-25 118.2 68 83.8
Aa31LG9G15770 Aethionema arabicum HOM05D000929 ORTHO05D004813 3.2e-25 117.9 68 82.4
ATR0069G035 Amborella trichopoda HOM05D000929 ORTHO05D004813 3.2e-25 117.9 68 80.9
A09p34650 Brassica napus HOM05D000929 ORTHO05D004813 3.2e-25 117.9 68 83.8
C05p30850 Brassica napus HOM05D000929 ORTHO05D004813 3.2e-25 117.9 68 83.8
BraA09t38999Z Brassica rapa HOM05D000929 ORTHO05D004813 3.2e-25 117.9 68 83.8
Lalb_Chr09g0325051 Lupinus albus HOM05D000929 ORTHO05D004813 3.2e-25 117.9 68 79.4
Oeu023056.3 Olea europaea HOM05D000929 ORTHO05D004813 3.2e-25 117.9 68 80.9
Glyma.16G076500 Glycine max HOM05D000929 ORTHO05D004813 4.1e-25 117.5 68 82.4
Oeu046773.1 Olea europaea HOM05D000929 ORTHO05D004813 4.1e-25 117.5 68 80.9
THA.LOC104814388 Tarenaya hassleriana HOM05D000929 ORTHO05D004813 4.1e-25 117.5 68 79.4
BcaC05g27184 Brassica carinata HOM05D000929 ORTHO05D004813 5.4e-25 117.1 68 82.4
BolC5t31815H Brassica oleracea HOM05D000929 ORTHO05D004813 5.4e-25 117.1 68 82.4
Thhalv10006719m.g Eutrema salsugineum HOM05D000929 ORTHO05D004813 5.4e-25 117.1 68 82.4
Sp1g27400 Schrenkiella parvula HOM05D000929 ORTHO05D004813 5.4e-25 117.1 68 82.4
HPP92_006225 Vanilla planifolia HOM05D000929 ORTHO05D004813 5.4e-25 117.1 68 79.4
Glyma.01G153200 Glycine max HOM05D000929 ORTHO05D004813 7.1e-25 116.7 68 80.9
Lalb_Chr16g0391781 Lupinus albus HOM05D000929 ORTHO05D004813 7.1e-25 116.7 68 82.4
BcaB07g32818 Brassica carinata HOM05D000929 ORTHO05D004813 9.2e-25 116.3 68 82.4
CANSAT35G1067 Cannabis sativa HOM05D000929 ORTHO05D004813 9.2e-25 116.3 68 83.8
Ca_22458_v3 Cicer arietinum L. HOM05D000929 ORTHO05D004813 9.2e-25 116.3 68 80.9
Phvul.002G122300 Phaseolus vulgaris HOM05D000929 ORTHO05D004813 9.2e-25 116.3 68 79.4
VMungo1215G3448 Vigna mungo HOM05D000929 ORTHO05D004813 9.2e-25 116.3 68 79.4
CARHR031030 Cardamine hirsuta HOM05D000929 ORTHO05D004813 1.2e-24 115.9 68 80.9
Os01g0916200 Oryza sativa ssp. japonica HOM05D000929 ORTHO05D004813 1.2e-24 115.9 68 82.4
Zm00001eb364820 Zea mays HOM05D000929 ORTHO05D004813 2.1e-24 115.2 68 80.9
Gohir.A12G201100 Gossypium hirsutum HOM05D000929 ORTHO05D004813 2.7e-24 114.8 68 82.4
MSTRG.11858 Avicennia marina HOM05D000929 ORTHO05D004813 3.5e-24 114.4 68 80.9
Zm00001eb143480 Zea mays HOM05D000929 ORTHO05D004813 3.5e-24 114.4 68 80.9
Lj4g0001871 Lotus japonicus HOM05D000929 ORTHO05D004813 4.6e-24 114.0 68 79.4
SHI32765 Sapria himalayana HOM05D000929 ORTHO05D004813 4.6e-24 114.0 68 79.4
BcaC05g26656 Brassica carinata HOM05D000929 ORTHO05D004813 6.0e-24 113.6 68 79.4
Psat4g108000 Pisum sativum HOM05D000929 ORTHO05D004813 6.0e-24 113.6 68 79.4
Glyma.09G218500 Glycine max HOM05D000929 ORTHO05D004813 7.8e-24 113.2 68 77.9
BcaC05g26444 Brassica carinata HOM05D000929 ORTHO05D004813 3.0e-23 111.3 68 77.9
A09p39530 Brassica napus HOM05D000929 ORTHO05D004813 3.0e-23 111.3 68 77.9
C05p24930 Brassica napus HOM05D000929 ORTHO05D004813 3.0e-23 111.3 68 77.9
BolC5t31222H Brassica oleracea HOM05D000929 ORTHO05D004813 3.0e-23 111.3 68 77.9
BraA09t39452Z Brassica rapa HOM05D000929 ORTHO05D004813 3.0e-23 111.3 68 77.9
Prupe.2G018400 Prunus persica HOM05D000929 ORTHO05D004813 5.6e-22 107.1 75 80.0
FAN18G3633 Fragaria x ananassa HOM05D000929 ORTHO05D004813 7.3e-22 106.7 53 98.1
Pp3c12_18560 Physcomitrium patens HOM05D000929 ORTHO05D004813 4.0e-20 100.9 68 70.6
AagrBONN_evm.TU.Sc2ySwM_344.3572 Anthoceros agrestis HOM05D000929 ORTHO05D004813 8.9e-20 99.8 68 66.2
Pp3c12_14810 Physcomitrium patens HOM05D000929 ORTHO05D004813 8.9e-20 99.8 68 69.1
CsaV3_4G014930 Cucumis sativus L. HOM05D000929 ORTHO05D004813 1.5e-19 99.0 53 88.7
MBI07_g15664_MAGBIO Magnolia biondii HOM05D000929 ORTHO05D004813 1.5e-19 99.0 57 78.9
Mapoly0011s0004 Marchantia polymorpha HOM05D000929 ORTHO05D004813 9.9e-19 96.3 66 71.2
Mapoly0011s0005 Marchantia polymorpha HOM05D000929 ORTHO05D004813 9.9e-19 96.3 66 71.2
Cre06.g310000 Chlamydomonas reinhardtii HOM05D000929 ORTHO05D004813 4.9e-18 94.0 68 67.6
SMO117G0056 Selaginella moellendorffii HOM05D000929 ORTHO05D004813 4.9e-18 94.0 68 63.2
Prupe.2G057700 Prunus persica HOM05D000929 ORTHO05D004813 4.2e-17 90.9 56 76.8
MCO16G352 Micromonas commoda HOM05D000929 ORTHO05D004813 2.1e-16 88.6 68 66.2
CsaV3_UNG237520 Cucumis sativus L. HOM05D000929 ORTHO05D004813 6.6e-15 83.6 47 85.1
CBR_g31532 Chara braunii HOM05D000929 ORTHO05D004813 5.6e-14 80.5 68 55.9
PRCOL_00000608 Prasinoderma coloniale HOM05D000929 ORTHO05D004813 1.8e-12 75.5 68 47.1
AUR62030758 Chenopodium quinoa HOM05D000929 ORTHO05D004813 1.8e-07 58.9 68 51.5
AUR62036405 Chenopodium quinoa HOM05D000929 ORTHO05D004813 1.8e-07 58.9 68 51.5
MSTRG.13916 Avicennia marina HOM05D000929 ORTHO05D004813 2.3e-07 58.5 35 77.1


User provided reference genes

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